RNA–Protein interactions for RNA: ENST00000413233.1

TPM3P1-201, Transcript of tropomyosin 3 pseudogene 1, humanhuman

BASIC

Gene TPM3P1, Length 747 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P1-201ENST00000413233 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
TPM3P1-201ENST00000413233 PIGBQ92521 554 aa12.5□□□□□ -0.41
TPM3P1-201ENST00000413233 ARXQ96QS3 562 aa12.5□□□□□ -0.41
TPM3P1-201ENST00000413233 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
TPM3P1-201ENST00000413233 GPR162Q16538 588 aa12.49□□□□□ -0.41
TPM3P1-201ENST00000413233 FMNL2Q96PY5 1086 aa12.49□□□□□ -0.41
TPM3P1-201ENST00000413233 MBIPQ9NS73 344 aa12.49□□□□□ -0.41
TPM3P1-201ENST00000413233 ERBB4Q15303 1308 aa12.48□□□□□ -0.41
TPM3P1-201ENST00000413233 FANCIQ9NVI1 1328 aa12.48□□□□□ -0.41
TPM3P1-201ENST00000413233 EIF4A1P60842 406 aaKnown RBP12.48□□□□□ -0.41
TPM3P1-201ENST00000413233 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
TPM3P1-201ENST00000413233 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
TPM3P1-201ENST00000413233 TOGARAM1Q9Y4F4 1720 aa12.48□□□□□ -0.41
TPM3P1-201ENST00000413233 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
TPM3P1-201ENST00000413233 SNRPA1P09661 255 aaKnown RBP12.47□□□□□ -0.41
TPM3P1-201ENST00000413233 BRPF1P55201 1214 aaPredicted RBP12.47□□□□□ -0.41
TPM3P1-201ENST00000413233 SLC27A3Q5K4L6 730 aa12.47□□□□□ -0.41
TPM3P1-201ENST00000413233 THUMPD2Q9BTF0 503 aaKnown RBP12.47□□□□□ -0.41
TPM3P1-201ENST00000413233 ATG3Q9NT62 314 aa12.47□□□□□ -0.41
TPM3P1-201ENST00000413233 DOT1LQ8TEK3 1739 aa12.47□□□□□ -0.41
TPM3P1-201ENST00000413233 BTAF1O14981 1849 aa12.46□□□□□ -0.41
TPM3P1-201ENST00000413233 VIRMAQ69YN4 1812 aaKnown RBP12.46□□□□□ -0.41
TPM3P1-201ENST00000413233 QSER1Q2KHR3 1735 aa12.46□□□□□ -0.41
TPM3P1-201ENST00000413233 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
TPM3P1-201ENST00000413233 ITGB4P16144 1822 aa12.46□□□□□ -0.42
TPM3P1-201ENST00000413233 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
TPM3P1-201ENST00000413233 ALDH1L2Q3SY69 923 aa12.45□□□□□ -0.42
TPM3P1-201ENST00000413233 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
TPM3P1-201ENST00000413233 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
TPM3P1-201ENST00000413233 SYTL4Q96C24 671 aaPredicted RBP12.45□□□□□ -0.42
TPM3P1-201ENST00000413233 UBR2Q8IWV8 1755 aa12.45□□□□□ -0.42
TPM3P1-201ENST00000413233 PALLDQ8WX93 1383 aa12.44□□□□□ -0.42
TPM3P1-201ENST00000413233 KAT6BQ8WYB5 2073 aa12.44□□□□□ -0.42
TPM3P1-201ENST00000413233 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
TPM3P1-201ENST00000413233 KCPQ6ZWJ8 1503 aa12.44□□□□□ -0.42
TPM3P1-201ENST00000413233 CENPBP07199 599 aaPredicted RBP12.44□□□□□ -0.42
TPM3P1-201ENST00000413233 CDCA7LQ96GN5 454 aa12.44□□□□□ -0.42
TPM3P1-201ENST00000413233 LOC102724428A0A0B4J2F2 783 aa12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 VAMP4O75379 141 aa12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 STARD3NLO95772 234 aa12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 SIK1P57059 783 aa12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 TWISTNBQ3B726 338 aaPredicted RBP12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 CCDC30Q5VVM6 783 aa12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 ACSBG1Q96GR2 724 aa12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 YTHDC1Q96MU7 727 aaKnown RBP12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 ASAP1Q9ULH1 1129 aa12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 LAS1LQ9Y4W2 734 aaKnown RBP12.43□□□□□ -0.42
TPM3P1-201ENST00000413233 RGL2O15211 777 aa12.42□□□□□ -0.42
TPM3P1-201ENST00000413233 EXOSC9Q06265 439 aaKnown RBP12.42□□□□□ -0.42
TPM3P1-201ENST00000413233 ZNF827Q17R98 1081 aa12.42□□□□□ -0.42
TPM3P1-201ENST00000413233 RC3H1Q5TC82 1133 aaKnown RBP12.42□□□□□ -0.42
TPM3P1-201ENST00000413233 SLC39A6Q13433 755 aa12.41□□□□□ -0.42
TPM3P1-201ENST00000413233 TSR2Q969E8 191 aaKnown RBP12.41□□□□□ -0.42
TPM3P1-201ENST00000413233 LY75O60449 1722 aa12.4□□□□□ -0.42
TPM3P1-201ENST00000413233 CHRDL2Q6WN34 429 aa12.4□□□□□ -0.42
TPM3P1-201ENST00000413233 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
TPM3P1-201ENST00000413233 MIS18AQ9NYP9 233 aa12.4□□□□□ -0.42
TPM3P1-201ENST00000413233 DBF4Q9UBU7 674 aaPredicted RBP12.4□□□□□ -0.42
TPM3P1-201ENST00000413233 CNTNAP4Q9C0A0 1308 aa12.39□□□□□ -0.43
TPM3P1-201ENST00000413233 POLD1P28340 1107 aa12.39□□□□□ -0.43
TPM3P1-201ENST00000413233 NLGN2Q8NFZ4 835 aa12.39□□□□□ -0.43
TPM3P1-201ENST00000413233 ARHGAP45Q92619 1136 aa12.39□□□□□ -0.43
TPM3P1-201ENST00000413233 KCNQ3O43525 872 aa12.38□□□□□ -0.43
TPM3P1-201ENST00000413233 ATP6V1AP38606 617 aa12.38□□□□□ -0.43
TPM3P1-201ENST00000413233 HDGFL1Q5TGJ6 251 aa12.38□□□□□ -0.43
TPM3P1-201ENST00000413233 STK31Q9BXU1 1019 aa12.38□□□□□ -0.43
TPM3P1-201ENST00000413233 DDX21Q9NR30 783 aaKnown RBP eCLIP12.38□□□□□ -0.43
TPM3P1-201ENST00000413233 HYPKQ9NX55 129 aa12.38□□□□□ -0.43
TPM3P1-201ENST00000413233 C5P01031 1676 aa12.38□□□□□ -0.43
TPM3P1-201ENST00000413233 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 CYP19A1P11511 503 aaPredicted RBP12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 MS4A1P11836 297 aa12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 IL6STP40189 918 aaPredicted RBP12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 RARSP54136 660 aaKnown RBP12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 LRRC4BQ9NT99 713 aa12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 PTPRCP08575 1304 aa12.37□□□□□ -0.43
TPM3P1-201ENST00000413233 CACNA1FO60840 1977 aa12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 LAMB4A4D0S4 1761 aa12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 YBX3P16989 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 TSPYL6Q8N831 410 aa12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 FLAD1Q8NFF5 587 aa12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 SLC16A10Q8TF71 515 aa12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 AKT1S1Q96B36 256 aa12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 RCAN3Q9UKA8 241 aa12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 PNPLA7Q6ZV29 1317 aa12.36□□□□□ -0.43
TPM3P1-201ENST00000413233 A0A087WZG4 1122 aa12.35□□□□□ -0.43
TPM3P1-201ENST00000413233 HSPA6P17066 643 aa12.35□□□□□ -0.43
TPM3P1-201ENST00000413233 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
TPM3P1-201ENST00000413233 GRIN3BO60391 1043 aa12.34□□□□□ -0.43
TPM3P1-201ENST00000413233 DNAJC10Q8IXB1 793 aa12.34□□□□□ -0.43
TPM3P1-201ENST00000413233 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms