RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 SOS1Q07889 1333 aaPredicted RBP22.33■■□□□ 1.16
SCAMP4-204ENST00000414057 KCPQ6ZWJ8 1503 aa22.32■■□□□ 1.16
SCAMP4-204ENST00000414057 SRP68Q9UHB9 627 aaKnown RBP22.32■■□□□ 1.16
SCAMP4-204ENST00000414057 FAM9BQ8IZU0 186 aa22.31■■□□□ 1.16
SCAMP4-204ENST00000414057 CEMIPQ8WUJ3 1361 aa22.31■■□□□ 1.16
SCAMP4-204ENST00000414057 C10orf71Q711Q0 1435 aa22.31■■□□□ 1.16
SCAMP4-204ENST00000414057 FKBP8Q14318 412 aa22.3■■□□□ 1.16
SCAMP4-204ENST00000414057 FMNL2Q96PY5 1086 aa22.29■■□□□ 1.16
SCAMP4-204ENST00000414057 NARFQ9UHQ1 456 aa22.29■■□□□ 1.16
SCAMP4-204ENST00000414057 ZBTB1Q9Y2K1 713 aa22.29■■□□□ 1.16
SCAMP4-204ENST00000414057 C4AP0C0L4 1744 aa22.29■■□□□ 1.16
SCAMP4-204ENST00000414057 A0A087WZG4 1122 aa22.28■■□□□ 1.16
SCAMP4-204ENST00000414057 BTBD11A6QL63 1104 aa22.28■■□□□ 1.16
SCAMP4-204ENST00000414057 USPL1Q5W0Q7 1092 aa22.28■■□□□ 1.16
SCAMP4-204ENST00000414057 ZNF496Q96IT1 587 aaPredicted RBP22.28■■□□□ 1.16
SCAMP4-204ENST00000414057 WWC3Q9ULE0 1092 aa22.28■■□□□ 1.16
SCAMP4-204ENST00000414057 COL15A1P39059 1388 aa22.28■■□□□ 1.16
SCAMP4-204ENST00000414057 HEG1Q9ULI3 1381 aa22.28■■□□□ 1.16
SCAMP4-204ENST00000414057 PXDNLA1KZ92 1463 aa22.28■■□□□ 1.16
SCAMP4-204ENST00000414057 VIRMAQ69YN4 1812 aaKnown RBP22.28■■□□□ 1.16
SCAMP4-204ENST00000414057 HTATSF1O43719 755 aaKnown RBP22.28■■□□□ 1.16
SCAMP4-204ENST00000414057 A0A0G2JLW4 131 aa22.27■■□□□ 1.16
SCAMP4-204ENST00000414057 CANXP27824 592 aaKnown RBP22.27■■□□□ 1.16
SCAMP4-204ENST00000414057 NPM2Q86SE8 214 aaKnown RBP22.27■■□□□ 1.16
SCAMP4-204ENST00000414057 TM4SF1P30408 202 aa22.26■■□□□ 1.15
SCAMP4-204ENST00000414057 PNNQ9H307 717 aaKnown RBP22.25■■□□□ 1.15
SCAMP4-204ENST00000414057 BCS1LQ9Y276 419 aa22.25■■□□□ 1.15
SCAMP4-204ENST00000414057 KIF13BQ9NQT8 1826 aa22.25■■□□□ 1.15
SCAMP4-204ENST00000414057 UBR2Q8IWV8 1755 aa22.25■■□□□ 1.15
SCAMP4-204ENST00000414057 GIGYF1O75420 1035 aaPredicted RBP22.24■■□□□ 1.15
SCAMP4-204ENST00000414057 DPEP1P16444 411 aa22.24■■□□□ 1.15
SCAMP4-204ENST00000414057 DDR1Q08345 913 aa22.24■■□□□ 1.15
SCAMP4-204ENST00000414057 POLRMTO00411 1230 aaKnown RBP22.23■■□□□ 1.15
SCAMP4-204ENST00000414057 IL6STP40189 918 aaPredicted RBP22.22■■□□□ 1.15
SCAMP4-204ENST00000414057 EIF5P55010 431 aaKnown RBP22.22■■□□□ 1.15
SCAMP4-204ENST00000414057 PIM2Q9P1W9 311 aa22.22■■□□□ 1.15
SCAMP4-204ENST00000414057 MCM10Q7L590 875 aa22.22■■□□□ 1.15
SCAMP4-204ENST00000414057 C1QTNF8P60827 252 aa22.21■■□□□ 1.15
SCAMP4-204ENST00000414057 HNRNPUQ00839 825 aaKnown RBP eCLIP22.21■■□□□ 1.15
SCAMP4-204ENST00000414057 NFIXQ14938 502 aa22.21■■□□□ 1.15
SCAMP4-204ENST00000414057 WDR43Q15061 677 aaKnown RBP eCLIP22.2■■□□□ 1.14
SCAMP4-204ENST00000414057 ATP10DQ9P241 1426 aa22.2■■□□□ 1.14
SCAMP4-204ENST00000414057 SIPA1L3O60292 1781 aaPredicted RBP22.19■■□□□ 1.14
SCAMP4-204ENST00000414057 GPBP1L1Q9HC44 474 aaPredicted RBP22.19■■□□□ 1.14
SCAMP4-204ENST00000414057 ZNF330Q9Y3S2 320 aaPredicted RBP22.19■■□□□ 1.14
SCAMP4-204ENST00000414057 SERPINB2P05120 415 aa22.18■■□□□ 1.14
SCAMP4-204ENST00000414057 SNRPA1P09661 255 aaKnown RBP22.18■■□□□ 1.14
SCAMP4-204ENST00000414057 TAF7Q15545 349 aaPredicted RBP22.18■■□□□ 1.14
SCAMP4-204ENST00000414057 DALRD3Q5D0E6 543 aaKnown RBP22.18■■□□□ 1.14
SCAMP4-204ENST00000414057 ARHGAP27Q6ZUM4 889 aa22.18■■□□□ 1.14
SCAMP4-204ENST00000414057 BCL2L12Q9HB09 334 aa22.18■■□□□ 1.14
SCAMP4-204ENST00000414057 KCNQ3O43525 872 aa22.17■■□□□ 1.14
SCAMP4-204ENST00000414057 KCNA3P22001 575 aa22.17■■□□□ 1.14
SCAMP4-204ENST00000414057 ADCY9O60503 1353 aa22.17■■□□□ 1.14
SCAMP4-204ENST00000414057 MAPK8IP3Q9UPT6 1336 aa22.17■■□□□ 1.14
SCAMP4-204ENST00000414057 KIAA1551Q9HCM1 1747 aa22.16■■□□□ 1.14
SCAMP4-204ENST00000414057 DCTN1Q14203 1278 aa22.16■■□□□ 1.14
SCAMP4-204ENST00000414057 N4BP2Q86UW6 1770 aaPredicted RBP22.16■■□□□ 1.14
SCAMP4-204ENST00000414057 ZBED9Q6R2W3 1325 aa22.16■■□□□ 1.14
SCAMP4-204ENST00000414057 A1BGP04217 495 aa22.15■■□□□ 1.14
SCAMP4-204ENST00000414057 TBC1D2BQ9UPU7 963 aa22.15■■□□□ 1.14
SCAMP4-204ENST00000414057 CHRNA5P30532 468 aa22.14■■□□□ 1.13
SCAMP4-204ENST00000414057 BICDL1Q6ZP65 573 aa22.14■■□□□ 1.13
SCAMP4-204ENST00000414057 PLEKHF1Q96S99 279 aa22.14■■□□□ 1.13
SCAMP4-204ENST00000414057 USP16Q9Y5T5 823 aa22.14■■□□□ 1.13
SCAMP4-204ENST00000414057 NFE2L2Q16236 605 aa22.13■■□□□ 1.13
SCAMP4-204ENST00000414057 PDZRN3Q9UPQ7 1066 aa22.12■■□□□ 1.13
SCAMP4-204ENST00000414057 TBC1D9BQ66K14 1250 aa22.11■■□□□ 1.13
SCAMP4-204ENST00000414057 DZIP3Q86Y13 1208 aaKnown RBP22.11■■□□□ 1.13
SCAMP4-204ENST00000414057 ADAMTS8Q9UP79 889 aa22.11■■□□□ 1.13
SCAMP4-204ENST00000414057 H0YIN7 160 aa22.1■■□□□ 1.13
SCAMP4-204ENST00000414057 ZNF526Q8TF50 670 aaPredicted RBP22.1■■□□□ 1.13
SCAMP4-204ENST00000414057 SETDB2Q96T68 719 aa22.1■■□□□ 1.13
SCAMP4-204ENST00000414057 CARMIL3Q8ND23 1372 aa22.1■■□□□ 1.13
SCAMP4-204ENST00000414057 NPHP1O15259 732 aa22.09■■□□□ 1.13
SCAMP4-204ENST00000414057 ZNF652Q9Y2D9 606 aa22.09■■□□□ 1.13
SCAMP4-204ENST00000414057 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
SCAMP4-204ENST00000414057 CAMTA2O94983 1202 aa22.09■■□□□ 1.13
SCAMP4-204ENST00000414057 PDE6BP35913 854 aa22.09■■□□□ 1.13
SCAMP4-204ENST00000414057 CLEC4GQ6UXB4 293 aa22.09■■□□□ 1.13
SCAMP4-204ENST00000414057 PRAMEF22A3QJZ6 481 aa22.08■■□□□ 1.12
SCAMP4-204ENST00000414057 C2CD5Q86YS7 1000 aa22.08■■□□□ 1.12
SCAMP4-204ENST00000414057 NRXN2Q9P2S2 1712 aa22.07■■□□□ 1.12
SCAMP4-204ENST00000414057 BRCA1P38398 1863 aaKnown RBP22.07■■□□□ 1.12
SCAMP4-204ENST00000414057 RGL2O15211 777 aa22.07■■□□□ 1.12
SCAMP4-204ENST00000414057 TTLL6Q8N841 843 aa22.07■■□□□ 1.12
SCAMP4-204ENST00000414057 BRIP1Q9BX63 1249 aa22.07■■□□□ 1.12
SCAMP4-204ENST00000414057 MIS18AQ9NYP9 233 aa22.07■■□□□ 1.12
SCAMP4-204ENST00000414057 SCN7AQ01118 1682 aa22.06■■□□□ 1.12
SCAMP4-204ENST00000414057 ST5P78524 1137 aa22.05■■□□□ 1.12
SCAMP4-204ENST00000414057 LMOD3Q0VAK6 560 aa22.05■■□□□ 1.12
SCAMP4-204ENST00000414057 NGEFQ8N5V2 710 aa22.05■■□□□ 1.12
SCAMP4-204ENST00000414057 CNBD1Q8NA66 436 aa22.05■■□□□ 1.12
SCAMP4-204ENST00000414057 ARFGEF1Q9Y6D6 1849 aa22.05■■□□□ 1.12
SCAMP4-204ENST00000414057 PIP4K2AP48426 406 aaPredicted RBP22.04■■□□□ 1.12
SCAMP4-204ENST00000414057 AFDNP55196 1824 aaKnown RBP22.04■■□□□ 1.12
SCAMP4-204ENST00000414057 C9orf131Q5VYM1 1079 aa22.04■■□□□ 1.12
SCAMP4-204ENST00000414057 PRR5LQ6MZQ0 368 aa22.04■■□□□ 1.12
SCAMP4-204ENST00000414057 RIPK4P57078 832 aa22.03■■□□□ 1.12
SCAMP4-204ENST00000414057 NBPF26B4DH59 902 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms