RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 KDRP35968 1356 aa13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 SMG6Q86US8 1419 aaKnown RBP13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 TM4SF1P30408 202 aa13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 GRM1Q13255 1194 aa13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 EAPPQ56P03 285 aaPredicted RBP13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 PRPF38BQ5VTL8 546 aaKnown RBP13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 TERF2IPQ9NYB0 399 aa13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 ZNF219Q9P2Y4 722 aaPredicted RBP13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 WASHC2AQ641Q2 1341 aa13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
SOX9-AS1-201ENST00000412640 HSP90AB2PQ58FF8 381 aa13.06□□□□□ -0.32
SOX9-AS1-201ENST00000412640 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
SOX9-AS1-201ENST00000412640 TAF1DQ9H5J8 278 aaPredicted RBP13.06□□□□□ -0.32
SOX9-AS1-201ENST00000412640 USP42Q9H9J4 1324 aaKnown RBP13.06□□□□□ -0.32
SOX9-AS1-201ENST00000412640 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
SOX9-AS1-201ENST00000412640 SOX10P56693 466 aa13.05□□□□□ -0.32
SOX9-AS1-201ENST00000412640 DDX10Q13206 875 aaKnown RBP13.05□□□□□ -0.32
SOX9-AS1-201ENST00000412640 DGKZQ13574 1117 aa13.05□□□□□ -0.32
SOX9-AS1-201ENST00000412640 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
SOX9-AS1-201ENST00000412640 SPG7Q9UQ90 795 aa13.05□□□□□ -0.32
SOX9-AS1-201ENST00000412640 IQCA1LA6NCM1 817 aa13.04□□□□□ -0.32
SOX9-AS1-201ENST00000412640 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
SOX9-AS1-201ENST00000412640 CAPNS2Q96L46 248 aa13.04□□□□□ -0.32
SOX9-AS1-201ENST00000412640 GPR101Q96P66 508 aaPredicted RBP13.04□□□□□ -0.32
SOX9-AS1-201ENST00000412640 MYH14Q7Z406 1995 aaKnown RBP13.03□□□□□ -0.32
SOX9-AS1-201ENST00000412640 COL5A3P25940 1745 aaPredicted RBP13.03□□□□□ -0.32
SOX9-AS1-201ENST00000412640 C21orf2O43822 256 aa13.03□□□□□ -0.32
SOX9-AS1-201ENST00000412640 MAP1SQ66K74 1059 aaPredicted RBP13.03□□□□□ -0.32
SOX9-AS1-201ENST00000412640 CYP4F22Q6NT55 531 aa13.03□□□□□ -0.32
SOX9-AS1-201ENST00000412640 CNTROBQ8N137 903 aa13.03□□□□□ -0.32
SOX9-AS1-201ENST00000412640 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.33
SOX9-AS1-201ENST00000412640 DICER1Q9UPY3 1922 aaKnown RBP13.01□□□□□ -0.33
SOX9-AS1-201ENST00000412640 H0YIN7 160 aa13.01□□□□□ -0.33
SOX9-AS1-201ENST00000412640 PHKG2P15735 406 aa13.01□□□□□ -0.33
SOX9-AS1-201ENST00000412640 USPL1Q5W0Q7 1092 aa13.01□□□□□ -0.33
SOX9-AS1-201ENST00000412640 KIF7Q2M1P5 1343 aa13.01□□□□□ -0.33
SOX9-AS1-201ENST00000412640 INSRP06213 1382 aa13.01□□□□□ -0.33
SOX9-AS1-201ENST00000412640 CASP8AP2Q9UKL3 1982 aa13□□□□□ -0.33
SOX9-AS1-201ENST00000412640 DLEC1Q9Y238 1755 aa13□□□□□ -0.33
SOX9-AS1-201ENST00000412640 AOC2O75106 756 aa13□□□□□ -0.33
SOX9-AS1-201ENST00000412640 FMR1Q06787 632 aaKnown RBP eCLIP13□□□□□ -0.33
SOX9-AS1-201ENST00000412640 NFIXQ14938 502 aa13□□□□□ -0.33
SOX9-AS1-201ENST00000412640 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
SOX9-AS1-201ENST00000412640 ZNF622Q969S3 477 aaKnown RBP eCLIP13□□□□□ -0.33
SOX9-AS1-201ENST00000412640 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
SOX9-AS1-201ENST00000412640 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
SOX9-AS1-201ENST00000412640 ZPR1O75312 459 aa12.99□□□□□ -0.33
SOX9-AS1-201ENST00000412640 SERPINB2P05120 415 aa12.99□□□□□ -0.33
SOX9-AS1-201ENST00000412640 ECE1P42892 770 aa12.99□□□□□ -0.33
SOX9-AS1-201ENST00000412640 AFDNP55196 1824 aaKnown RBP12.99□□□□□ -0.33
SOX9-AS1-201ENST00000412640 LTBP1Q14766 1721 aa12.99□□□□□ -0.33
SOX9-AS1-201ENST00000412640 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
SOX9-AS1-201ENST00000412640 THSD7BQ9C0I4 1608 aa12.99□□□□□ -0.33
SOX9-AS1-201ENST00000412640 CARMIL3Q8ND23 1372 aa12.98□□□□□ -0.33
SOX9-AS1-201ENST00000412640 ST20-MTHFSA0A0A6YYL1 179 aa12.98□□□□□ -0.33
SOX9-AS1-201ENST00000412640 EPHX2P34913 555 aa12.98□□□□□ -0.33
SOX9-AS1-201ENST00000412640 TAOK3Q9H2K8 898 aa12.98□□□□□ -0.33
SOX9-AS1-201ENST00000412640 GGNBP2Q9H3C7 697 aa12.98□□□□□ -0.33
SOX9-AS1-201ENST00000412640 DDX21Q9NR30 783 aaKnown RBP eCLIP12.98□□□□□ -0.33
SOX9-AS1-201ENST00000412640 HACL1Q9UJ83 578 aa12.98□□□□□ -0.33
SOX9-AS1-201ENST00000412640 SCN4AP35499 1836 aa12.97□□□□□ -0.33
SOX9-AS1-201ENST00000412640 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
SOX9-AS1-201ENST00000412640 LTBP3Q9NS15 1303 aa12.96□□□□□ -0.33
SOX9-AS1-201ENST00000412640 INTS5Q6P9B9 1019 aaKnown RBP12.96□□□□□ -0.33
SOX9-AS1-201ENST00000412640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.33
SOX9-AS1-201ENST00000412640 ADAMTSL1Q8N6G6 1762 aa12.96□□□□□ -0.34
SOX9-AS1-201ENST00000412640 FLT4P35916 1363 aa12.95□□□□□ -0.34
SOX9-AS1-201ENST00000412640 TESK2Q96S53 571 aa12.95□□□□□ -0.34
SOX9-AS1-201ENST00000412640 ADAMTS7Q9UKP4 1686 aa12.95□□□□□ -0.34
SOX9-AS1-201ENST00000412640 RNF123Q5XPI4 1314 aa12.94□□□□□ -0.34
SOX9-AS1-201ENST00000412640 ZNF541Q9H0D2 1346 aa12.94□□□□□ -0.34
SOX9-AS1-201ENST00000412640 NRXN2Q9P2S2 1712 aa12.94□□□□□ -0.34
SOX9-AS1-201ENST00000412640 ERVV-2B6SEH9 535 aa12.94□□□□□ -0.34
SOX9-AS1-201ENST00000412640 FYB1O15117 783 aa12.94□□□□□ -0.34
SOX9-AS1-201ENST00000412640 CA12O43570 354 aa12.94□□□□□ -0.34
SOX9-AS1-201ENST00000412640 MAP2K2P36507 400 aa12.94□□□□□ -0.34
SOX9-AS1-201ENST00000412640 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
SOX9-AS1-201ENST00000412640 CCDC24Q8N4L8 307 aa12.94□□□□□ -0.34
SOX9-AS1-201ENST00000412640 CCER2I3L3R5 266 aa12.93□□□□□ -0.34
SOX9-AS1-201ENST00000412640 CST9Q5W186 159 aa12.93□□□□□ -0.34
SOX9-AS1-201ENST00000412640 BICDL1Q6ZP65 573 aa12.93□□□□□ -0.34
SOX9-AS1-201ENST00000412640 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
SOX9-AS1-201ENST00000412640 EMILIN1Q9Y6C2 1016 aa12.93□□□□□ -0.34
SOX9-AS1-201ENST00000412640 ANP32CO43423 234 aa12.92□□□□□ -0.34
SOX9-AS1-201ENST00000412640 CABP4P57796 275 aa12.92□□□□□ -0.34
SOX9-AS1-201ENST00000412640 NCAPD2Q15021 1401 aa12.92□□□□□ -0.34
SOX9-AS1-201ENST00000412640 EYA1Q99502 592 aa12.92□□□□□ -0.34
SOX9-AS1-201ENST00000412640 TRAF5O00463 557 aa12.91□□□□□ -0.34
SOX9-AS1-201ENST00000412640 PPM1GO15355 546 aaPredicted RBP12.91□□□□□ -0.34
SOX9-AS1-201ENST00000412640 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
SOX9-AS1-201ENST00000412640 HABP4Q5JVS0 413 aaKnown RBP12.91□□□□□ -0.34
SOX9-AS1-201ENST00000412640 NARFQ9UHQ1 456 aa12.91□□□□□ -0.34
SOX9-AS1-201ENST00000412640 TLL2Q9Y6L7 1015 aa12.91□□□□□ -0.34
SOX9-AS1-201ENST00000412640 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
SOX9-AS1-201ENST00000412640 CIAPIN1Q6FI81 312 aa12.9□□□□□ -0.34
SOX9-AS1-201ENST00000412640 GCC1Q96CN9 775 aa12.9□□□□□ -0.34
SOX9-AS1-201ENST00000412640 TJP1Q07157 1748 aa12.89□□□□□ -0.35
SOX9-AS1-201ENST00000412640 PDE6BP35913 854 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms