RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 DPEP1P16444 411 aa15.44■□□□□ 0.06
LINC00963-201ENST00000412141 VSIG10Q8N0Z9 540 aa15.44■□□□□ 0.06
LINC00963-201ENST00000412141 BCS1LQ9Y276 419 aa15.44■□□□□ 0.06
LINC00963-201ENST00000412141 VIRMAQ69YN4 1812 aaKnown RBP15.44■□□□□ 0.06
LINC00963-201ENST00000412141 ADAMTS7Q9UKP4 1686 aa15.42■□□□□ 0.06
LINC00963-201ENST00000412141 COL15A1P39059 1388 aa15.42■□□□□ 0.06
LINC00963-201ENST00000412141 NEFMP07197 916 aa15.42■□□□□ 0.06
LINC00963-201ENST00000412141 PIP4K2AP48426 406 aaPredicted RBP15.42■□□□□ 0.06
LINC00963-201ENST00000412141 BICDL1Q6ZP65 573 aa15.42■□□□□ 0.06
LINC00963-201ENST00000412141 FMNL2Q96PY5 1086 aa15.42■□□□□ 0.06
LINC00963-201ENST00000412141 MIS18AQ9NYP9 233 aa15.42■□□□□ 0.06
LINC00963-201ENST00000412141 C4AP0C0L4 1744 aa15.42■□□□□ 0.06
LINC00963-201ENST00000412141 HEG1Q9ULI3 1381 aa15.41■□□□□ 0.06
LINC00963-201ENST00000412141 A1BGP04217 495 aa15.41■□□□□ 0.06
LINC00963-201ENST00000412141 TGFB2P61812 414 aa15.41■□□□□ 0.06
LINC00963-201ENST00000412141 ZNF526Q8TF50 670 aaPredicted RBP15.41■□□□□ 0.06
LINC00963-201ENST00000412141 NARFQ9UHQ1 456 aa15.41■□□□□ 0.06
LINC00963-201ENST00000412141 ATP10DQ9P241 1426 aa15.41■□□□□ 0.06
LINC00963-201ENST00000412141 PXDNLA1KZ92 1463 aa15.4■□□□□ 0.06
LINC00963-201ENST00000412141 CEMIPQ8WUJ3 1361 aa15.4■□□□□ 0.06
LINC00963-201ENST00000412141 PRAMEF22A3QJZ6 481 aa15.4■□□□□ 0.06
LINC00963-201ENST00000412141 POLRMTO00411 1230 aaKnown RBP15.4■□□□□ 0.06
LINC00963-201ENST00000412141 TM4SF1P30408 202 aa15.4■□□□□ 0.06
LINC00963-201ENST00000412141 CHRNA5P30532 468 aa15.4■□□□□ 0.06
LINC00963-201ENST00000412141 NFIXQ14938 502 aa15.4■□□□□ 0.06
LINC00963-201ENST00000412141 TBC1D2BQ9UPU7 963 aa15.4■□□□□ 0.06
LINC00963-201ENST00000412141 C10orf71Q711Q0 1435 aa15.4■□□□□ 0.06
LINC00963-201ENST00000412141 CEP350Q5VT06 3117 aa15.4■□□□□ 0.06
LINC00963-201ENST00000412141 ARHGAP27Q6ZUM4 889 aa15.39■□□□□ 0.05
LINC00963-201ENST00000412141 THUMPD2Q9BTF0 503 aaKnown RBP15.39■□□□□ 0.05
LINC00963-201ENST00000412141 TEX13AQ9BXU3 409 aaPredicted RBP15.39■□□□□ 0.05
LINC00963-201ENST00000412141 BCL2L12Q9HB09 334 aa15.39■□□□□ 0.05
LINC00963-201ENST00000412141 USP16Q9Y5T5 823 aa15.39■□□□□ 0.05
LINC00963-201ENST00000412141 EIF5P55010 431 aaKnown RBP15.38■□□□□ 0.05
LINC00963-201ENST00000412141 NPM2Q86SE8 214 aaKnown RBP15.38■□□□□ 0.05
LINC00963-201ENST00000412141 N4BP2Q86UW6 1770 aaPredicted RBP15.38■□□□□ 0.05
LINC00963-201ENST00000412141 ADCY9O60503 1353 aa15.37■□□□□ 0.05
LINC00963-201ENST00000412141 A0A087WZG4 1122 aa15.37■□□□□ 0.05
LINC00963-201ENST00000412141 SERPINB2P05120 415 aa15.37■□□□□ 0.05
LINC00963-201ENST00000412141 TAF7Q15545 349 aaPredicted RBP15.37■□□□□ 0.05
LINC00963-201ENST00000412141 CCDC24Q8N4L8 307 aa15.37■□□□□ 0.05
LINC00963-201ENST00000412141 KCNA3P22001 575 aa15.36■□□□□ 0.05
LINC00963-201ENST00000412141 RALBP1Q15311 655 aa15.36■□□□□ 0.05
LINC00963-201ENST00000412141 PLEKHF1Q96S99 279 aa15.36■□□□□ 0.05
LINC00963-201ENST00000412141 PIM2Q9P1W9 311 aa15.36■□□□□ 0.05
LINC00963-201ENST00000412141 MAPK8IP3Q9UPT6 1336 aa15.36■□□□□ 0.05
LINC00963-201ENST00000412141 UBR2Q8IWV8 1755 aa15.36■□□□□ 0.05
LINC00963-201ENST00000412141 HTATSF1O43719 755 aaKnown RBP15.35■□□□□ 0.05
LINC00963-201ENST00000412141 SNRPA1P09661 255 aaKnown RBP15.35■□□□□ 0.05
LINC00963-201ENST00000412141 NFE2L2Q16236 605 aa15.35■□□□□ 0.05
LINC00963-201ENST00000412141 TBC1D9BQ66K14 1250 aa15.35■□□□□ 0.05
LINC00963-201ENST00000412141 KIAA1551Q9HCM1 1747 aa15.34■□□□□ 0.05
LINC00963-201ENST00000412141 SIPA1L3O60292 1781 aaPredicted RBP15.34■□□□□ 0.05
LINC00963-201ENST00000412141 IL6STP40189 918 aaPredicted RBP15.34■□□□□ 0.05
LINC00963-201ENST00000412141 DALRD3Q5D0E6 543 aaKnown RBP15.34■□□□□ 0.05
LINC00963-201ENST00000412141 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
LINC00963-201ENST00000412141 NGEFQ8N5V2 710 aa15.33■□□□□ 0.04
LINC00963-201ENST00000412141 GPBP1L1Q9HC44 474 aaPredicted RBP15.33■□□□□ 0.04
LINC00963-201ENST00000412141 KIF13BQ9NQT8 1826 aa15.32■□□□□ 0.04
LINC00963-201ENST00000412141 NPHP1O15259 732 aa15.32■□□□□ 0.04
LINC00963-201ENST00000412141 NEUROD2Q15784 382 aa15.32■□□□□ 0.04
LINC00963-201ENST00000412141 CCDC146Q8IYE0 955 aa15.32■□□□□ 0.04
LINC00963-201ENST00000412141 PNNQ9H307 717 aaKnown RBP15.32■□□□□ 0.04
LINC00963-201ENST00000412141 RRP7AQ9Y3A4 280 aaKnown RBP15.32■□□□□ 0.04
LINC00963-201ENST00000412141 CAMTA2O94983 1202 aa15.31■□□□□ 0.04
LINC00963-201ENST00000412141 RIPK4P57078 832 aa15.31■□□□□ 0.04
LINC00963-201ENST00000412141 C2CD5Q86YS7 1000 aa15.31■□□□□ 0.04
LINC00963-201ENST00000412141 MYBBP1AQ9BQG0 1328 aaKnown RBP15.31■□□□□ 0.04
LINC00963-201ENST00000412141 NBPF26B4DH59 902 aa15.3■□□□□ 0.04
LINC00963-201ENST00000412141 NBPF10Q6P3W6 841 aaKnown RBP15.3■□□□□ 0.04
LINC00963-201ENST00000412141 NBPF15Q8N660 670 aa15.3■□□□□ 0.04
LINC00963-201ENST00000412141 CARMIL3Q8ND23 1372 aa15.3■□□□□ 0.04
LINC00963-201ENST00000412141 SETDB2Q96T68 719 aa15.3■□□□□ 0.04
LINC00963-201ENST00000412141 FAM177BA6PVY3 158 aa15.29■□□□□ 0.04
LINC00963-201ENST00000412141 PNISRQ8TF01 805 aaKnown RBP15.29■□□□□ 0.04
LINC00963-201ENST00000412141 ZNF622Q969S3 477 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC00963-201ENST00000412141 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
LINC00963-201ENST00000412141 H0YIN7 160 aa15.28■□□□□ 0.04
LINC00963-201ENST00000412141 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04
LINC00963-201ENST00000412141 C9orf131Q5VYM1 1079 aa15.28■□□□□ 0.04
LINC00963-201ENST00000412141 PRR5LQ6MZQ0 368 aa15.28■□□□□ 0.04
LINC00963-201ENST00000412141 AFDNP55196 1824 aaKnown RBP15.27■□□□□ 0.04
LINC00963-201ENST00000412141 MYL6BP14649 208 aa15.27■□□□□ 0.04
LINC00963-201ENST00000412141 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.04
LINC00963-201ENST00000412141 EIF4A1P60842 406 aaKnown RBP15.27■□□□□ 0.04
LINC00963-201ENST00000412141 TSPYL4Q9UJ04 414 aa15.27■□□□□ 0.04
LINC00963-201ENST00000412141 DLG5Q8TDM6 1919 aa15.27■□□□□ 0.03
LINC00963-201ENST00000412141 RASSF7Q02833 373 aa15.26■□□□□ 0.03
LINC00963-201ENST00000412141 TTLL6Q8N841 843 aa15.26■□□□□ 0.03
LINC00963-201ENST00000412141 CNBD1Q8NA66 436 aa15.26■□□□□ 0.03
LINC00963-201ENST00000412141 RNF181Q9P0P0 153 aa15.26■□□□□ 0.03
LINC00963-201ENST00000412141 HLFQ16534 295 aa15.25■□□□□ 0.03
LINC00963-201ENST00000412141 NBPF5PQ86XG9 351 aaPredicted RBP15.25■□□□□ 0.03
LINC00963-201ENST00000412141 BRIP1Q9BX63 1249 aa15.25■□□□□ 0.03
LINC00963-201ENST00000412141 ADAMTS8Q9UP79 889 aa15.25■□□□□ 0.03
LINC00963-201ENST00000412141 LAS1LQ9Y4W2 734 aaKnown RBP15.25■□□□□ 0.03
LINC00963-201ENST00000412141 KIF3CO14782 793 aa15.24■□□□□ 0.03
LINC00963-201ENST00000412141 EIF2S2P20042 333 aaKnown RBP15.24■□□□□ 0.03
LINC00963-201ENST00000412141 PDE6BP35913 854 aa15.24■□□□□ 0.03
LINC00963-201ENST00000412141 ST5P78524 1137 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms