RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 RCAN3Q9UKA8 241 aa19.74■□□□□ 0.75
LINC00116-201ENST00000414416 SLC27A3Q5K4L6 730 aa19.73■□□□□ 0.75
LINC00116-201ENST00000414416 RNF123Q5XPI4 1314 aa19.72■□□□□ 0.75
LINC00116-201ENST00000414416 RARSP54136 660 aaKnown RBP19.72■□□□□ 0.75
LINC00116-201ENST00000414416 RGPD3A6NKT7 1758 aaPredicted RBP19.72■□□□□ 0.75
LINC00116-201ENST00000414416 RGPD4Q7Z3J3 1758 aa19.72■□□□□ 0.75
LINC00116-201ENST00000414416 TCERG1O14776 1098 aaKnown RBP19.72■□□□□ 0.75
LINC00116-201ENST00000414416 TXNRD1Q16881 649 aa19.72■□□□□ 0.75
LINC00116-201ENST00000414416 ALDH1L2Q3SY69 923 aa19.72■□□□□ 0.75
LINC00116-201ENST00000414416 ILDR2Q71H61 639 aa19.72■□□□□ 0.75
LINC00116-201ENST00000414416 STK31Q9BXU1 1019 aa19.72■□□□□ 0.75
LINC00116-201ENST00000414416 CYP19A1P11511 503 aaPredicted RBP19.71■□□□□ 0.75
LINC00116-201ENST00000414416 BAG6P46379 1132 aa19.71■□□□□ 0.75
LINC00116-201ENST00000414416 SSH1Q8WYL5 1049 aa19.71■□□□□ 0.75
LINC00116-201ENST00000414416 PROM2Q8N271 834 aa19.71■□□□□ 0.75
LINC00116-201ENST00000414416 BCL2L13Q9BXK5 485 aa19.71■□□□□ 0.75
LINC00116-201ENST00000414416 LRRC4BQ9NT99 713 aa19.71■□□□□ 0.75
LINC00116-201ENST00000414416 SMC4Q9NTJ3 1288 aa19.71■□□□□ 0.75
LINC00116-201ENST00000414416 EN1Q05925 392 aaPredicted RBP19.7■□□□□ 0.74
LINC00116-201ENST00000414416 LINC00116Q8NCU8 138 aa19.7■□□□□ 0.74
LINC00116-201ENST00000414416 CHPF2Q9P2E5 772 aa19.7■□□□□ 0.74
LINC00116-201ENST00000414416 DBF4Q9UBU7 674 aaPredicted RBP19.7■□□□□ 0.74
LINC00116-201ENST00000414416 COL5A3P25940 1745 aaPredicted RBP19.69■□□□□ 0.74
LINC00116-201ENST00000414416 A1BGP04217 495 aa19.69■□□□□ 0.74
LINC00116-201ENST00000414416 CAMKK2Q96RR4 588 aa19.69■□□□□ 0.74
LINC00116-201ENST00000414416 ERBB4Q15303 1308 aa19.68■□□□□ 0.74
LINC00116-201ENST00000414416 BCAR3O75815 825 aa19.68■□□□□ 0.74
LINC00116-201ENST00000414416 SLC4A2P04920 1241 aa19.68■□□□□ 0.74
LINC00116-201ENST00000414416 HMGB2P26583 209 aaKnown RBP19.68■□□□□ 0.74
LINC00116-201ENST00000414416 CRKLP46109 303 aaKnown RBP19.68■□□□□ 0.74
LINC00116-201ENST00000414416 EZH2Q15910 746 aaKnown RBP19.67■□□□□ 0.74
LINC00116-201ENST00000414416 DEFB132Q7Z7B7 95 aa19.67■□□□□ 0.74
LINC00116-201ENST00000414416 UPF1Q92900 1129 aaKnown RBP eCLIP19.67■□□□□ 0.74
LINC00116-201ENST00000414416 DDX21Q9NR30 783 aaKnown RBP eCLIP19.67■□□□□ 0.74
LINC00116-201ENST00000414416 TAF1LQ8IZX4 1826 aa19.67■□□□□ 0.74
LINC00116-201ENST00000414416 PIP4K2AP48426 406 aaPredicted RBP19.67■□□□□ 0.74
LINC00116-201ENST00000414416 PDIA6Q15084 440 aa19.67■□□□□ 0.74
LINC00116-201ENST00000414416 CCDC87Q9NVE4 849 aa19.67■□□□□ 0.74
LINC00116-201ENST00000414416 MYL6BP14649 208 aa19.66■□□□□ 0.74
LINC00116-201ENST00000414416 PROSER3Q2NL68 480 aa19.66■□□□□ 0.74
LINC00116-201ENST00000414416 MRPL50Q8N5N7 158 aaKnown RBP19.66■□□□□ 0.74
LINC00116-201ENST00000414416 NBPF26B4DH59 902 aa19.66■□□□□ 0.74
LINC00116-201ENST00000414416 ANXA1P04083 346 aa19.66■□□□□ 0.74
LINC00116-201ENST00000414416 NBPF14Q5TI25 921 aa19.66■□□□□ 0.74
LINC00116-201ENST00000414416 NBPF10Q6P3W6 841 aaKnown RBP19.66■□□□□ 0.74
LINC00116-201ENST00000414416 INTS5Q6P9B9 1019 aaKnown RBP19.66■□□□□ 0.74
LINC00116-201ENST00000414416 NBPF15Q8N660 670 aa19.66■□□□□ 0.74
LINC00116-201ENST00000414416 ZBTB1Q9Y2K1 713 aa19.66■□□□□ 0.74
LINC00116-201ENST00000414416 CNTNAP4Q9C0A0 1308 aa19.65■□□□□ 0.74
LINC00116-201ENST00000414416 CANXP27824 592 aaKnown RBP19.65■□□□□ 0.74
LINC00116-201ENST00000414416 ERICH6Q7L0X2 663 aa19.65■□□□□ 0.74
LINC00116-201ENST00000414416 HYPKQ9NX55 129 aa19.65■□□□□ 0.74
LINC00116-201ENST00000414416 BRPF1P55201 1214 aaPredicted RBP19.64■□□□□ 0.74
LINC00116-201ENST00000414416 RC3H1Q5TC82 1133 aaKnown RBP19.64■□□□□ 0.74
LINC00116-201ENST00000414416 CACNA1FO60840 1977 aa19.64■□□□□ 0.74
LINC00116-201ENST00000414416 C4BP0C0L5 1744 aa19.64■□□□□ 0.73
LINC00116-201ENST00000414416 RRP1P56182 461 aaKnown RBP19.63■□□□□ 0.73
LINC00116-201ENST00000414416 MYH14Q7Z406 1995 aaKnown RBP19.63■□□□□ 0.73
LINC00116-201ENST00000414416 RREB1Q92766 1687 aa19.63■□□□□ 0.73
LINC00116-201ENST00000414416 AK7Q96M32 723 aa19.63■□□□□ 0.73
LINC00116-201ENST00000414416 PHAXQ9H814 394 aaKnown RBP19.63■□□□□ 0.73
LINC00116-201ENST00000414416 ZNF330Q9Y3S2 320 aaPredicted RBP19.63■□□□□ 0.73
LINC00116-201ENST00000414416 KIF16BQ96L93 1317 aa19.62■□□□□ 0.73
LINC00116-201ENST00000414416 IL6STP40189 918 aaPredicted RBP19.62■□□□□ 0.73
LINC00116-201ENST00000414416 LRP10Q7Z4F1 713 aa19.62■□□□□ 0.73
LINC00116-201ENST00000414416 FRAT1Q92837 279 aaPredicted RBP19.62■□□□□ 0.73
LINC00116-201ENST00000414416 FLIIQ13045 1269 aa19.61■□□□□ 0.73
LINC00116-201ENST00000414416 G2E3Q7L622 706 aa19.61■□□□□ 0.73
LINC00116-201ENST00000414416 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
LINC00116-201ENST00000414416 NOB1Q9ULX3 412 aaKnown RBP19.61■□□□□ 0.73
LINC00116-201ENST00000414416 GNPATO15228 680 aa19.61■□□□□ 0.73
LINC00116-201ENST00000414416 PLIN1O60240 522 aa19.61■□□□□ 0.73
LINC00116-201ENST00000414416 AIMP1Q12904 312 aaKnown RBP19.6■□□□□ 0.73
LINC00116-201ENST00000414416 RPS6KA4O75676 772 aa19.6■□□□□ 0.73
LINC00116-201ENST00000414416 COPS6Q7L5N1 327 aa19.6■□□□□ 0.73
LINC00116-201ENST00000414416 XAGE3Q8WTP9 111 aa19.6■□□□□ 0.73
LINC00116-201ENST00000414416 IPO8O15397 1037 aaKnown RBP19.59■□□□□ 0.73
LINC00116-201ENST00000414416 EIF5P55010 431 aaKnown RBP19.59■□□□□ 0.73
LINC00116-201ENST00000414416 RTCBQ9Y3I0 505 aaKnown RBP19.59■□□□□ 0.73
LINC00116-201ENST00000414416 PTPRCP08575 1304 aa19.58■□□□□ 0.73
LINC00116-201ENST00000414416 PRKCSHP14314 528 aaPredicted RBP19.58■□□□□ 0.73
LINC00116-201ENST00000414416 FKBP5Q13451 457 aaPredicted RBP19.58■□□□□ 0.73
LINC00116-201ENST00000414416 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.58■□□□□ 0.73
LINC00116-201ENST00000414416 ZKSCAN2Q63HK3 967 aa19.57■□□□□ 0.72
LINC00116-201ENST00000414416 ARHGAP45Q92619 1136 aa19.57■□□□□ 0.72
LINC00116-201ENST00000414416 AKT1S1Q96B36 256 aa19.57■□□□□ 0.72
LINC00116-201ENST00000414416 NUP188Q5SRE5 1749 aa19.57■□□□□ 0.72
LINC00116-201ENST00000414416 COL15A1P39059 1388 aa19.57■□□□□ 0.72
LINC00116-201ENST00000414416 DDX58O95786 925 aaKnown RBP19.56■□□□□ 0.72
LINC00116-201ENST00000414416 ZNF827Q17R98 1081 aa19.56■□□□□ 0.72
LINC00116-201ENST00000414416 ARXQ96QS3 562 aa19.56■□□□□ 0.72
LINC00116-201ENST00000414416 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
LINC00116-201ENST00000414416 ATF7IPQ6VMQ6 1270 aa19.56■□□□□ 0.72
LINC00116-201ENST00000414416 PHF14O94880 888 aa19.55■□□□□ 0.72
LINC00116-201ENST00000414416 KIF6Q6ZMV9 814 aa19.55■□□□□ 0.72
LINC00116-201ENST00000414416 TTLL7Q6ZT98 887 aa19.55■□□□□ 0.72
LINC00116-201ENST00000414416 TFCP2L1Q9NZI6 479 aa19.55■□□□□ 0.72
LINC00116-201ENST00000414416 UBR3Q6ZT12 1888 aa19.55■□□□□ 0.72
LINC00116-201ENST00000414416 A0A087WZG4 1122 aa19.55■□□□□ 0.72
LINC00116-201ENST00000414416 TRIM27P14373 513 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms