RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 RCAN3Q9UKA8 241 aa11.95□□□□□ -0.5
CHRNA1-206ENST00000416004 MRC1P22897 1456 aa11.95□□□□□ -0.5
CHRNA1-206ENST00000416004 RFC4P35249 363 aa11.95□□□□□ -0.5
CHRNA1-206ENST00000416004 ITPK1Q13572 414 aa11.95□□□□□ -0.5
CHRNA1-206ENST00000416004 MSL1Q68DK7 614 aa11.95□□□□□ -0.5
CHRNA1-206ENST00000416004 NPM2Q86SE8 214 aaKnown RBP11.95□□□□□ -0.5
CHRNA1-206ENST00000416004 SGIP1Q9BQI5 828 aa11.95□□□□□ -0.5
CHRNA1-206ENST00000416004 IL16Q14005 1332 aa11.94□□□□□ -0.5
CHRNA1-206ENST00000416004 RNF123Q5XPI4 1314 aa11.94□□□□□ -0.5
CHRNA1-206ENST00000416004 TSR2Q969E8 191 aaKnown RBP11.94□□□□□ -0.5
CHRNA1-206ENST00000416004 ADAMTS7Q9UKP4 1686 aa11.94□□□□□ -0.5
CHRNA1-206ENST00000416004 FANCIQ9NVI1 1328 aa11.94□□□□□ -0.5
CHRNA1-206ENST00000416004 IRX6P78412 446 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-206ENST00000416004 MCM10Q7L590 875 aa11.93□□□□□ -0.5
CHRNA1-206ENST00000416004 RPS6KA4O75676 772 aa11.93□□□□□ -0.5
CHRNA1-206ENST00000416004 FKBP8Q14318 412 aa11.93□□□□□ -0.5
CHRNA1-206ENST00000416004 VSIG10Q8N0Z9 540 aa11.93□□□□□ -0.5
CHRNA1-206ENST00000416004 NLGN1Q8N2Q7 840 aa11.93□□□□□ -0.5
CHRNA1-206ENST00000416004 TEX13AQ9BXU3 409 aaPredicted RBP11.93□□□□□ -0.5
CHRNA1-206ENST00000416004 MYH16Q9H6N6 1097 aa11.93□□□□□ -0.5
CHRNA1-206ENST00000416004 CICQ96RK0 1608 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-206ENST00000416004 DLG5Q8TDM6 1919 aa11.92□□□□□ -0.5
CHRNA1-206ENST00000416004 HTATSF1O43719 755 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-206ENST00000416004 STARD3NLO95772 234 aa11.92□□□□□ -0.5
CHRNA1-206ENST00000416004 PRKCSHP14314 528 aaPredicted RBP11.92□□□□□ -0.5
CHRNA1-206ENST00000416004 CRKLP46109 303 aaKnown RBP11.92□□□□□ -0.5
CHRNA1-206ENST00000416004 LMOD3Q0VAK6 560 aa11.92□□□□□ -0.5
CHRNA1-206ENST00000416004 GPR162Q16538 588 aa11.92□□□□□ -0.5
CHRNA1-206ENST00000416004 BTBD11A6QL63 1104 aa11.91□□□□□ -0.5
CHRNA1-206ENST00000416004 SLC39A6Q13433 755 aa11.91□□□□□ -0.5
CHRNA1-206ENST00000416004 TJP1Q07157 1748 aa11.91□□□□□ -0.5
CHRNA1-206ENST00000416004 ZPR1O75312 459 aa11.91□□□□□ -0.5
CHRNA1-206ENST00000416004 ZNF853P0CG23 659 aa11.91□□□□□ -0.5
CHRNA1-206ENST00000416004 FMNL2Q96PY5 1086 aa11.91□□□□□ -0.5
CHRNA1-206ENST00000416004 CCDC87Q9NVE4 849 aa11.91□□□□□ -0.5
CHRNA1-206ENST00000416004 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
CHRNA1-206ENST00000416004 ZNF790Q6PG37 636 aa11.9□□□□□ -0.5
CHRNA1-206ENST00000416004 CD2APQ9Y5K6 639 aa11.9□□□□□ -0.5
CHRNA1-206ENST00000416004 SIPA1L3O60292 1781 aaPredicted RBP11.9□□□□□ -0.5
CHRNA1-206ENST00000416004 UBR2Q8IWV8 1755 aa11.9□□□□□ -0.5
CHRNA1-206ENST00000416004 NEFLP07196 543 aa11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 RRP1P56182 461 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 EXOSC9Q06265 439 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 DNAJC10Q8IXB1 793 aa11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 IL17REQ8NFR9 667 aa11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 IFT57Q9NWB7 429 aa11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 PARP3Q9Y6F1 533 aa11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 MYH14Q7Z406 1995 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 CALD1Q05682 793 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
CHRNA1-206ENST00000416004 C4AP0C0L4 1744 aa11.88□□□□□ -0.51
CHRNA1-206ENST00000416004 CHD4Q14839 1912 aa11.88□□□□□ -0.51
CHRNA1-206ENST00000416004 A0A087WZG4 1122 aa11.88□□□□□ -0.51
CHRNA1-206ENST00000416004 YY1P25490 414 aa11.88□□□□□ -0.51
CHRNA1-206ENST00000416004 CFAP44Q96MT7 982 aa11.88□□□□□ -0.51
CHRNA1-206ENST00000416004 CEMIPQ8WUJ3 1361 aa11.88□□□□□ -0.51
CHRNA1-206ENST00000416004 KCPQ6ZWJ8 1503 aa11.88□□□□□ -0.51
CHRNA1-206ENST00000416004 PLIN1O60240 522 aa11.87□□□□□ -0.51
CHRNA1-206ENST00000416004 BCAR3O75815 825 aa11.87□□□□□ -0.51
CHRNA1-206ENST00000416004 MMP10P09238 476 aa11.87□□□□□ -0.51
CHRNA1-206ENST00000416004 GNAI1P63096 354 aa11.87□□□□□ -0.51
CHRNA1-206ENST00000416004 HEG1Q9ULI3 1381 aa11.87□□□□□ -0.51
CHRNA1-206ENST00000416004 GRIN3BO60391 1043 aa11.87□□□□□ -0.51
CHRNA1-206ENST00000416004 CYP19A1P11511 503 aaPredicted RBP11.87□□□□□ -0.51
CHRNA1-206ENST00000416004 SMIM5Q71RC9 77 aa11.87□□□□□ -0.51
CHRNA1-206ENST00000416004 CHL1O00533 1208 aa11.86□□□□□ -0.51
CHRNA1-206ENST00000416004 CANXP27824 592 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-206ENST00000416004 TAF7Q15545 349 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-206ENST00000416004 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
CHRNA1-206ENST00000416004 MIS18AQ9NYP9 233 aa11.86□□□□□ -0.51
CHRNA1-206ENST00000416004 ZNF330Q9Y3S2 320 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-206ENST00000416004 COL15A1P39059 1388 aa11.85□□□□□ -0.51
CHRNA1-206ENST00000416004 RARSP54136 660 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-206ENST00000416004 ZNF496Q96IT1 587 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-206ENST00000416004 USP42Q9H9J4 1324 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-206ENST00000416004 GYS1P13807 737 aa11.85□□□□□ -0.51
CHRNA1-206ENST00000416004 KRT24Q2M2I5 525 aa11.85□□□□□ -0.51
CHRNA1-206ENST00000416004 INTS5Q6P9B9 1019 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-206ENST00000416004 TSPYL6Q8N831 410 aa11.85□□□□□ -0.51
CHRNA1-206ENST00000416004 BCL2L13Q9BXK5 485 aa11.85□□□□□ -0.51
CHRNA1-206ENST00000416004 SOS1Q07889 1333 aaPredicted RBP11.84□□□□□ -0.51
CHRNA1-206ENST00000416004 SNRPA1P09661 255 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-206ENST00000416004 C20orf194Q5TEA3 1177 aa11.84□□□□□ -0.51
CHRNA1-206ENST00000416004 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
CHRNA1-206ENST00000416004 NLGN2Q8NFZ4 835 aa11.84□□□□□ -0.51
CHRNA1-206ENST00000416004 ZBTB1Q9Y2K1 713 aa11.84□□□□□ -0.51
CHRNA1-206ENST00000416004 NARFQ9UHQ1 456 aa11.83□□□□□ -0.52
CHRNA1-206ENST00000416004 ELL2O00472 640 aaPredicted RBP11.83□□□□□ -0.52
CHRNA1-206ENST00000416004 NPHP1O15259 732 aa11.83□□□□□ -0.52
CHRNA1-206ENST00000416004 TGFB2P61812 414 aa11.83□□□□□ -0.52
CHRNA1-206ENST00000416004 USPL1Q5W0Q7 1092 aa11.83□□□□□ -0.52
CHRNA1-206ENST00000416004 VAMP4O75379 141 aa11.82□□□□□ -0.52
CHRNA1-206ENST00000416004 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
CHRNA1-206ENST00000416004 IL6STP40189 918 aaPredicted RBP11.82□□□□□ -0.52
CHRNA1-206ENST00000416004 SSH1Q8WYL5 1049 aa11.82□□□□□ -0.52
CHRNA1-206ENST00000416004 SRP68Q9UHB9 627 aaKnown RBP11.82□□□□□ -0.52
CHRNA1-206ENST00000416004 TSPYL4Q9UJ04 414 aa11.82□□□□□ -0.52
CHRNA1-206ENST00000416004 KIF13BQ9NQT8 1826 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms