RNA–Protein interactions for RNA: ENST00000416242.2

LINC01388-201, Transcript of long intergenic non-protein coding RNA 1388, humanhuman

TSL 3 BASIC

Gene LINC01388, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01388-201ENST00000416242 PARP3Q9Y6F1 533 aa18.83■□□□□ 0.6
LINC01388-201ENST00000416242 SNRPA1P09661 255 aaKnown RBP18.82■□□□□ 0.6
LINC01388-201ENST00000416242 DCTN1Q14203 1278 aa18.82■□□□□ 0.6
LINC01388-201ENST00000416242 NARFQ9UHQ1 456 aa18.82■□□□□ 0.6
LINC01388-201ENST00000416242 UBR2Q8IWV8 1755 aa18.82■□□□□ 0.6
LINC01388-201ENST00000416242 GRIN3BO60391 1043 aa18.81■□□□□ 0.6
LINC01388-201ENST00000416242 YY1P25490 414 aa18.81■□□□□ 0.6
LINC01388-201ENST00000416242 ZNF316A6NFI3 1004 aaPredicted RBP18.8■□□□□ 0.6
LINC01388-201ENST00000416242 CANXP27824 592 aaKnown RBP18.8■□□□□ 0.6
LINC01388-201ENST00000416242 IL6STP40189 918 aaPredicted RBP18.8■□□□□ 0.6
LINC01388-201ENST00000416242 EIF5P55010 431 aaKnown RBP18.8■□□□□ 0.6
LINC01388-201ENST00000416242 SRP68Q9UHB9 627 aaKnown RBP18.8■□□□□ 0.6
LINC01388-201ENST00000416242 SIPA1L3O60292 1781 aaPredicted RBP18.79■□□□□ 0.6
LINC01388-201ENST00000416242 TGFB2P61812 414 aa18.79■□□□□ 0.6
LINC01388-201ENST00000416242 FKBP8Q14318 412 aa18.79■□□□□ 0.6
LINC01388-201ENST00000416242 C10orf71Q711Q0 1435 aa18.78■□□□□ 0.6
LINC01388-201ENST00000416242 KCNQ3O43525 872 aa18.78■□□□□ 0.6
LINC01388-201ENST00000416242 RIPK4P57078 832 aa18.78■□□□□ 0.6
LINC01388-201ENST00000416242 USPL1Q5W0Q7 1092 aa18.78■□□□□ 0.6
LINC01388-201ENST00000416242 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
LINC01388-201ENST00000416242 RUNDC1Q96C34 613 aa18.78■□□□□ 0.6
LINC01388-201ENST00000416242 MYH14Q7Z406 1995 aaKnown RBP18.78■□□□□ 0.6
LINC01388-201ENST00000416242 TMPOP42166 694 aaKnown RBP18.77■□□□□ 0.6
LINC01388-201ENST00000416242 BABAM1Q9NWV8 329 aa18.77■□□□□ 0.6
LINC01388-201ENST00000416242 VIRMAQ69YN4 1812 aaKnown RBP18.76■□□□□ 0.59
LINC01388-201ENST00000416242 C4AP0C0L4 1744 aa18.75■□□□□ 0.59
LINC01388-201ENST00000416242 TM4SF1P30408 202 aa18.75■□□□□ 0.59
LINC01388-201ENST00000416242 POLRMTO00411 1230 aaKnown RBP18.74■□□□□ 0.59
LINC01388-201ENST00000416242 ADAMTS8Q9UP79 889 aa18.74■□□□□ 0.59
LINC01388-201ENST00000416242 USP16Q9Y5T5 823 aa18.74■□□□□ 0.59
LINC01388-201ENST00000416242 RGL2O15211 777 aa18.73■□□□□ 0.59
LINC01388-201ENST00000416242 A1BGP04217 495 aa18.73■□□□□ 0.59
LINC01388-201ENST00000416242 YBX3P16989 372 aaKnown RBP eCLIP18.73■□□□□ 0.59
LINC01388-201ENST00000416242 DDR1Q08345 913 aa18.73■□□□□ 0.59
LINC01388-201ENST00000416242 THUMPD2Q9BTF0 503 aaKnown RBP18.73■□□□□ 0.59
LINC01388-201ENST00000416242 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
LINC01388-201ENST00000416242 NFIXQ14938 502 aa18.72■□□□□ 0.59
LINC01388-201ENST00000416242 TSPYL4Q9UJ04 414 aa18.72■□□□□ 0.59
LINC01388-201ENST00000416242 PXDNLA1KZ92 1463 aa18.71■□□□□ 0.59
LINC01388-201ENST00000416242 GIGYF1O75420 1035 aaPredicted RBP18.71■□□□□ 0.59
LINC01388-201ENST00000416242 EIF4A1P60842 406 aaKnown RBP18.71■□□□□ 0.59
LINC01388-201ENST00000416242 CCDC146Q8IYE0 955 aa18.71■□□□□ 0.59
LINC01388-201ENST00000416242 BCL2L12Q9HB09 334 aa18.71■□□□□ 0.59
LINC01388-201ENST00000416242 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.59
LINC01388-201ENST00000416242 ZNF652Q9Y2D9 606 aa18.71■□□□□ 0.59
LINC01388-201ENST00000416242 UTRNP46939 3433 aa18.7■□□□□ 0.58
LINC01388-201ENST00000416242 ANP32CO43423 234 aa18.7■□□□□ 0.58
LINC01388-201ENST00000416242 DZIP3Q86Y13 1208 aaKnown RBP18.7■□□□□ 0.58
LINC01388-201ENST00000416242 PRAMEF22A3QJZ6 481 aa18.69■□□□□ 0.58
LINC01388-201ENST00000416242 CLEC4GQ6UXB4 293 aa18.69■□□□□ 0.58
LINC01388-201ENST00000416242 TBC1D2BQ9UPU7 963 aa18.69■□□□□ 0.58
LINC01388-201ENST00000416242 ERBB4Q15303 1308 aa18.69■□□□□ 0.58
LINC01388-201ENST00000416242 CARMIL3Q8ND23 1372 aa18.68■□□□□ 0.58
LINC01388-201ENST00000416242 CAMTA2O94983 1202 aa18.68■□□□□ 0.58
LINC01388-201ENST00000416242 SERPINB2P05120 415 aa18.67■□□□□ 0.58
LINC01388-201ENST00000416242 CALD1Q05682 793 aaKnown RBP18.67■□□□□ 0.58
LINC01388-201ENST00000416242 NEUROD2Q15784 382 aa18.67■□□□□ 0.58
LINC01388-201ENST00000416242 RRP7AQ9Y3A4 280 aaKnown RBP18.67■□□□□ 0.58
LINC01388-201ENST00000416242 A0A0G2JLW4 131 aa18.66■□□□□ 0.58
LINC01388-201ENST00000416242 DPEP1P16444 411 aa18.66■□□□□ 0.58
LINC01388-201ENST00000416242 SETDB2Q96T68 719 aa18.66■□□□□ 0.58
LINC01388-201ENST00000416242 PIM2Q9P1W9 311 aa18.66■□□□□ 0.58
LINC01388-201ENST00000416242 PDZRN3Q9UPQ7 1066 aa18.66■□□□□ 0.58
LINC01388-201ENST00000416242 KIF13BQ9NQT8 1826 aa18.65■□□□□ 0.58
LINC01388-201ENST00000416242 NBPF26B4DH59 902 aa18.65■□□□□ 0.58
LINC01388-201ENST00000416242 TBC1D9BQ66K14 1250 aa18.65■□□□□ 0.58
LINC01388-201ENST00000416242 NBPF10Q6P3W6 841 aaKnown RBP18.65■□□□□ 0.58
LINC01388-201ENST00000416242 NBPF15Q8N660 670 aa18.65■□□□□ 0.58
LINC01388-201ENST00000416242 TRIM35Q9UPQ4 493 aa18.65■□□□□ 0.58
LINC01388-201ENST00000416242 CHL1O00533 1208 aa18.64■□□□□ 0.57
LINC01388-201ENST00000416242 BICDL1Q6ZP65 573 aa18.64■□□□□ 0.57
LINC01388-201ENST00000416242 BCS1LQ9Y276 419 aa18.64■□□□□ 0.57
LINC01388-201ENST00000416242 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
LINC01388-201ENST00000416242 KDM3BQ7LBC6 1761 aa18.63■□□□□ 0.57
LINC01388-201ENST00000416242 PIP4K2AP48426 406 aaPredicted RBP18.63■□□□□ 0.57
LINC01388-201ENST00000416242 ZNF784Q8NCA9 323 aaPredicted RBP18.63■□□□□ 0.57
LINC01388-201ENST00000416242 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
LINC01388-201ENST00000416242 ERVV-1B6SEH8 477 aa18.62■□□□□ 0.57
LINC01388-201ENST00000416242 NPHP1O15259 732 aa18.62■□□□□ 0.57
LINC01388-201ENST00000416242 DALRD3Q5D0E6 543 aaKnown RBP18.62■□□□□ 0.57
LINC01388-201ENST00000416242 CNBD1Q8NA66 436 aa18.62■□□□□ 0.57
LINC01388-201ENST00000416242 CFAP44Q96MT7 982 aa18.62■□□□□ 0.57
LINC01388-201ENST00000416242 BRIP1Q9BX63 1249 aa18.62■□□□□ 0.57
LINC01388-201ENST00000416242 GOLGB1Q14789 3259 aaKnown RBP18.61■□□□□ 0.57
LINC01388-201ENST00000416242 APAF1O14727 1248 aa18.61■□□□□ 0.57
LINC01388-201ENST00000416242 HOXB7P09629 217 aa18.61■□□□□ 0.57
LINC01388-201ENST00000416242 KCNA3P22001 575 aa18.61■□□□□ 0.57
LINC01388-201ENST00000416242 PDE6BP35913 854 aa18.61■□□□□ 0.57
LINC01388-201ENST00000416242 ST5P78524 1137 aa18.61■□□□□ 0.57
LINC01388-201ENST00000416242 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
LINC01388-201ENST00000416242 WWC3Q9ULE0 1092 aa18.61■□□□□ 0.57
LINC01388-201ENST00000416242 MRS2Q9HD23 443 aa18.6■□□□□ 0.57
LINC01388-201ENST00000416242 LAMB4A4D0S4 1761 aa18.6■□□□□ 0.57
LINC01388-201ENST00000416242 H0YIN7 160 aa18.59■□□□□ 0.57
LINC01388-201ENST00000416242 PRR5LQ6MZQ0 368 aa18.59■□□□□ 0.57
LINC01388-201ENST00000416242 LAS1LQ9Y4W2 734 aaKnown RBP18.59■□□□□ 0.57
LINC01388-201ENST00000416242 NRXN2Q9P2S2 1712 aa18.59■□□□□ 0.57
LINC01388-201ENST00000416242 MAP3K15Q6ZN16 1313 aa18.58■□□□□ 0.57
LINC01388-201ENST00000416242 CHRNA5P30532 468 aa18.58■□□□□ 0.56
LINC01388-201ENST00000416242 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms