RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 UQCRHLA0A096LP55 91 aa21.44■■□□□ 1.02
SHANK3-202ENST00000414786 POLR3GO15318 223 aaPredicted RBP21.44■■□□□ 1.02
SHANK3-202ENST00000414786 MRE11P49959 708 aa21.44■■□□□ 1.02
SHANK3-202ENST00000414786 NUP62CLQ9H1M0 184 aa21.44■■□□□ 1.02
SHANK3-202ENST00000414786 RAB3IL1Q8TBN0 382 aa21.44■■□□□ 1.02
SHANK3-202ENST00000414786 CCDC8Q9H0W5 538 aaPredicted RBP21.44■■□□□ 1.02
SHANK3-202ENST00000414786 AEBP1Q8IUX7 1158 aa21.43■■□□□ 1.02
SHANK3-202ENST00000414786 TRMT1Q9NXH9 659 aaKnown RBP21.43■■□□□ 1.02
SHANK3-202ENST00000414786 ZBTB21Q9ULJ3 1066 aa21.43■■□□□ 1.02
SHANK3-202ENST00000414786 BIN1O00499 593 aa21.43■■□□□ 1.02
SHANK3-202ENST00000414786 ACSBG1Q96GR2 724 aa21.43■■□□□ 1.02
SHANK3-202ENST00000414786 ZNF644Q9H582 1327 aaPredicted RBP21.43■■□□□ 1.02
SHANK3-202ENST00000414786 CNTLNQ9NXG0 1405 aa21.43■■□□□ 1.02
SHANK3-202ENST00000414786 PICALMQ13492 652 aa21.43■■□□□ 1.02
SHANK3-202ENST00000414786 CEP131Q9UPN4 1083 aa21.41■■□□□ 1.02
SHANK3-202ENST00000414786 TIGD1Q96MW7 591 aa21.41■■□□□ 1.02
SHANK3-202ENST00000414786 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
SHANK3-202ENST00000414786 IFIT1P09914 478 aaKnown RBP21.41■■□□□ 1.02
SHANK3-202ENST00000414786 NDC80O14777 642 aa21.41■■□□□ 1.02
SHANK3-202ENST00000414786 IQSEC3Q9UPP2 1182 aaPredicted RBP21.41■■□□□ 1.02
SHANK3-202ENST00000414786 KAT6BQ8WYB5 2073 aa21.4■■□□□ 1.02
SHANK3-202ENST00000414786 MBD3O95983 291 aa21.4■■□□□ 1.02
SHANK3-202ENST00000414786 PRPF40BQ6NWY9 871 aaKnown RBP21.4■■□□□ 1.02
SHANK3-202ENST00000414786 CTNNA3Q9UI47 895 aa21.4■■□□□ 1.02
SHANK3-202ENST00000414786 SLC12A5Q9H2X9 1139 aa21.4■■□□□ 1.02
SHANK3-202ENST00000414786 ZNF287Q9HBT7 754 aa21.4■■□□□ 1.02
SHANK3-202ENST00000414786 BMS1Q14692 1282 aaKnown RBP21.4■■□□□ 1.02
SHANK3-202ENST00000414786 CCDC40Q4G0X9 1142 aa21.4■■□□□ 1.02
SHANK3-202ENST00000414786 MTIF2P46199 727 aaKnown RBP21.4■■□□□ 1.02
SHANK3-202ENST00000414786 TMEM266Q2M3C6 531 aa21.4■■□□□ 1.02
SHANK3-202ENST00000414786 KIF4BQ2VIQ3 1234 aa21.4■■□□□ 1.02
SHANK3-202ENST00000414786 MCM10Q7L590 875 aa21.4■■□□□ 1.02
SHANK3-202ENST00000414786 CTCFLQ8NI51 663 aaPredicted RBP21.39■■□□□ 1.02
SHANK3-202ENST00000414786 IPO4Q8TEX9 1081 aaKnown RBP21.39■■□□□ 1.02
SHANK3-202ENST00000414786 THUMPD2Q9BTF0 503 aaKnown RBP21.39■■□□□ 1.01
SHANK3-202ENST00000414786 SNRKQ9NRH2 765 aa21.39■■□□□ 1.01
SHANK3-202ENST00000414786 PHACTR2O75167 634 aa21.39■■□□□ 1.01
SHANK3-202ENST00000414786 CSPG5O95196 566 aa21.39■■□□□ 1.01
SHANK3-202ENST00000414786 HAND2P61296 217 aa21.39■■□□□ 1.01
SHANK3-202ENST00000414786 WASF1Q92558 559 aa21.39■■□□□ 1.01
SHANK3-202ENST00000414786 ZBTB3Q9H5J0 574 aa21.39■■□□□ 1.01
SHANK3-202ENST00000414786 VEZTQ9HBM0 779 aa21.39■■□□□ 1.01
SHANK3-202ENST00000414786 SLC12A7Q9Y666 1083 aa21.39■■□□□ 1.01
SHANK3-202ENST00000414786 URI1O94763 535 aaPredicted RBP21.39■■□□□ 1.01
SHANK3-202ENST00000414786 HSP90AA4PQ58FG1 418 aa21.39■■□□□ 1.01
SHANK3-202ENST00000414786 ZBED9Q6R2W3 1325 aa21.39■■□□□ 1.01
SHANK3-202ENST00000414786 CCDC63Q8NA47 563 aa21.38■■□□□ 1.01
SHANK3-202ENST00000414786 MXRA7P84157 204 aa21.38■■□□□ 1.01
SHANK3-202ENST00000414786 CCT4P50991 539 aaKnown RBP21.38■■□□□ 1.01
SHANK3-202ENST00000414786 RNF216Q9NWF9 866 aaPredicted RBP21.38■■□□□ 1.01
SHANK3-202ENST00000414786 ZSWIM4Q9H7M6 989 aa21.37■■□□□ 1.01
SHANK3-202ENST00000414786 IFIT3O14879 490 aaKnown RBP21.37■■□□□ 1.01
SHANK3-202ENST00000414786 CFAP58Q5T655 872 aa21.37■■□□□ 1.01
SHANK3-202ENST00000414786 VPS36Q86VN1 386 aa21.37■■□□□ 1.01
SHANK3-202ENST00000414786 WDR33Q9C0J8 1336 aaKnown RBP21.37■■□□□ 1.01
SHANK3-202ENST00000414786 CCDC194A0A1B0GVG4 234 aa21.37■■□□□ 1.01
SHANK3-202ENST00000414786 RFC4P35249 363 aa21.37■■□□□ 1.01
SHANK3-202ENST00000414786 UTP14AQ9BVJ6 771 aaKnown RBP21.37■■□□□ 1.01
SHANK3-202ENST00000414786 MAATS1Q7Z4T9 603 aa21.37■■□□□ 1.01
SHANK3-202ENST00000414786 EHMT1Q9H9B1 1298 aa21.37■■□□□ 1.01
SHANK3-202ENST00000414786 BAG4O95429 457 aaKnown RBP21.36■■□□□ 1.01
SHANK3-202ENST00000414786 GCOM1H8Y6P7 765 aaPredicted RBP21.36■■□□□ 1.01
SHANK3-202ENST00000414786 MYZAPP0CAP1 466 aa21.36■■□□□ 1.01
SHANK3-202ENST00000414786 SYCE3A1L190 88 aa21.36■■□□□ 1.01
SHANK3-202ENST00000414786 CABP5Q9NP86 173 aa21.36■■□□□ 1.01
SHANK3-202ENST00000414786 CCDC160A6NGH7 325 aa21.36■■□□□ 1.01
SHANK3-202ENST00000414786 SMTNL1A8MU46 457 aa21.36■■□□□ 1.01
SHANK3-202ENST00000414786 SSRP1Q08945 709 aaKnown RBP21.36■■□□□ 1.01
SHANK3-202ENST00000414786 BIRC2Q13490 618 aa21.35■■□□□ 1.01
SHANK3-202ENST00000414786 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
SHANK3-202ENST00000414786 ATF7IPQ6VMQ6 1270 aa21.35■■□□□ 1.01
SHANK3-202ENST00000414786 GIGYF2Q6Y7W6 1299 aaKnown RBP21.35■■□□□ 1.01
SHANK3-202ENST00000414786 FSD2A1L4K1 749 aa21.34■■□□□ 1.01
SHANK3-202ENST00000414786 ANKLE2Q86XL3 938 aa21.34■■□□□ 1.01
SHANK3-202ENST00000414786 A0A1W2PRG0 241 aa21.34■■□□□ 1.01
SHANK3-202ENST00000414786 SHTN1A0MZ66 631 aa21.34■■□□□ 1.01
SHANK3-202ENST00000414786 IFIT5Q13325 482 aaKnown RBP21.34■■□□□ 1.01
SHANK3-202ENST00000414786 AFAP1Q8N556 730 aa21.34■■□□□ 1.01
SHANK3-202ENST00000414786 MRVI1Q9Y6F6 885 aa21.34■■□□□ 1.01
SHANK3-202ENST00000414786 IKBKGQ9Y6K9 419 aa21.34■■□□□ 1.01
SHANK3-202ENST00000414786 TSPY2A6NKD2 308 aa21.34■■□□□ 1.01
SHANK3-202ENST00000414786 SLC5A1P13866 664 aa21.34■■□□□ 1.01
SHANK3-202ENST00000414786 GPATCH11Q8N954 259 aa21.34■■□□□ 1.01
SHANK3-202ENST00000414786 JAG2Q9Y219 1238 aa21.33■■□□□ 1.01
SHANK3-202ENST00000414786 IQCA1Q86XH1 822 aa21.33■■□□□ 1.01
SHANK3-202ENST00000414786 FAM170AA1A519 330 aa21.33■■□□□ 1
SHANK3-202ENST00000414786 GOLGA8AA7E2F4 631 aa21.33■■□□□ 1
SHANK3-202ENST00000414786 GOLGA8BA8MQT2 603 aa21.33■■□□□ 1
SHANK3-202ENST00000414786 ANKRD18BA2A2Z9 1011 aa21.33■■□□□ 1
SHANK3-202ENST00000414786 K7ELQ4 463 aaPredicted RBP21.32■■□□□ 1
SHANK3-202ENST00000414786 ZNF213O14771 459 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 ATP5J2-PTCD1G3V325 749 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 CCDC174Q6PII3 467 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 UBXN4Q92575 508 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 TCHPQ9BT92 498 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 MCM2P49736 904 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 KIF5CO60282 957 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 SPATA24Q86W54 205 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 THEMISQ8N1K5 641 aaPredicted RBP21.32■■□□□ 1
SHANK3-202ENST00000414786 IL27Q8NEV9 243 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms