RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 HSPA4P34932 840 aa17.58■□□□□ 0.4
SEMA3F-202ENST00000413852 TERF1P54274 439 aa17.58■□□□□ 0.4
SEMA3F-202ENST00000413852 UBTFL1P0CB47 393 aaPredicted RBP17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 CASTP20810 708 aaKnown RBP17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 SYAP1Q96A49 352 aaPredicted RBP17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 VPS37CA5D8V6 355 aaPredicted RBP17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 AMPHP49418 695 aa17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 MCM2P49736 904 aa17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 PTH1RQ03431 593 aa17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 INTS4Q96HW7 963 aaKnown RBP17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 SLC26A8Q96RN1 970 aa17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 DLC1Q96QB1 1528 aa17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 SPDYE4A6NLX3 237 aa17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 IGSF3O75054 1194 aa17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 ZSCAN22P10073 491 aaPredicted RBP17.57■□□□□ 0.4
SEMA3F-202ENST00000413852 ROBO2Q9HCK4 1378 aa17.56■□□□□ 0.4
SEMA3F-202ENST00000413852 SRGAP3O43295 1099 aa17.56■□□□□ 0.4
SEMA3F-202ENST00000413852 STX6O43752 255 aa17.56■□□□□ 0.4
SEMA3F-202ENST00000413852 MCM5P33992 734 aa17.55■□□□□ 0.4
SEMA3F-202ENST00000413852 CCDC183Q5T5S1 534 aa17.55■□□□□ 0.4
SEMA3F-202ENST00000413852 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
SEMA3F-202ENST00000413852 PI4K2BQ8TCG2 481 aa17.55■□□□□ 0.4
SEMA3F-202ENST00000413852 GNAI3P08754 354 aa17.55■□□□□ 0.4
SEMA3F-202ENST00000413852 HAP1P54257 671 aaPredicted RBP17.55■□□□□ 0.4
SEMA3F-202ENST00000413852 KCNF1Q9H3M0 494 aa17.55■□□□□ 0.4
SEMA3F-202ENST00000413852 SMC3Q9UQE7 1217 aa17.55■□□□□ 0.4
SEMA3F-202ENST00000413852 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 GJB2P29033 226 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 OSCARQ8IYS5 282 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 RHPN1Q8TCX5 695 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 LSG1Q9H089 658 aaKnown RBP17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 KCNQ3O43525 872 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 MYRIPQ8NFW9 859 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 PIBF1Q8WXW3 757 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 STAP2Q9UGK3 403 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 PA2G4Q9UQ80 394 aaKnown RBP17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 PEAK1Q9H792 1746 aa17.54■□□□□ 0.4
SEMA3F-202ENST00000413852 SGSM2O43147 1006 aa17.53■□□□□ 0.4
SEMA3F-202ENST00000413852 ANAPC15P60006 121 aa17.53■□□□□ 0.4
SEMA3F-202ENST00000413852 TTC14Q96N46 770 aa17.53■□□□□ 0.4
SEMA3F-202ENST00000413852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
SEMA3F-202ENST00000413852 F13A1P00488 732 aa17.53■□□□□ 0.4
SEMA3F-202ENST00000413852 ATP2B3Q16720 1220 aa17.53■□□□□ 0.4
SEMA3F-202ENST00000413852 CCDC30Q5VVM6 783 aa17.53■□□□□ 0.4
SEMA3F-202ENST00000413852 CYB5RLQ6IPT4 315 aa17.53■□□□□ 0.4
SEMA3F-202ENST00000413852 JAKMIP1Q96N16 626 aaKnown RBP17.53■□□□□ 0.4
SEMA3F-202ENST00000413852 KDM4AO75164 1064 aa17.52■□□□□ 0.4
SEMA3F-202ENST00000413852 ST3GAL1Q11201 340 aa17.52■□□□□ 0.4
SEMA3F-202ENST00000413852 CKAP2LQ8IYA6 745 aa17.52■□□□□ 0.4
SEMA3F-202ENST00000413852 TAF6LQ9Y6J9 622 aa17.52■□□□□ 0.4
SEMA3F-202ENST00000413852 OS9Q13438 667 aaPredicted RBP17.52■□□□□ 0.39
SEMA3F-202ENST00000413852 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.39
SEMA3F-202ENST00000413852 CEP170BQ9Y4F5 1589 aaPredicted RBP17.52■□□□□ 0.39
SEMA3F-202ENST00000413852 PHF14O94880 888 aa17.51■□□□□ 0.39
SEMA3F-202ENST00000413852 TAF7Q15545 349 aaPredicted RBP17.51■□□□□ 0.39
SEMA3F-202ENST00000413852 TFIP11Q9UBB9 837 aaKnown RBP17.51■□□□□ 0.39
SEMA3F-202ENST00000413852 RAD50Q92878 1312 aa17.51■□□□□ 0.39
SEMA3F-202ENST00000413852 PPP4R3BQ5MIZ7 849 aa17.51■□□□□ 0.39
SEMA3F-202ENST00000413852 LIMCH1Q9UPQ0 1083 aa17.51■□□□□ 0.39
SEMA3F-202ENST00000413852 FAM69CQ0P6D2 419 aa17.5■□□□□ 0.39
SEMA3F-202ENST00000413852 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
SEMA3F-202ENST00000413852 LUZP1Q86V48 1076 aa17.5■□□□□ 0.39
SEMA3F-202ENST00000413852 LIG1P18858 919 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 UBE2HP62256 183 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 LRMPQ12912 555 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 STK3Q13188 491 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 NRBP1Q9UHY1 535 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 MTMR6Q9Y217 621 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 NEO1Q92859 1461 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 PPFIA3O75145 1194 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 NAA30Q147X3 362 aaPredicted RBP17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 HYPKQ9NX55 129 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 RICTORQ6R327 1708 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 PTGS1P23219 599 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 ME3Q16798 604 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 NGDNQ8NEJ9 315 aaKnown RBP17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 SSH3Q8TE77 659 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 MAP7D2Q96T17 732 aa17.49■□□□□ 0.39
SEMA3F-202ENST00000413852 PI4KAP2A4QPH2 592 aa17.48■□□□□ 0.39
SEMA3F-202ENST00000413852 PI4KAP1Q8N8J0 262 aa17.48■□□□□ 0.39
SEMA3F-202ENST00000413852 LGR6Q9HBX8 967 aa17.48■□□□□ 0.39
SEMA3F-202ENST00000413852 CHPF2Q9P2E5 772 aa17.48■□□□□ 0.39
SEMA3F-202ENST00000413852 A0A087WWV3 80 aa17.48■□□□□ 0.39
SEMA3F-202ENST00000413852 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
SEMA3F-202ENST00000413852 RIOK3O14730 519 aaKnown RBP17.48■□□□□ 0.39
SEMA3F-202ENST00000413852 FAM227BQ96M60 508 aa17.48■□□□□ 0.39
SEMA3F-202ENST00000413852 FUCA2Q9BTY2 467 aa17.48■□□□□ 0.39
SEMA3F-202ENST00000413852 FOSBP53539 338 aa17.47■□□□□ 0.39
SEMA3F-202ENST00000413852 CDC37L1Q7L3B6 337 aa17.47■□□□□ 0.39
SEMA3F-202ENST00000413852 CCDC94Q9BW85 323 aaPredicted RBP17.47■□□□□ 0.39
SEMA3F-202ENST00000413852 PDRG1Q9NUG6 133 aa17.47■□□□□ 0.39
SEMA3F-202ENST00000413852 NLRP6P59044 892 aa17.47■□□□□ 0.39
SEMA3F-202ENST00000413852 OVOS2A0A0J9YW53 1432 aa17.47■□□□□ 0.39
SEMA3F-202ENST00000413852 OVOS2Q6IE36 1432 aa17.47■□□□□ 0.39
SEMA3F-202ENST00000413852 CHGBP05060 677 aa17.47■□□□□ 0.39
SEMA3F-202ENST00000413852 RBM33Q96EV2 1170 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms