RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
AP001042.1-201ENST00000416842 WWC3Q9ULE0 1092 aa10.47□□□□□ -0.73
AP001042.1-201ENST00000416842 C4BP0C0L5 1744 aa10.47□□□□□ -0.73
AP001042.1-201ENST00000416842 KIAA1551Q9HCM1 1747 aa10.47□□□□□ -0.73
AP001042.1-201ENST00000416842 EXOSC9Q06265 439 aaKnown RBP10.46□□□□□ -0.73
AP001042.1-201ENST00000416842 DCTN1Q14203 1278 aa10.46□□□□□ -0.73
AP001042.1-201ENST00000416842 AKAP4Q5JQC9 854 aa10.46□□□□□ -0.73
AP001042.1-201ENST00000416842 COL13A1Q5TAT6 717 aaPredicted RBP10.46□□□□□ -0.73
AP001042.1-201ENST00000416842 MBIPQ9NS73 344 aa10.46□□□□□ -0.73
AP001042.1-201ENST00000416842 N4BP2Q86UW6 1770 aaPredicted RBP10.46□□□□□ -0.74
AP001042.1-201ENST00000416842 ITGB4P16144 1822 aa10.46□□□□□ -0.74
AP001042.1-201ENST00000416842 KIF13BQ9NQT8 1826 aa10.46□□□□□ -0.74
AP001042.1-201ENST00000416842 ABCB7O75027 752 aa10.45□□□□□ -0.74
AP001042.1-201ENST00000416842 VAMP4O75379 141 aa10.45□□□□□ -0.74
AP001042.1-201ENST00000416842 FKBP8Q14318 412 aa10.45□□□□□ -0.74
AP001042.1-201ENST00000416842 MCM10Q7L590 875 aa10.45□□□□□ -0.74
AP001042.1-201ENST00000416842 TSR2Q969E8 191 aaKnown RBP10.45□□□□□ -0.74
AP001042.1-201ENST00000416842 MEGF6O75095 1541 aa10.44□□□□□ -0.74
AP001042.1-201ENST00000416842 DLG5Q8TDM6 1919 aa10.43□□□□□ -0.74
AP001042.1-201ENST00000416842 BRCA1P38398 1863 aaKnown RBP10.43□□□□□ -0.74
AP001042.1-201ENST00000416842 BCAR3O75815 825 aa10.43□□□□□ -0.74
AP001042.1-201ENST00000416842 TOMM70O94826 608 aa10.43□□□□□ -0.74
AP001042.1-201ENST00000416842 NKX1-1Q15270 411 aaPredicted RBP10.43□□□□□ -0.74
AP001042.1-201ENST00000416842 TAF7Q15545 349 aaPredicted RBP10.43□□□□□ -0.74
AP001042.1-201ENST00000416842 ALDH1L2Q3SY69 923 aa10.43□□□□□ -0.74
AP001042.1-201ENST00000416842 RTF1Q92541 710 aaKnown RBP10.43□□□□□ -0.74
AP001042.1-201ENST00000416842 LGR6Q9HBX8 967 aa10.43□□□□□ -0.74
AP001042.1-201ENST00000416842 PKD1L3Q7Z443 1732 aa10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 RNMTO43148 476 aaKnown RBP10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 NEFLP07196 543 aa10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 PDE3AQ14432 1141 aa10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 ZNF530Q6P9A1 599 aaPredicted RBP10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 AMIGO3Q86WK7 504 aa10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 TSPYL6Q8N831 410 aa10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 C8orf58Q8NAV2 365 aa10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 FLAD1Q8NFF5 587 aa10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 ZCRB1Q8TBF4 217 aaKnown RBP10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 RAPGEF4Q8WZA2 1011 aa10.42□□□□□ -0.74
AP001042.1-201ENST00000416842 SOS1Q07889 1333 aaPredicted RBP10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 CYP27B1O15528 508 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 SLC4A2P04920 1241 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 PHKG2P15735 406 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 PRELPP51888 382 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 HTRA3P83110 453 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 JMYQ8N9B5 988 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 SSH1Q8WYL5 1049 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 KLRG1Q96E93 195 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 NMRK2Q9NPI5 230 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 SPG7Q9UQ90 795 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 ADAMTS7Q9UKP4 1686 aa10.41□□□□□ -0.74
AP001042.1-201ENST00000416842 HEG1Q9ULI3 1381 aa10.4□□□□□ -0.74
AP001042.1-201ENST00000416842 ARFGEF1Q9Y6D6 1849 aa10.4□□□□□ -0.74
AP001042.1-201ENST00000416842 PLIN1O60240 522 aa10.4□□□□□ -0.74
AP001042.1-201ENST00000416842 SMIM5Q71RC9 77 aa10.4□□□□□ -0.74
AP001042.1-201ENST00000416842 TNS4Q8IZW8 715 aa10.4□□□□□ -0.74
AP001042.1-201ENST00000416842 RBM42Q9BTD8 480 aaKnown RBP10.4□□□□□ -0.74
AP001042.1-201ENST00000416842 PALLDQ8WX93 1383 aa10.39□□□□□ -0.75
AP001042.1-201ENST00000416842 PXDNLA1KZ92 1463 aa10.39□□□□□ -0.75
AP001042.1-201ENST00000416842 C20orf194Q5TEA3 1177 aa10.39□□□□□ -0.75
AP001042.1-201ENST00000416842 IFNL2Q8IZJ0 200 aa10.39□□□□□ -0.75
AP001042.1-201ENST00000416842 MRPL50Q8N5N7 158 aaKnown RBP10.39□□□□□ -0.75
AP001042.1-201ENST00000416842 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.39□□□□□ -0.75
AP001042.1-201ENST00000416842 ARHGAP45Q92619 1136 aa10.39□□□□□ -0.75
AP001042.1-201ENST00000416842 PPP4R2Q9NY27 417 aa10.39□□□□□ -0.75
AP001042.1-201ENST00000416842 SBF1O95248 1867 aa10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 PHF14O94880 888 aa10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 EIF4A1P60842 406 aaKnown RBP10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 IRX6P78412 446 aaPredicted RBP10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 TWISTNBQ3B726 338 aaPredicted RBP10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 C1orf141Q5JVX7 400 aa10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 MPRIPQ6WCQ1 1025 aa10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 DCAF5Q96JK2 942 aa10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 AK7Q96M32 723 aa10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 MIS18AQ9NYP9 233 aa10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 LAS1LQ9Y4W2 734 aaKnown RBP10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 TNRC6CQ9HCJ0 1690 aaKnown RBP10.38□□□□□ -0.75
AP001042.1-201ENST00000416842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.37□□□□□ -0.75
AP001042.1-201ENST00000416842 KDM6AO15550 1401 aaPredicted RBP10.37□□□□□ -0.75
AP001042.1-201ENST00000416842 HSP90AB1P08238 724 aaKnown RBP10.37□□□□□ -0.75
AP001042.1-201ENST00000416842 HOXB7P09629 217 aa10.37□□□□□ -0.75
AP001042.1-201ENST00000416842 TSPYL4Q9UJ04 414 aa10.37□□□□□ -0.75
AP001042.1-201ENST00000416842 ERVV-2B6SEH9 535 aa10.36□□□□□ -0.75
AP001042.1-201ENST00000416842 KRT24Q2M2I5 525 aa10.36□□□□□ -0.75
AP001042.1-201ENST00000416842 EXOC6Q8TAG9 804 aa10.36□□□□□ -0.75
AP001042.1-201ENST00000416842 SLC52A2Q9HAB3 445 aa10.36□□□□□ -0.75
AP001042.1-201ENST00000416842 RLBP1P12271 317 aa10.35□□□□□ -0.75
AP001042.1-201ENST00000416842 HMGB2P26583 209 aaKnown RBP10.35□□□□□ -0.75
AP001042.1-201ENST00000416842 FSTL1Q12841 308 aa10.35□□□□□ -0.75
AP001042.1-201ENST00000416842 BCS1LQ9Y276 419 aa10.35□□□□□ -0.75
AP001042.1-201ENST00000416842 KCPQ6ZWJ8 1503 aa10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 C4AP0C0L4 1744 aa10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 KCNQ3O43525 872 aa10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 SSFA2P28290 1259 aa10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 AAMPQ13685 434 aa10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 ATF7IPQ6VMQ6 1270 aa10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 ARHGAP27Q6ZUM4 889 aa10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 C16orf71Q8IYS4 520 aaPredicted RBP10.34□□□□□ -0.75
AP001042.1-201ENST00000416842 CRBNQ96SW2 442 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms