RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 USP16Q9Y5T5 823 aa15.92■□□□□ 0.14
PRAMEF9-201ENST00000415919 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
PRAMEF9-201ENST00000415919 CHMP4BQ9H444 224 aaKnown RBP15.91■□□□□ 0.14
PRAMEF9-201ENST00000415919 ATG3Q9NT62 314 aa15.91■□□□□ 0.14
PRAMEF9-201ENST00000415919 BCL9O00512 1426 aa15.91■□□□□ 0.14
PRAMEF9-201ENST00000415919 RBM42Q9BTD8 480 aaKnown RBP15.91■□□□□ 0.14
PRAMEF9-201ENST00000415919 HYPKQ9NX55 129 aa15.91■□□□□ 0.14
PRAMEF9-201ENST00000415919 GLI3P10071 1580 aa15.9■□□□□ 0.14
PRAMEF9-201ENST00000415919 F6X3S4 739 aa15.9■□□□□ 0.14
PRAMEF9-201ENST00000415919 FBXO41Q8TF61 875 aa15.9■□□□□ 0.14
PRAMEF9-201ENST00000415919 DDX21Q9NR30 783 aaKnown RBP eCLIP15.9■□□□□ 0.14
PRAMEF9-201ENST00000415919 ITGB4P16144 1822 aa15.9■□□□□ 0.14
PRAMEF9-201ENST00000415919 PAPPAQ13219 1627 aa15.89■□□□□ 0.13
PRAMEF9-201ENST00000415919 RGS12O14924 1447 aa15.89■□□□□ 0.13
PRAMEF9-201ENST00000415919 MYL6BP14649 208 aa15.89■□□□□ 0.13
PRAMEF9-201ENST00000415919 PROSER3Q2NL68 480 aa15.89■□□□□ 0.13
PRAMEF9-201ENST00000415919 INTS3Q68E01 1043 aaKnown RBP15.89■□□□□ 0.13
PRAMEF9-201ENST00000415919 C5P01031 1676 aa15.89■□□□□ 0.13
PRAMEF9-201ENST00000415919 KCPQ6ZWJ8 1503 aa15.89■□□□□ 0.13
PRAMEF9-201ENST00000415919 DOT1LQ8TEK3 1739 aa15.89■□□□□ 0.13
PRAMEF9-201ENST00000415919 CACNA1FO60840 1977 aa15.88■□□□□ 0.13
PRAMEF9-201ENST00000415919 KAT6BQ8WYB5 2073 aa15.88■□□□□ 0.13
PRAMEF9-201ENST00000415919 CCT4P50991 539 aaKnown RBP15.88■□□□□ 0.13
PRAMEF9-201ENST00000415919 SEPT12Q8IYM1 358 aa15.88■□□□□ 0.13
PRAMEF9-201ENST00000415919 THSD7AQ9UPZ6 1657 aa15.88■□□□□ 0.13
PRAMEF9-201ENST00000415919 UBR2Q8IWV8 1755 aa15.87■□□□□ 0.13
PRAMEF9-201ENST00000415919 ZBTB7BO15156 539 aaPredicted RBP15.87■□□□□ 0.13
PRAMEF9-201ENST00000415919 ONECUT3O60422 494 aaPredicted RBP15.87■□□□□ 0.13
PRAMEF9-201ENST00000415919 PDIA6Q15084 440 aa15.87■□□□□ 0.13
PRAMEF9-201ENST00000415919 ZNF772Q68DY9 489 aaPredicted RBP15.87■□□□□ 0.13
PRAMEF9-201ENST00000415919 AIMP1Q12904 312 aaKnown RBP15.86■□□□□ 0.13
PRAMEF9-201ENST00000415919 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
PRAMEF9-201ENST00000415919 TEX13AQ9BXU3 409 aaPredicted RBP15.86■□□□□ 0.13
PRAMEF9-201ENST00000415919 ZBTB40Q9NUA8 1239 aa15.86■□□□□ 0.13
PRAMEF9-201ENST00000415919 DDX58O95786 925 aaKnown RBP15.86■□□□□ 0.13
PRAMEF9-201ENST00000415919 PIP4K2AP48426 406 aaPredicted RBP15.86■□□□□ 0.13
PRAMEF9-201ENST00000415919 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
PRAMEF9-201ENST00000415919 KCNQ2O43526 872 aa15.85■□□□□ 0.13
PRAMEF9-201ENST00000415919 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
PRAMEF9-201ENST00000415919 PCDHB15Q9Y5E8 787 aa15.85■□□□□ 0.13
PRAMEF9-201ENST00000415919 FAM182BQ5T319 152 aa15.84■□□□□ 0.13
PRAMEF9-201ENST00000415919 DNAJC10Q8IXB1 793 aa15.84■□□□□ 0.13
PRAMEF9-201ENST00000415919 ERBB4Q15303 1308 aa15.84■□□□□ 0.13
PRAMEF9-201ENST00000415919 A1BGP04217 495 aa15.84■□□□□ 0.13
PRAMEF9-201ENST00000415919 KSR2Q6VAB6 950 aa15.84■□□□□ 0.13
PRAMEF9-201ENST00000415919 CENPQQ7L2Z9 268 aaPredicted RBP15.84■□□□□ 0.13
PRAMEF9-201ENST00000415919 XAGE3Q8WTP9 111 aa15.84■□□□□ 0.13
PRAMEF9-201ENST00000415919 DNAAF4Q8WXU2 420 aa15.84■□□□□ 0.13
PRAMEF9-201ENST00000415919 LAMB4A4D0S4 1761 aa15.84■□□□□ 0.13
PRAMEF9-201ENST00000415919 STARD3NLO95772 234 aa15.83■□□□□ 0.12
PRAMEF9-201ENST00000415919 COPS6Q7L5N1 327 aa15.83■□□□□ 0.12
PRAMEF9-201ENST00000415919 SMARCC1Q92922 1105 aaPredicted RBP15.83■□□□□ 0.12
PRAMEF9-201ENST00000415919 MAP3K2Q9Y2U5 619 aa15.83■□□□□ 0.12
PRAMEF9-201ENST00000415919 RIC3Q7Z5B4 369 aa15.82■□□□□ 0.12
PRAMEF9-201ENST00000415919 RWDD1Q9H446 243 aaPredicted RBP15.82■□□□□ 0.12
PRAMEF9-201ENST00000415919 IGHDP01880 384 aa15.82■□□□□ 0.12
PRAMEF9-201ENST00000415919 RBM6P78332 1123 aaKnown RBP15.82■□□□□ 0.12
PRAMEF9-201ENST00000415919 SRCIN1Q9C0H9 1055 aa15.82■□□□□ 0.12
PRAMEF9-201ENST00000415919 C1orf115Q9H7X2 142 aa15.82■□□□□ 0.12
PRAMEF9-201ENST00000415919 ADCY9O60503 1353 aa15.81■□□□□ 0.12
PRAMEF9-201ENST00000415919 PXDNLA1KZ92 1463 aa15.81■□□□□ 0.12
PRAMEF9-201ENST00000415919 NBPF26B4DH59 902 aa15.81■□□□□ 0.12
PRAMEF9-201ENST00000415919 NBPF14Q5TI25 921 aa15.81■□□□□ 0.12
PRAMEF9-201ENST00000415919 NBPF10Q6P3W6 841 aaKnown RBP15.81■□□□□ 0.12
PRAMEF9-201ENST00000415919 NBPF15Q8N660 670 aa15.81■□□□□ 0.12
PRAMEF9-201ENST00000415919 SLC4A9Q96Q91 983 aa15.81■□□□□ 0.12
PRAMEF9-201ENST00000415919 KDM2BQ8NHM5 1336 aa15.81■□□□□ 0.12
PRAMEF9-201ENST00000415919 MEIS3Q99687 375 aa15.8■□□□□ 0.12
PRAMEF9-201ENST00000415919 PALLDQ8WX93 1383 aa15.8■□□□□ 0.12
PRAMEF9-201ENST00000415919 ATP6V1AP38606 617 aa15.8■□□□□ 0.12
PRAMEF9-201ENST00000415919 ANKRD13DQ6ZTN6 518 aa15.8■□□□□ 0.12
PRAMEF9-201ENST00000415919 LRP10Q7Z4F1 713 aa15.8■□□□□ 0.12
PRAMEF9-201ENST00000415919 LOC102724428A0A0B4J2F2 783 aa15.79■□□□□ 0.12
PRAMEF9-201ENST00000415919 SIK1P57059 783 aa15.79■□□□□ 0.12
PRAMEF9-201ENST00000415919 BEND3Q5T5X7 828 aa15.79■□□□□ 0.12
PRAMEF9-201ENST00000415919 KRT27Q7Z3Y8 459 aa15.79■□□□□ 0.12
PRAMEF9-201ENST00000415919 ZNF330Q9Y3S2 320 aaPredicted RBP15.79■□□□□ 0.12
PRAMEF9-201ENST00000415919 GNAI3P08754 354 aa15.78■□□□□ 0.12
PRAMEF9-201ENST00000415919 CYP19A1P11511 503 aaPredicted RBP15.78■□□□□ 0.12
PRAMEF9-201ENST00000415919 NEXNQ0ZGT2 675 aa15.78■□□□□ 0.12
PRAMEF9-201ENST00000415919 ATP10DQ9P241 1426 aa15.77■□□□□ 0.12
PRAMEF9-201ENST00000415919 HDAC1Q13547 482 aaPredicted RBP15.77■□□□□ 0.11
PRAMEF9-201ENST00000415919 PTF1AQ7RTS3 328 aa15.77■□□□□ 0.11
PRAMEF9-201ENST00000415919 ALDH1L1O75891 902 aa15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 GNAI2P04899 355 aa15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 RXRBP28702 533 aa15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 PLBD2Q8NHP8 589 aa15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 MYD88Q99836 296 aa15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 UBTFL1P0CB47 393 aaPredicted RBP15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 FAM196AQ6ZSG2 479 aa15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 TTLL7Q6ZT98 887 aa15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 NPM2Q86SE8 214 aaKnown RBP15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 LINS1Q8NG48 757 aa15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 ARXQ96QS3 562 aa15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 METTL22Q9BUU2 404 aaPredicted RBP15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 USP44Q9H0E7 712 aa15.76■□□□□ 0.11
PRAMEF9-201ENST00000415919 CWF19L2Q2TBE0 894 aaKnown RBP15.75■□□□□ 0.11
PRAMEF9-201ENST00000415919 KIF6Q6ZMV9 814 aa15.74■□□□□ 0.11
PRAMEF9-201ENST00000415919 RPAP2Q8IXW5 612 aaPredicted RBP15.74■□□□□ 0.11
PRAMEF9-201ENST00000415919 C9orf78Q9NZ63 289 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms