RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 WDR17Q8IZU2 1322 aa12.48□□□□□ -0.41
LINC01888-201ENST00000415138 ANP32CO43423 234 aa12.48□□□□□ -0.41
LINC01888-201ENST00000415138 PSEN2P49810 448 aa12.48□□□□□ -0.41
LINC01888-201ENST00000415138 MTHFSP49914 203 aa12.48□□□□□ -0.41
LINC01888-201ENST00000415138 LARP1Q6PKG0 1096 aaKnown RBP12.48□□□□□ -0.41
LINC01888-201ENST00000415138 COL5A2P05997 1499 aaPredicted RBP12.47□□□□□ -0.41
LINC01888-201ENST00000415138 INSRP06213 1382 aa12.47□□□□□ -0.41
LINC01888-201ENST00000415138 HSP90AB2PQ58FF8 381 aa12.47□□□□□ -0.41
LINC01888-201ENST00000415138 ADGRD1Q6QNK2 874 aa12.47□□□□□ -0.41
LINC01888-201ENST00000415138 RGS17Q9UGC6 210 aaPredicted RBP12.47□□□□□ -0.41
LINC01888-201ENST00000415138 ATRNO75882 1429 aa12.46□□□□□ -0.41
LINC01888-201ENST00000415138 CRB1P82279 1406 aa12.46□□□□□ -0.41
LINC01888-201ENST00000415138 RGPD2P0DJD1 1756 aa12.46□□□□□ -0.41
LINC01888-201ENST00000415138 PEAK1Q9H792 1746 aa12.46□□□□□ -0.41
LINC01888-201ENST00000415138 POTEAQ6S8J7 498 aa12.46□□□□□ -0.41
LINC01888-201ENST00000415138 KCNK17Q96T54 332 aa12.46□□□□□ -0.41
LINC01888-201ENST00000415138 THRAP3Q9Y2W1 955 aaKnown RBP12.46□□□□□ -0.41
LINC01888-201ENST00000415138 NOP58Q9Y2X3 529 aaKnown RBP12.46□□□□□ -0.41
LINC01888-201ENST00000415138 SPATA31A5Q5VU36 1347 aa12.45□□□□□ -0.42
LINC01888-201ENST00000415138 SPATA31A7Q8IWB4 1347 aa12.45□□□□□ -0.42
LINC01888-201ENST00000415138 PPP2R1AP30153 589 aa12.45□□□□□ -0.42
LINC01888-201ENST00000415138 DMRTA1Q5VZB9 504 aa12.45□□□□□ -0.42
LINC01888-201ENST00000415138 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
LINC01888-201ENST00000415138 CARD10Q9BWT7 1032 aa12.45□□□□□ -0.42
LINC01888-201ENST00000415138 SPATA31A1Q5TZJ5 1347 aa12.44□□□□□ -0.42
LINC01888-201ENST00000415138 TK2O00142 265 aa12.44□□□□□ -0.42
LINC01888-201ENST00000415138 DIAPH1O60610 1272 aaKnown RBP12.44□□□□□ -0.42
LINC01888-201ENST00000415138 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
LINC01888-201ENST00000415138 CDCA7Q9BWT1 371 aaPredicted RBP12.44□□□□□ -0.42
LINC01888-201ENST00000415138 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
LINC01888-201ENST00000415138 NUDCQ9Y266 331 aa12.44□□□□□ -0.42
LINC01888-201ENST00000415138 CDK12Q9NYV4 1490 aaPredicted RBP12.43□□□□□ -0.42
LINC01888-201ENST00000415138 FOSBP53539 338 aa12.43□□□□□ -0.42
LINC01888-201ENST00000415138 NAP1L5Q96NT1 182 aaPredicted RBP12.43□□□□□ -0.42
LINC01888-201ENST00000415138 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
LINC01888-201ENST00000415138 MYBBP1AQ9BQG0 1328 aaKnown RBP12.42□□□□□ -0.42
LINC01888-201ENST00000415138 FAM43AQ8N2R8 423 aa12.42□□□□□ -0.42
LINC01888-201ENST00000415138 CFAP44Q96MT7 982 aa12.42□□□□□ -0.42
LINC01888-201ENST00000415138 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
LINC01888-201ENST00000415138 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
LINC01888-201ENST00000415138 GLI3P10071 1580 aa12.41□□□□□ -0.42
LINC01888-201ENST00000415138 PDE3BQ13370 1112 aa12.41□□□□□ -0.42
LINC01888-201ENST00000415138 EIF4A2Q14240 407 aaKnown RBP12.41□□□□□ -0.42
LINC01888-201ENST00000415138 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
LINC01888-201ENST00000415138 SEPT12Q8IYM1 358 aa12.41□□□□□ -0.42
LINC01888-201ENST00000415138 RAPGEF4Q8WZA2 1011 aa12.41□□□□□ -0.42
LINC01888-201ENST00000415138 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
LINC01888-201ENST00000415138 WNK3Q9BYP7 1800 aa12.41□□□□□ -0.42
LINC01888-201ENST00000415138 EXOC5O00471 708 aa12.4□□□□□ -0.42
LINC01888-201ENST00000415138 IL2RBP14784 551 aa12.4□□□□□ -0.42
LINC01888-201ENST00000415138 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
LINC01888-201ENST00000415138 NBPF6Q5VWK0 638 aa12.4□□□□□ -0.42
LINC01888-201ENST00000415138 PAXIP1Q6ZW49 1069 aaPredicted RBP12.4□□□□□ -0.42
LINC01888-201ENST00000415138 NBPF4Q96M43 638 aa12.4□□□□□ -0.42
LINC01888-201ENST00000415138 BRWD3Q6RI45 1802 aa12.39□□□□□ -0.43
LINC01888-201ENST00000415138 NEFMP07197 916 aa12.39□□□□□ -0.43
LINC01888-201ENST00000415138 DDB1Q16531 1140 aa12.39□□□□□ -0.43
LINC01888-201ENST00000415138 USHBP1Q8N6Y0 703 aa12.39□□□□□ -0.43
LINC01888-201ENST00000415138 PARP4Q9UKK3 1724 aaKnown RBP12.39□□□□□ -0.43
LINC01888-201ENST00000415138 KAT6BQ8WYB5 2073 aa12.39□□□□□ -0.43
LINC01888-201ENST00000415138 ONECUT3O60422 494 aaPredicted RBP12.38□□□□□ -0.43
LINC01888-201ENST00000415138 PTPREP23469 700 aa12.38□□□□□ -0.43
LINC01888-201ENST00000415138 ZDHHC16Q969W1 377 aa12.38□□□□□ -0.43
LINC01888-201ENST00000415138 EYA1Q99502 592 aa12.38□□□□□ -0.43
LINC01888-201ENST00000415138 IL13P35225 146 aa12.37□□□□□ -0.43
LINC01888-201ENST00000415138 CALD1Q05682 793 aaKnown RBP12.37□□□□□ -0.43
LINC01888-201ENST00000415138 KRT27Q7Z3Y8 459 aa12.37□□□□□ -0.43
LINC01888-201ENST00000415138 PNNQ9H307 717 aaKnown RBP12.37□□□□□ -0.43
LINC01888-201ENST00000415138 BCCIPQ9P287 314 aaKnown RBP eCLIP12.37□□□□□ -0.43
LINC01888-201ENST00000415138 U2AF1L5P0DN76 240 aaPredicted RBP12.36□□□□□ -0.43
LINC01888-201ENST00000415138 U2AF1Q01081 240 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC01888-201ENST00000415138 CAMK2BQ13554 666 aa12.36□□□□□ -0.43
LINC01888-201ENST00000415138 WDR43Q15061 677 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC01888-201ENST00000415138 SULT6B1Q6IMI4 303 aa12.36□□□□□ -0.43
LINC01888-201ENST00000415138 IPO4Q8TEX9 1081 aaKnown RBP12.36□□□□□ -0.43
LINC01888-201ENST00000415138 HRO43593 1189 aa12.35□□□□□ -0.43
LINC01888-201ENST00000415138 CHMP4AQ9BY43 222 aa12.35□□□□□ -0.43
LINC01888-201ENST00000415138 SPG7Q9UQ90 795 aa12.35□□□□□ -0.43
LINC01888-201ENST00000415138 HMOX1P09601 288 aa12.34□□□□□ -0.43
LINC01888-201ENST00000415138 HSP90B1P14625 803 aaKnown RBP12.34□□□□□ -0.43
LINC01888-201ENST00000415138 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
LINC01888-201ENST00000415138 PLEKHO1Q53GL0 409 aaPredicted RBP12.34□□□□□ -0.43
LINC01888-201ENST00000415138 ZCRB1Q8TBF4 217 aaKnown RBP12.34□□□□□ -0.43
LINC01888-201ENST00000415138 DDX54Q8TDD1 881 aaKnown RBP12.34□□□□□ -0.43
LINC01888-201ENST00000415138 THSD7AQ9UPZ6 1657 aa12.34□□□□□ -0.43
LINC01888-201ENST00000415138 RGS12O14924 1447 aa12.34□□□□□ -0.43
LINC01888-201ENST00000415138 IGSF1Q8N6C5 1336 aa12.34□□□□□ -0.43
LINC01888-201ENST00000415138 HSP90AA2PQ14568 343 aaPredicted RBP12.33□□□□□ -0.44
LINC01888-201ENST00000415138 AMOTQ4VCS5 1084 aa12.33□□□□□ -0.44
LINC01888-201ENST00000415138 ADAM33Q9BZ11 813 aa12.33□□□□□ -0.44
LINC01888-201ENST00000415138 VPS9D1Q9Y2B5 631 aa12.33□□□□□ -0.44
LINC01888-201ENST00000415138 RGPD1P0DJD0 1748 aa12.33□□□□□ -0.44
LINC01888-201ENST00000415138 DPYSL4O14531 572 aa12.32□□□□□ -0.44
LINC01888-201ENST00000415138 FAM196AQ6ZSG2 479 aa12.32□□□□□ -0.44
LINC01888-201ENST00000415138 MRS2Q9HD23 443 aa12.32□□□□□ -0.44
LINC01888-201ENST00000415138 NAP1L2Q9ULW6 460 aaPredicted RBP12.32□□□□□ -0.44
LINC01888-201ENST00000415138 LRRC37A3O60309 1634 aa12.32□□□□□ -0.44
LINC01888-201ENST00000415138 FCHSD2O94868 740 aa12.31□□□□□ -0.44
LINC01888-201ENST00000415138 SF3B2Q13435 895 aaKnown RBP12.31□□□□□ -0.44
LINC01888-201ENST00000415138 C1orf141Q5JVX7 400 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms