RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 AEBP1Q8IUX7 1158 aa17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 ARHGAP45Q92619 1136 aa17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 DNAJC5Q9H3Z4 198 aa17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 ABCC4O15439 1325 aa17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 TTC21BQ7Z4L5 1316 aa17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 CCDC66A2RUB6 948 aa17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 TNNT1P13805 278 aa17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 MCM2P49736 904 aa17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 HSP90AB2PQ58FF8 381 aa17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 API5Q9BZZ5 524 aaKnown RBP17.62■□□□□ 0.41
NCKIPSD-204ENST00000416649 RILPL2Q969X0 211 aa17.61■□□□□ 0.41
NCKIPSD-204ENST00000416649 TCHHQ07283 1943 aa17.61■□□□□ 0.41
NCKIPSD-204ENST00000416649 TRIM6-TRIM34B2RNG4 842 aa17.61■□□□□ 0.41
NCKIPSD-204ENST00000416649 CUL4AQ13619 759 aa17.61■□□□□ 0.41
NCKIPSD-204ENST00000416649 CCDC112Q8NEF3 446 aa17.61■□□□□ 0.41
NCKIPSD-204ENST00000416649 DDX41Q9UJV9 622 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-204ENST00000416649 RIMS1Q86UR5 1692 aaKnown RBP17.61■□□□□ 0.41
NCKIPSD-204ENST00000416649 FAM135BQ49AJ0 1406 aa17.61■□□□□ 0.41
NCKIPSD-204ENST00000416649 ATP7BP35670 1465 aa17.6■□□□□ 0.41
NCKIPSD-204ENST00000416649 CCDC186Q7Z3E2 898 aa17.6■□□□□ 0.41
NCKIPSD-204ENST00000416649 LTV1Q96GA3 475 aaPredicted RBP17.6■□□□□ 0.41
NCKIPSD-204ENST00000416649 MIS18AQ9NYP9 233 aa17.6■□□□□ 0.41
NCKIPSD-204ENST00000416649 CPSF1Q10570 1443 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-204ENST00000416649 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.6■□□□□ 0.41
NCKIPSD-204ENST00000416649 EDC4Q6P2E9 1401 aaKnown RBP17.6■□□□□ 0.41
NCKIPSD-204ENST00000416649 LMOD2Q6P5Q4 547 aa17.6■□□□□ 0.41
NCKIPSD-204ENST00000416649 C8orf58Q8NAV2 365 aa17.6■□□□□ 0.41
NCKIPSD-204ENST00000416649 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
NCKIPSD-204ENST00000416649 NPHP1O15259 732 aa17.59■□□□□ 0.41
NCKIPSD-204ENST00000416649 ZNF428Q96B54 188 aa17.59■□□□□ 0.41
NCKIPSD-204ENST00000416649 TIGD1Q96MW7 591 aa17.59■□□□□ 0.41
NCKIPSD-204ENST00000416649 TERF2Q15554 542 aa17.59■□□□□ 0.41
NCKIPSD-204ENST00000416649 TPM3P06753 285 aa17.58■□□□□ 0.41
NCKIPSD-204ENST00000416649 NECTIN2Q92692 538 aa17.58■□□□□ 0.41
NCKIPSD-204ENST00000416649 NLRP6P59044 892 aa17.58■□□□□ 0.4
NCKIPSD-204ENST00000416649 UBE2HP62256 183 aa17.58■□□□□ 0.4
NCKIPSD-204ENST00000416649 ANKRD44Q8N8A2 993 aa17.58■□□□□ 0.4
NCKIPSD-204ENST00000416649 INTS4Q96HW7 963 aaKnown RBP17.58■□□□□ 0.4
NCKIPSD-204ENST00000416649 USP32Q8NFA0 1604 aa17.58■□□□□ 0.4
NCKIPSD-204ENST00000416649 TPD52L1Q16890 204 aaPredicted RBP17.58■□□□□ 0.4
NCKIPSD-204ENST00000416649 SULT6B1Q6IMI4 303 aa17.58■□□□□ 0.4
NCKIPSD-204ENST00000416649 KRT222Q8N1A0 295 aa17.58■□□□□ 0.4
NCKIPSD-204ENST00000416649 MAP2P11137 1827 aaKnown RBP17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 TECPR2O15040 1411 aa17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 SMTNL1A8MU46 457 aa17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 BRPF1P55201 1214 aaPredicted RBP17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 KIF18AQ8NI77 898 aa17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 ST7Q9NRC1 585 aa17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 NRBP1Q9UHY1 535 aa17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 CAMK4Q16566 473 aa17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 CEP85Q6P2H3 762 aa17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 SIRT1Q96EB6 747 aa17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 PTCH1Q13635 1447 aa17.57■□□□□ 0.4
NCKIPSD-204ENST00000416649 IL13P35225 146 aa17.56■□□□□ 0.4
NCKIPSD-204ENST00000416649 RTF1Q92541 710 aaKnown RBP17.56■□□□□ 0.4
NCKIPSD-204ENST00000416649 GNAI1P63096 354 aa17.56■□□□□ 0.4
NCKIPSD-204ENST00000416649 LUZP1Q86V48 1076 aa17.56■□□□□ 0.4
NCKIPSD-204ENST00000416649 ESYT1Q9BSJ8 1104 aa17.56■□□□□ 0.4
NCKIPSD-204ENST00000416649 PDE1AP54750 535 aa17.55■□□□□ 0.4
NCKIPSD-204ENST00000416649 ESCO1Q5FWF5 840 aa17.55■□□□□ 0.4
NCKIPSD-204ENST00000416649 PIK3R4Q99570 1358 aa17.55■□□□□ 0.4
NCKIPSD-204ENST00000416649 SLC4A10Q6U841 1118 aa17.55■□□□□ 0.4
NCKIPSD-204ENST00000416649 MEIS3Q99687 375 aa17.55■□□□□ 0.4
NCKIPSD-204ENST00000416649 TRIM5Q9C035 493 aa17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 COL3A1P02461 1466 aaPredicted RBP17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 FCHSD2O94868 740 aa17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 EIF4A2Q14240 407 aaKnown RBP17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 ABTB2Q8N961 1025 aa17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 MORC2Q9Y6X9 1032 aaPredicted RBP17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 ZSCAN22P10073 491 aaPredicted RBP17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 HSPA2P54652 639 aa17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 RPAP2Q8IXW5 612 aaPredicted RBP17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 EXOC6BQ9Y2D4 811 aa17.54■□□□□ 0.4
NCKIPSD-204ENST00000416649 AMPHP49418 695 aa17.53■□□□□ 0.4
NCKIPSD-204ENST00000416649 CERS3Q8IU89 383 aa17.53■□□□□ 0.4
NCKIPSD-204ENST00000416649 PLEKHG3A1L390 1219 aa17.53■□□□□ 0.4
NCKIPSD-204ENST00000416649 DNM1Q05193 864 aaKnown RBP17.53■□□□□ 0.4
NCKIPSD-204ENST00000416649 TRIM34Q9BYJ4 488 aa17.53■□□□□ 0.4
NCKIPSD-204ENST00000416649 STX6O43752 255 aa17.52■□□□□ 0.4
NCKIPSD-204ENST00000416649 CKAP2LQ8IYA6 745 aa17.52■□□□□ 0.4
NCKIPSD-204ENST00000416649 KIF20BQ96Q89 1820 aa17.52■□□□□ 0.4
NCKIPSD-204ENST00000416649 SYT1P21579 422 aa17.52■□□□□ 0.4
NCKIPSD-204ENST00000416649 NFE2L2Q16236 605 aa17.52■□□□□ 0.4
NCKIPSD-204ENST00000416649 KMT5BQ4FZB7 885 aa17.52■□□□□ 0.4
NCKIPSD-204ENST00000416649 FUCA2Q9BTY2 467 aa17.52■□□□□ 0.4
NCKIPSD-204ENST00000416649 DNAJC2Q99543 621 aaKnown RBP17.51■□□□□ 0.39
NCKIPSD-204ENST00000416649 PNPLA6Q8IY17 1366 aa17.51■□□□□ 0.39
NCKIPSD-204ENST00000416649 ARHGAP23Q9P227 1491 aa17.51■□□□□ 0.39
NCKIPSD-204ENST00000416649 ZNF215Q9UL58 517 aaPredicted RBP17.51■□□□□ 0.39
NCKIPSD-204ENST00000416649 CDC42BPGQ6DT37 1551 aa17.51■□□□□ 0.39
NCKIPSD-204ENST00000416649 CEP170BQ9Y4F5 1589 aaPredicted RBP17.51■□□□□ 0.39
NCKIPSD-204ENST00000416649 FOXO3O43524 673 aa17.51■□□□□ 0.39
NCKIPSD-204ENST00000416649 CALCOCO1Q9P1Z2 691 aa17.51■□□□□ 0.39
NCKIPSD-204ENST00000416649 SMC3Q9UQE7 1217 aa17.51■□□□□ 0.39
NCKIPSD-204ENST00000416649 SLIT1O75093 1534 aa17.5■□□□□ 0.39
NCKIPSD-204ENST00000416649 USP6P35125 1406 aa17.5■□□□□ 0.39
NCKIPSD-204ENST00000416649 MAP3K19Q56UN5 1328 aa17.5■□□□□ 0.39
NCKIPSD-204ENST00000416649 RGPD8O14715 1765 aaPredicted RBP17.5■□□□□ 0.39
NCKIPSD-204ENST00000416649 VPS37CA5D8V6 355 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms