RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 DOT1LQ8TEK3 1739 aa11.43□□□□□ -0.58
LINC02539-201ENST00000411615 NHSQ6T4R5 1651 aa11.43□□□□□ -0.58
LINC02539-201ENST00000411615 CHL1O00533 1208 aa11.43□□□□□ -0.58
LINC02539-201ENST00000411615 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
LINC02539-201ENST00000411615 GNAI1P63096 354 aa11.43□□□□□ -0.58
LINC02539-201ENST00000411615 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
LINC02539-201ENST00000411615 NFATC2IPQ8NCF5 419 aa11.43□□□□□ -0.58
LINC02539-201ENST00000411615 BCL11BQ9C0K0 894 aaPredicted RBP11.43□□□□□ -0.58
LINC02539-201ENST00000411615 TMOD3Q9NYL9 352 aa11.43□□□□□ -0.58
LINC02539-201ENST00000411615 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
LINC02539-201ENST00000411615 KAT6BQ8WYB5 2073 aa11.42□□□□□ -0.58
LINC02539-201ENST00000411615 E9PSI1 815 aa11.42□□□□□ -0.58
LINC02539-201ENST00000411615 SEC24BO95487 1268 aa11.42□□□□□ -0.58
LINC02539-201ENST00000411615 PIGBQ92521 554 aa11.42□□□□□ -0.58
LINC02539-201ENST00000411615 THUMPD2Q9BTF0 503 aaKnown RBP11.42□□□□□ -0.58
LINC02539-201ENST00000411615 BTBD11A6QL63 1104 aa11.41□□□□□ -0.58
LINC02539-201ENST00000411615 SLFN5Q08AF3 891 aa11.41□□□□□ -0.58
LINC02539-201ENST00000411615 TRMT2AQ8IZ69 625 aaKnown RBP11.41□□□□□ -0.58
LINC02539-201ENST00000411615 MYH16Q9H6N6 1097 aa11.41□□□□□ -0.58
LINC02539-201ENST00000411615 PAPPAQ13219 1627 aa11.4□□□□□ -0.58
LINC02539-201ENST00000411615 FAM182BQ5T319 152 aa11.4□□□□□ -0.58
LINC02539-201ENST00000411615 CCDC125Q86Z20 511 aa11.4□□□□□ -0.58
LINC02539-201ENST00000411615 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.58
LINC02539-201ENST00000411615 KDM3BQ7LBC6 1761 aa11.4□□□□□ -0.58
LINC02539-201ENST00000411615 KCNQ2O43526 872 aa11.39□□□□□ -0.59
LINC02539-201ENST00000411615 HMGB2P26583 209 aaKnown RBP11.39□□□□□ -0.59
LINC02539-201ENST00000411615 ZNF790Q6PG37 636 aa11.39□□□□□ -0.59
LINC02539-201ENST00000411615 SYTL4Q96C24 671 aaPredicted RBP11.39□□□□□ -0.59
LINC02539-201ENST00000411615 ACSBG1Q96GR2 724 aa11.39□□□□□ -0.59
LINC02539-201ENST00000411615 BTAF1O14981 1849 aa11.39□□□□□ -0.59
LINC02539-201ENST00000411615 SOS1Q07889 1333 aaPredicted RBP11.38□□□□□ -0.59
LINC02539-201ENST00000411615 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
LINC02539-201ENST00000411615 MBIPQ9NS73 344 aa11.38□□□□□ -0.59
LINC02539-201ENST00000411615 ATG3Q9NT62 314 aa11.38□□□□□ -0.59
LINC02539-201ENST00000411615 TSPYL4Q9UJ04 414 aa11.38□□□□□ -0.59
LINC02539-201ENST00000411615 ZNF831Q5JPB2 1677 aa11.38□□□□□ -0.59
LINC02539-201ENST00000411615 UBR2Q8IWV8 1755 aa11.38□□□□□ -0.59
LINC02539-201ENST00000411615 PLSCR1O15162 318 aa11.37□□□□□ -0.59
LINC02539-201ENST00000411615 TRIM37O94972 964 aa11.37□□□□□ -0.59
LINC02539-201ENST00000411615 EIF4A1P60842 406 aaKnown RBP11.37□□□□□ -0.59
LINC02539-201ENST00000411615 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
LINC02539-201ENST00000411615 TTC5Q8N0Z6 440 aa11.37□□□□□ -0.59
LINC02539-201ENST00000411615 VSIG10Q8N0Z9 540 aa11.37□□□□□ -0.59
LINC02539-201ENST00000411615 ASAP1Q9ULH1 1129 aa11.37□□□□□ -0.59
LINC02539-201ENST00000411615 HEG1Q9ULI3 1381 aa11.37□□□□□ -0.59
LINC02539-201ENST00000411615 HOXB7P09629 217 aa11.36□□□□□ -0.59
LINC02539-201ENST00000411615 DUSP27Q5VZP5 1158 aa11.36□□□□□ -0.59
LINC02539-201ENST00000411615 CDCA7LQ96GN5 454 aa11.36□□□□□ -0.59
LINC02539-201ENST00000411615 YTHDC1Q96MU7 727 aaKnown RBP11.36□□□□□ -0.59
LINC02539-201ENST00000411615 FMNL2Q96PY5 1086 aa11.36□□□□□ -0.59
LINC02539-201ENST00000411615 CHMP4AQ9BY43 222 aa11.36□□□□□ -0.59
LINC02539-201ENST00000411615 MIS18AQ9NYP9 233 aa11.36□□□□□ -0.59
LINC02539-201ENST00000411615 LAS1LQ9Y4W2 734 aaKnown RBP11.36□□□□□ -0.59
LINC02539-201ENST00000411615 RGPD3A6NKT7 1758 aaPredicted RBP11.36□□□□□ -0.59
LINC02539-201ENST00000411615 RGPD4Q7Z3J3 1758 aa11.36□□□□□ -0.59
LINC02539-201ENST00000411615 FANCIQ9NVI1 1328 aa11.35□□□□□ -0.59
LINC02539-201ENST00000411615 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
LINC02539-201ENST00000411615 CICQ96RK0 1608 aaPredicted RBP11.35□□□□□ -0.59
LINC02539-201ENST00000411615 LY75O60449 1722 aa11.35□□□□□ -0.59
LINC02539-201ENST00000411615 TNS1Q9HBL0 1735 aaKnown RBP11.35□□□□□ -0.59
LINC02539-201ENST00000411615 CT47B1P0C2W7 299 aaPredicted RBP11.35□□□□□ -0.59
LINC02539-201ENST00000411615 CHRM1P11229 460 aaPredicted RBP11.35□□□□□ -0.59
LINC02539-201ENST00000411615 SLC39A6Q13433 755 aa11.35□□□□□ -0.59
LINC02539-201ENST00000411615 PTF1AQ7RTS3 328 aa11.35□□□□□ -0.59
LINC02539-201ENST00000411615 TEX13AQ9BXU3 409 aaPredicted RBP11.35□□□□□ -0.59
LINC02539-201ENST00000411615 PALLDQ8WX93 1383 aa11.34□□□□□ -0.59
LINC02539-201ENST00000411615 KCNQ3O43525 872 aa11.34□□□□□ -0.59
LINC02539-201ENST00000411615 SNRPA1P09661 255 aaKnown RBP11.34□□□□□ -0.59
LINC02539-201ENST00000411615 PSEN1P49768 467 aa11.34□□□□□ -0.59
LINC02539-201ENST00000411615 TSR2Q969E8 191 aaKnown RBP11.34□□□□□ -0.59
LINC02539-201ENST00000411615 ZNF428Q96B54 188 aa11.34□□□□□ -0.59
LINC02539-201ENST00000411615 ZNF496Q96IT1 587 aaPredicted RBP11.34□□□□□ -0.59
LINC02539-201ENST00000411615 EP400Q96L91 3159 aa11.33□□□□□ -0.6
LINC02539-201ENST00000411615 LOC102724428A0A0B4J2F2 783 aa11.33□□□□□ -0.6
LINC02539-201ENST00000411615 GIGYF1O75420 1035 aaPredicted RBP11.33□□□□□ -0.6
LINC02539-201ENST00000411615 APBA3O96018 575 aa11.33□□□□□ -0.6
LINC02539-201ENST00000411615 SIK1P57059 783 aa11.33□□□□□ -0.6
LINC02539-201ENST00000411615 SF3B2Q13435 895 aaKnown RBP11.33□□□□□ -0.6
LINC02539-201ENST00000411615 SLC27A3Q5K4L6 730 aa11.33□□□□□ -0.6
LINC02539-201ENST00000411615 IER5LQ5T953 404 aa11.33□□□□□ -0.6
LINC02539-201ENST00000411615 ZNF467Q7Z7K2 595 aaPredicted RBP11.32□□□□□ -0.6
LINC02539-201ENST00000411615 PTCD1O75127 700 aaKnown RBP11.31□□□□□ -0.6
LINC02539-201ENST00000411615 VAMP4O75379 141 aa11.31□□□□□ -0.6
LINC02539-201ENST00000411615 BAG6P46379 1132 aa11.31□□□□□ -0.6
LINC02539-201ENST00000411615 EXOSC9Q06265 439 aaKnown RBP11.31□□□□□ -0.6
LINC02539-201ENST00000411615 LCE2DQ5TA82 110 aaPredicted RBP11.31□□□□□ -0.6
LINC02539-201ENST00000411615 C8orf58Q8NAV2 365 aa11.31□□□□□ -0.6
LINC02539-201ENST00000411615 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
LINC02539-201ENST00000411615 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
LINC02539-201ENST00000411615 CACNA1FO60840 1977 aa11.3□□□□□ -0.6
LINC02539-201ENST00000411615 STARD3NLO95772 234 aa11.3□□□□□ -0.6
LINC02539-201ENST00000411615 ATP6V1AP38606 617 aa11.3□□□□□ -0.6
LINC02539-201ENST00000411615 TWISTNBQ3B726 338 aaPredicted RBP11.3□□□□□ -0.6
LINC02539-201ENST00000411615 ILDR2Q71H61 639 aa11.3□□□□□ -0.6
LINC02539-201ENST00000411615 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC02539-201ENST00000411615 LAMB4A4D0S4 1761 aa11.3□□□□□ -0.6
LINC02539-201ENST00000411615 ERBB4Q15303 1308 aa11.3□□□□□ -0.6
LINC02539-201ENST00000411615 TJP1Q07157 1748 aa11.29□□□□□ -0.6
LINC02539-201ENST00000411615 PLCG2P16885 1265 aa11.29□□□□□ -0.6
LINC02539-201ENST00000411615 TXNRD1Q16881 649 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms