RNA–Protein interactions for RNA: ENST00000416104.5

LINC00222-202, long intergenic non-protein coding RNA 222, humanhuman

TSL 1 (best) BASIC

Gene LINC00222, Length 1,785 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00222-202ENST00000416104 CHD4Q14839 1912 aa15.31■□□□□ 0.04
LINC00222-202ENST00000416104 A0A0G2JLW4 131 aa15.31■□□□□ 0.04
LINC00222-202ENST00000416104 TM4SF1P30408 202 aa15.31■□□□□ 0.04
LINC00222-202ENST00000416104 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
LINC00222-202ENST00000416104 COL15A1P39059 1388 aa15.31■□□□□ 0.04
LINC00222-202ENST00000416104 UTRNP46939 3433 aa15.3■□□□□ 0.04
LINC00222-202ENST00000416104 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
LINC00222-202ENST00000416104 MCM10Q7L590 875 aa15.3■□□□□ 0.04
LINC00222-202ENST00000416104 C10orf71Q711Q0 1435 aa15.3■□□□□ 0.04
LINC00222-202ENST00000416104 EIF5P55010 431 aaKnown RBP15.29■□□□□ 0.04
LINC00222-202ENST00000416104 DDR1Q08345 913 aa15.29■□□□□ 0.04
LINC00222-202ENST00000416104 BCS1LQ9Y276 419 aa15.29■□□□□ 0.04
LINC00222-202ENST00000416104 PXDNLA1KZ92 1463 aa15.28■□□□□ 0.04
LINC00222-202ENST00000416104 C4AP0C0L4 1744 aa15.28■□□□□ 0.04
LINC00222-202ENST00000416104 POLRMTO00411 1230 aaKnown RBP15.28■□□□□ 0.04
LINC00222-202ENST00000416104 KCNQ3O43525 872 aa15.28■□□□□ 0.04
LINC00222-202ENST00000416104 DPEP1P16444 411 aa15.28■□□□□ 0.04
LINC00222-202ENST00000416104 IL6STP40189 918 aaPredicted RBP15.27■□□□□ 0.04
LINC00222-202ENST00000416104 DCTN1Q14203 1278 aa15.27■□□□□ 0.04
LINC00222-202ENST00000416104 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.04
LINC00222-202ENST00000416104 VIRMAQ69YN4 1812 aaKnown RBP15.27■□□□□ 0.04
LINC00222-202ENST00000416104 NFIXQ14938 502 aa15.26■□□□□ 0.03
LINC00222-202ENST00000416104 PIM2Q9P1W9 311 aa15.26■□□□□ 0.03
LINC00222-202ENST00000416104 ZNF330Q9Y3S2 320 aaPredicted RBP15.26■□□□□ 0.03
LINC00222-202ENST00000416104 MAPK8IP3Q9UPT6 1336 aa15.26■□□□□ 0.03
LINC00222-202ENST00000416104 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
LINC00222-202ENST00000416104 SNRPA1P09661 255 aaKnown RBP15.26■□□□□ 0.03
LINC00222-202ENST00000416104 PLEKHF1Q96S99 279 aa15.26■□□□□ 0.03
LINC00222-202ENST00000416104 A1BGP04217 495 aa15.25■□□□□ 0.03
LINC00222-202ENST00000416104 SERPINB2P05120 415 aa15.25■□□□□ 0.03
LINC00222-202ENST00000416104 PNISRQ8TF01 805 aaKnown RBP15.25■□□□□ 0.03
LINC00222-202ENST00000416104 BCL2L12Q9HB09 334 aa15.25■□□□□ 0.03
LINC00222-202ENST00000416104 KCNA3P22001 575 aa15.24■□□□□ 0.03
LINC00222-202ENST00000416104 NFE2L2Q16236 605 aa15.24■□□□□ 0.03
LINC00222-202ENST00000416104 TBC1D2BQ9UPU7 963 aa15.24■□□□□ 0.03
LINC00222-202ENST00000416104 USP16Q9Y5T5 823 aa15.24■□□□□ 0.03
LINC00222-202ENST00000416104 GOLGB1Q14789 3259 aaKnown RBP15.24■□□□□ 0.03
LINC00222-202ENST00000416104 BICDL1Q6ZP65 573 aa15.24■□□□□ 0.03
LINC00222-202ENST00000416104 ARHGAP27Q6ZUM4 889 aa15.24■□□□□ 0.03
LINC00222-202ENST00000416104 KIF13BQ9NQT8 1826 aa15.23■□□□□ 0.03
LINC00222-202ENST00000416104 GIGYF1O75420 1035 aaPredicted RBP15.23■□□□□ 0.03
LINC00222-202ENST00000416104 DALRD3Q5D0E6 543 aaKnown RBP15.23■□□□□ 0.03
LINC00222-202ENST00000416104 SIPA1L3O60292 1781 aaPredicted RBP15.23■□□□□ 0.03
LINC00222-202ENST00000416104 MYBBP1AQ9BQG0 1328 aaKnown RBP15.22■□□□□ 0.03
LINC00222-202ENST00000416104 CHRNA5P30532 468 aa15.21■□□□□ 0.03
LINC00222-202ENST00000416104 DZIP3Q86Y13 1208 aaKnown RBP15.21■□□□□ 0.03
LINC00222-202ENST00000416104 MIS18AQ9NYP9 233 aa15.21■□□□□ 0.03
LINC00222-202ENST00000416104 C1QTNF8P60827 252 aa15.21■□□□□ 0.02
LINC00222-202ENST00000416104 TBC1D9BQ66K14 1250 aa15.21■□□□□ 0.02
LINC00222-202ENST00000416104 GPBP1L1Q9HC44 474 aaPredicted RBP15.21■□□□□ 0.02
LINC00222-202ENST00000416104 ATP10DQ9P241 1426 aa15.21■□□□□ 0.02
LINC00222-202ENST00000416104 PRAMEF22A3QJZ6 481 aa15.2■□□□□ 0.02
LINC00222-202ENST00000416104 SETDB2Q96T68 719 aa15.2■□□□□ 0.02
LINC00222-202ENST00000416104 N4BP2Q86UW6 1770 aaPredicted RBP15.2■□□□□ 0.02
LINC00222-202ENST00000416104 H0YIN7 160 aa15.19■□□□□ 0.02
LINC00222-202ENST00000416104 NPHP1O15259 732 aa15.19■□□□□ 0.02
LINC00222-202ENST00000416104 CAMTA2O94983 1202 aa15.19■□□□□ 0.02
LINC00222-202ENST00000416104 PIP4K2AP48426 406 aaPredicted RBP15.19■□□□□ 0.02
LINC00222-202ENST00000416104 RIPK4P57078 832 aa15.19■□□□□ 0.02
LINC00222-202ENST00000416104 ADCY9O60503 1353 aa15.18■□□□□ 0.02
LINC00222-202ENST00000416104 KIAA1551Q9HCM1 1747 aa15.18■□□□□ 0.02
LINC00222-202ENST00000416104 LMOD3Q0VAK6 560 aa15.18■□□□□ 0.02
LINC00222-202ENST00000416104 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
LINC00222-202ENST00000416104 CLEC4GQ6UXB4 293 aa15.18■□□□□ 0.02
LINC00222-202ENST00000416104 ZNF526Q8TF50 670 aaPredicted RBP15.18■□□□□ 0.02
LINC00222-202ENST00000416104 PDZRN3Q9UPQ7 1066 aa15.18■□□□□ 0.02
LINC00222-202ENST00000416104 ZNF652Q9Y2D9 606 aa15.18■□□□□ 0.02
LINC00222-202ENST00000416104 CARMIL3Q8ND23 1372 aa15.17■□□□□ 0.02
LINC00222-202ENST00000416104 PDE6BP35913 854 aa15.17■□□□□ 0.02
LINC00222-202ENST00000416104 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
LINC00222-202ENST00000416104 C2CD5Q86YS7 1000 aa15.17■□□□□ 0.02
LINC00222-202ENST00000416104 THUMPD2Q9BTF0 503 aaKnown RBP15.17■□□□□ 0.02
LINC00222-202ENST00000416104 EIF4A1P60842 406 aaKnown RBP15.16■□□□□ 0.02
LINC00222-202ENST00000416104 TTLL6Q8N841 843 aa15.16■□□□□ 0.02
LINC00222-202ENST00000416104 BRIP1Q9BX63 1249 aa15.16■□□□□ 0.02
LINC00222-202ENST00000416104 NBPF26B4DH59 902 aa15.16■□□□□ 0.02
LINC00222-202ENST00000416104 NBPF10Q6P3W6 841 aaKnown RBP15.16■□□□□ 0.02
LINC00222-202ENST00000416104 NBPF15Q8N660 670 aa15.16■□□□□ 0.02
LINC00222-202ENST00000416104 RGL2O15211 777 aa15.15■□□□□ 0.02
LINC00222-202ENST00000416104 TMPOP42166 694 aaKnown RBP15.15■□□□□ 0.02
LINC00222-202ENST00000416104 ST5P78524 1137 aa15.15■□□□□ 0.02
LINC00222-202ENST00000416104 PRR5LQ6MZQ0 368 aa15.15■□□□□ 0.02
LINC00222-202ENST00000416104 CNBD1Q8NA66 436 aa15.15■□□□□ 0.02
LINC00222-202ENST00000416104 C9orf131Q5VYM1 1079 aa15.14■□□□□ 0.01
LINC00222-202ENST00000416104 PRKRIP1Q9H875 184 aaPredicted RBP15.14■□□□□ 0.01
LINC00222-202ENST00000416104 BABAM1Q9NWV8 329 aa15.14■□□□□ 0.01
LINC00222-202ENST00000416104 TSPYL4Q9UJ04 414 aa15.14■□□□□ 0.01
LINC00222-202ENST00000416104 ZNF622Q969S3 477 aaKnown RBP eCLIP15.13■□□□□ 0.01
LINC00222-202ENST00000416104 RUNDC1Q96C34 613 aa15.13■□□□□ 0.01
LINC00222-202ENST00000416104 NRXN2Q9P2S2 1712 aa15.13■□□□□ 0.01
LINC00222-202ENST00000416104 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
LINC00222-202ENST00000416104 NBPF5PQ86XG9 351 aaPredicted RBP15.13■□□□□ 0.01
LINC00222-202ENST00000416104 RRP7AQ9Y3A4 280 aaKnown RBP15.13■□□□□ 0.01
LINC00222-202ENST00000416104 SENP3-EIF4A1A0A087X0R7 540 aa15.12■□□□□ 0.01
LINC00222-202ENST00000416104 TPTE2Q6XPS3 522 aa15.12■□□□□ 0.01
LINC00222-202ENST00000416104 CCDC146Q8IYE0 955 aa15.12■□□□□ 0.01
LINC00222-202ENST00000416104 CCDC24Q8N4L8 307 aa15.12■□□□□ 0.01
LINC00222-202ENST00000416104 NGEFQ8N5V2 710 aa15.12■□□□□ 0.01
LINC00222-202ENST00000416104 RNF181Q9P0P0 153 aa15.11■□□□□ 0.01
LINC00222-202ENST00000416104 ADAMTS8Q9UP79 889 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms