RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 PTF1AQ7RTS3 328 aa14.98□□□□□ -0.01
HDAC9-206ENST00000413380 CHMP4AQ9BY43 222 aa14.98□□□□□ -0.01
HDAC9-206ENST00000413380 MYH14Q7Z406 1995 aaKnown RBP14.97□□□□□ -0.01
HDAC9-206ENST00000413380 SNRPA1P09661 255 aaKnown RBP14.97□□□□□ -0.01
HDAC9-206ENST00000413380 BRPF1P55201 1214 aaPredicted RBP14.97□□□□□ -0.01
HDAC9-206ENST00000413380 ALDH1L2Q3SY69 923 aa14.96□□□□□ -0.01
HDAC9-206ENST00000413380 SLC4A9Q96Q91 983 aa14.96□□□□□ -0.01
HDAC9-206ENST00000413380 LOC102724428A0A0B4J2F2 783 aa14.95□□□□□ -0.02
HDAC9-206ENST00000413380 PLSCR1O15162 318 aa14.95□□□□□ -0.02
HDAC9-206ENST00000413380 TRIM37O94972 964 aa14.95□□□□□ -0.02
HDAC9-206ENST00000413380 RARSP54136 660 aaKnown RBP14.95□□□□□ -0.02
HDAC9-206ENST00000413380 SIK1P57059 783 aa14.95□□□□□ -0.02
HDAC9-206ENST00000413380 TEX13AQ9BXU3 409 aaPredicted RBP14.95□□□□□ -0.02
HDAC9-206ENST00000413380 ERBB4Q15303 1308 aa14.94□□□□□ -0.02
HDAC9-206ENST00000413380 PTCD1O75127 700 aaKnown RBP14.94□□□□□ -0.02
HDAC9-206ENST00000413380 RCAN3Q9UKA8 241 aa14.94□□□□□ -0.02
HDAC9-206ENST00000413380 RNF123Q5XPI4 1314 aa14.93□□□□□ -0.02
HDAC9-206ENST00000413380 N4BP2Q86UW6 1770 aaPredicted RBP14.93□□□□□ -0.02
HDAC9-206ENST00000413380 PRAMEF22A3QJZ6 481 aa14.92□□□□□ -0.02
HDAC9-206ENST00000413380 ELL2O00472 640 aaPredicted RBP14.92□□□□□ -0.02
HDAC9-206ENST00000413380 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
HDAC9-206ENST00000413380 HDGFL1Q5TGJ6 251 aa14.92□□□□□ -0.02
HDAC9-206ENST00000413380 CCDC30Q5VVM6 783 aa14.92□□□□□ -0.02
HDAC9-206ENST00000413380 SSH1Q8WYL5 1049 aa14.92□□□□□ -0.02
HDAC9-206ENST00000413380 C4BP0C0L5 1744 aa14.92□□□□□ -0.02
HDAC9-206ENST00000413380 SLC27A3Q5K4L6 730 aa14.91□□□□□ -0.02
HDAC9-206ENST00000413380 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
HDAC9-206ENST00000413380 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
HDAC9-206ENST00000413380 UBR3Q6ZT12 1888 aa14.91□□□□□ -0.02
HDAC9-206ENST00000413380 CYP19A1P11511 503 aaPredicted RBP14.9□□□□□ -0.02
HDAC9-206ENST00000413380 HMGB2P26583 209 aaKnown RBP14.9□□□□□ -0.02
HDAC9-206ENST00000413380 ITPK1Q13572 414 aa14.9□□□□□ -0.02
HDAC9-206ENST00000413380 PDIA6Q15084 440 aa14.9□□□□□ -0.02
HDAC9-206ENST00000413380 LRP10Q7Z4F1 713 aa14.9□□□□□ -0.02
HDAC9-206ENST00000413380 CCDC125Q86Z20 511 aa14.9□□□□□ -0.02
HDAC9-206ENST00000413380 DNAJC10Q8IXB1 793 aa14.9□□□□□ -0.02
HDAC9-206ENST00000413380 MRPL50Q8N5N7 158 aaKnown RBP14.9□□□□□ -0.02
HDAC9-206ENST00000413380 NUP188Q5SRE5 1749 aa14.89□□□□□ -0.03
HDAC9-206ENST00000413380 STARD3NLO95772 234 aa14.89□□□□□ -0.03
HDAC9-206ENST00000413380 ATP6V1AP38606 617 aa14.89□□□□□ -0.03
HDAC9-206ENST00000413380 DDX21Q9NR30 783 aaKnown RBP eCLIP14.89□□□□□ -0.03
HDAC9-206ENST00000413380 DBF4Q9UBU7 674 aaPredicted RBP14.89□□□□□ -0.03
HDAC9-206ENST00000413380 KIF16BQ96L93 1317 aa14.89□□□□□ -0.03
HDAC9-206ENST00000413380 CNTNAP4Q9C0A0 1308 aa14.89□□□□□ -0.03
HDAC9-206ENST00000413380 QSER1Q2KHR3 1735 aa14.89□□□□□ -0.03
HDAC9-206ENST00000413380 SMC4Q9NTJ3 1288 aa14.88□□□□□ -0.03
HDAC9-206ENST00000413380 BCAR3O75815 825 aa14.87□□□□□ -0.03
HDAC9-206ENST00000413380 APBA3O96018 575 aa14.87□□□□□ -0.03
HDAC9-206ENST00000413380 RC3H1Q5TC82 1133 aaKnown RBP14.87□□□□□ -0.03
HDAC9-206ENST00000413380 PROM2Q8N271 834 aa14.87□□□□□ -0.03
HDAC9-206ENST00000413380 STK31Q9BXU1 1019 aa14.87□□□□□ -0.03
HDAC9-206ENST00000413380 CHPF2Q9P2E5 772 aa14.87□□□□□ -0.03
HDAC9-206ENST00000413380 CCNL1Q9UK58 526 aaPredicted RBP14.87□□□□□ -0.03
HDAC9-206ENST00000413380 TUBGCP6Q96RT7 1819 aa14.87□□□□□ -0.03
HDAC9-206ENST00000413380 BCORQ6W2J9 1755 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 ARFGEF2Q9Y6D5 1785 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 NBPF26B4DH59 902 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 EIF2S2P20042 333 aaKnown RBP14.86□□□□□ -0.03
HDAC9-206ENST00000413380 NBPF14Q5TI25 921 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 NBPF10Q6P3W6 841 aaKnown RBP14.86□□□□□ -0.03
HDAC9-206ENST00000413380 NBPF15Q8N660 670 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 LINC00116Q8NCU8 138 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 ARHGAP45Q92619 1136 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 LRRC4BQ9NT99 713 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 HYPKQ9NX55 129 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 PTPRCP08575 1304 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 C4AP0C0L4 1744 aa14.86□□□□□ -0.03
HDAC9-206ENST00000413380 CRKLP46109 303 aaKnown RBP14.85□□□□□ -0.03
HDAC9-206ENST00000413380 TXNRD1Q16881 649 aa14.85□□□□□ -0.03
HDAC9-206ENST00000413380 INTS5Q6P9B9 1019 aaKnown RBP14.85□□□□□ -0.03
HDAC9-206ENST00000413380 CAMKK2Q96RR4 588 aa14.85□□□□□ -0.03
HDAC9-206ENST00000413380 CCDC87Q9NVE4 849 aa14.85□□□□□ -0.03
HDAC9-206ENST00000413380 PXDNLA1KZ92 1463 aa14.84□□□□□ -0.03
HDAC9-206ENST00000413380 A1BGP04217 495 aa14.84□□□□□ -0.03
HDAC9-206ENST00000413380 IL6STP40189 918 aaPredicted RBP14.84□□□□□ -0.03
HDAC9-206ENST00000413380 RRP1P56182 461 aaKnown RBP14.84□□□□□ -0.03
HDAC9-206ENST00000413380 PROSER3Q2NL68 480 aa14.84□□□□□ -0.03
HDAC9-206ENST00000413380 BCL2L13Q9BXK5 485 aa14.84□□□□□ -0.03
HDAC9-206ENST00000413380 ZBTB1Q9Y2K1 713 aa14.84□□□□□ -0.03
HDAC9-206ENST00000413380 SCN7AQ01118 1682 aa14.84□□□□□ -0.03
HDAC9-206ENST00000413380 ANKRD36CQ5JPF3 1778 aa14.83□□□□□ -0.03
HDAC9-206ENST00000413380 NUP98P52948 1817 aa14.83□□□□□ -0.04
HDAC9-206ENST00000413380 BAG6P46379 1132 aa14.83□□□□□ -0.04
HDAC9-206ENST00000413380 EIF5P55010 431 aaKnown RBP14.83□□□□□ -0.04
HDAC9-206ENST00000413380 FLIIQ13045 1269 aa14.83□□□□□ -0.04
HDAC9-206ENST00000413380 NECTIN2Q92692 538 aa14.83□□□□□ -0.04
HDAC9-206ENST00000413380 IPO8O15397 1037 aaKnown RBP14.82□□□□□ -0.04
HDAC9-206ENST00000413380 G2E3Q7L622 706 aa14.82□□□□□ -0.04
HDAC9-206ENST00000413380 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.82□□□□□ -0.04
HDAC9-206ENST00000413380 IBTKQ9P2D0 1353 aaPredicted RBP14.82□□□□□ -0.04
HDAC9-206ENST00000413380 TCERG1O14776 1098 aaKnown RBP14.81□□□□□ -0.04
HDAC9-206ENST00000413380 RGL2O15211 777 aa14.81□□□□□ -0.04
HDAC9-206ENST00000413380 ANXA1P04083 346 aa14.81□□□□□ -0.04
HDAC9-206ENST00000413380 SF3B2Q13435 895 aaKnown RBP14.81□□□□□ -0.04
HDAC9-206ENST00000413380 ZKSCAN2Q63HK3 967 aa14.81□□□□□ -0.04
HDAC9-206ENST00000413380 ATF7IPQ6VMQ6 1270 aa14.81□□□□□ -0.04
HDAC9-206ENST00000413380 PHAXQ9H814 394 aaKnown RBP14.81□□□□□ -0.04
HDAC9-206ENST00000413380 NOB1Q9ULX3 412 aaKnown RBP14.81□□□□□ -0.04
HDAC9-206ENST00000413380 SUPT16HQ9Y5B9 1047 aaKnown RBP14.81□□□□□ -0.04
HDAC9-206ENST00000413380 RPS6KA4O75676 772 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms