RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 STARD3NLO95772 234 aa12.28□□□□□ -0.44
RN7SKP3-201ENST00000411409 EIF4A1P60842 406 aaKnown RBP12.28□□□□□ -0.44
RN7SKP3-201ENST00000411409 CCNL1Q9UK58 526 aaPredicted RBP12.28□□□□□ -0.44
RN7SKP3-201ENST00000411409 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
RN7SKP3-201ENST00000411409 UBR2Q8IWV8 1755 aa12.28□□□□□ -0.44
RN7SKP3-201ENST00000411409 CT47B1P0C2W7 299 aaPredicted RBP12.27□□□□□ -0.45
RN7SKP3-201ENST00000411409 ATP6V1AP38606 617 aa12.27□□□□□ -0.45
RN7SKP3-201ENST00000411409 PTF1AQ7RTS3 328 aa12.27□□□□□ -0.45
RN7SKP3-201ENST00000411409 FLAD1Q8NFF5 587 aa12.27□□□□□ -0.45
RN7SKP3-201ENST00000411409 ZNF428Q96B54 188 aa12.27□□□□□ -0.45
RN7SKP3-201ENST00000411409 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.45
RN7SKP3-201ENST00000411409 SPON1Q9HCB6 807 aa12.27□□□□□ -0.45
RN7SKP3-201ENST00000411409 ERBB4Q15303 1308 aa12.27□□□□□ -0.45
RN7SKP3-201ENST00000411409 KCPQ6ZWJ8 1503 aa12.27□□□□□ -0.45
RN7SKP3-201ENST00000411409 KDM3BQ7LBC6 1761 aa12.26□□□□□ -0.45
RN7SKP3-201ENST00000411409 HNRNPUQ00839 825 aaKnown RBP eCLIP12.26□□□□□ -0.45
RN7SKP3-201ENST00000411409 ZNF496Q96IT1 587 aaPredicted RBP12.26□□□□□ -0.45
RN7SKP3-201ENST00000411409 CNTNAP4Q9C0A0 1308 aa12.26□□□□□ -0.45
RN7SKP3-201ENST00000411409 GIGYF1O75420 1035 aaPredicted RBP12.25□□□□□ -0.45
RN7SKP3-201ENST00000411409 SLC39A6Q13433 755 aa12.25□□□□□ -0.45
RN7SKP3-201ENST00000411409 TRMT2AQ8IZ69 625 aaKnown RBP12.25□□□□□ -0.45
RN7SKP3-201ENST00000411409 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
RN7SKP3-201ENST00000411409 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
RN7SKP3-201ENST00000411409 RREB1Q92766 1687 aa12.25□□□□□ -0.45
RN7SKP3-201ENST00000411409 RGL2O15211 777 aa12.24□□□□□ -0.45
RN7SKP3-201ENST00000411409 PTCD1O75127 700 aaKnown RBP12.24□□□□□ -0.45
RN7SKP3-201ENST00000411409 C5P01031 1676 aa12.24□□□□□ -0.45
RN7SKP3-201ENST00000411409 SLFN5Q08AF3 891 aa12.24□□□□□ -0.45
RN7SKP3-201ENST00000411409 STK32BQ9NY57 414 aa12.23□□□□□ -0.45
RN7SKP3-201ENST00000411409 LAS1LQ9Y4W2 734 aaKnown RBP12.23□□□□□ -0.45
RN7SKP3-201ENST00000411409 FANCIQ9NVI1 1328 aa12.22□□□□□ -0.45
RN7SKP3-201ENST00000411409 CYP19A1P11511 503 aaPredicted RBP12.22□□□□□ -0.45
RN7SKP3-201ENST00000411409 YY1P25490 414 aa12.22□□□□□ -0.45
RN7SKP3-201ENST00000411409 SLC4A9Q96Q91 983 aa12.22□□□□□ -0.45
RN7SKP3-201ENST00000411409 LRRC4BQ9NT99 713 aa12.22□□□□□ -0.45
RN7SKP3-201ENST00000411409 MIS18AQ9NYP9 233 aa12.22□□□□□ -0.45
RN7SKP3-201ENST00000411409 A0A087WZG4 1122 aa12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 KCNQ3O43525 872 aa12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 RPS6KA4O75676 772 aa12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 SSFA2P28290 1259 aa12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 IL6STP40189 918 aaPredicted RBP12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 ITPK1Q13572 414 aa12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 SLC15A2Q16348 729 aa12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 NPM2Q86SE8 214 aaKnown RBP12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 AK7Q96M32 723 aa12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.45
RN7SKP3-201ENST00000411409 NUP188Q5SRE5 1749 aa12.2□□□□□ -0.46
RN7SKP3-201ENST00000411409 CCDC30Q5VVM6 783 aa12.2□□□□□ -0.46
RN7SKP3-201ENST00000411409 DUSP27Q5VZP5 1158 aa12.2□□□□□ -0.46
RN7SKP3-201ENST00000411409 DNAJC10Q8IXB1 793 aa12.2□□□□□ -0.46
RN7SKP3-201ENST00000411409 SLC16A10Q8TF71 515 aa12.2□□□□□ -0.46
RN7SKP3-201ENST00000411409 CCDC87Q9NVE4 849 aa12.2□□□□□ -0.46
RN7SKP3-201ENST00000411409 RTCBQ9Y3I0 505 aaKnown RBP12.2□□□□□ -0.46
RN7SKP3-201ENST00000411409 TAF1LQ8IZX4 1826 aa12.19□□□□□ -0.46
RN7SKP3-201ENST00000411409 CRKLP46109 303 aaKnown RBP12.19□□□□□ -0.46
RN7SKP3-201ENST00000411409 TWISTNBQ3B726 338 aaPredicted RBP12.19□□□□□ -0.46
RN7SKP3-201ENST00000411409 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
RN7SKP3-201ENST00000411409 LINC00116Q8NCU8 138 aa12.19□□□□□ -0.46
RN7SKP3-201ENST00000411409 DBF4Q9UBU7 674 aaPredicted RBP12.19□□□□□ -0.46
RN7SKP3-201ENST00000411409 C4BP0C0L5 1744 aa12.19□□□□□ -0.46
RN7SKP3-201ENST00000411409 COL5A3P25940 1745 aaPredicted RBP12.19□□□□□ -0.46
RN7SKP3-201ENST00000411409 TJP1Q07157 1748 aa12.18□□□□□ -0.46
RN7SKP3-201ENST00000411409 QSER1Q2KHR3 1735 aa12.18□□□□□ -0.46
RN7SKP3-201ENST00000411409 TRAPPC3LQ5T215 181 aa12.18□□□□□ -0.46
RN7SKP3-201ENST00000411409 INTS5Q6P9B9 1019 aaKnown RBP12.18□□□□□ -0.46
RN7SKP3-201ENST00000411409 DDX21Q9NR30 783 aaKnown RBP eCLIP12.18□□□□□ -0.46
RN7SKP3-201ENST00000411409 HYPKQ9NX55 129 aa12.18□□□□□ -0.46
RN7SKP3-201ENST00000411409 TFCP2L1Q9NZI6 479 aa12.18□□□□□ -0.46
RN7SKP3-201ENST00000411409 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
RN7SKP3-201ENST00000411409 LAMB4A4D0S4 1761 aa12.18□□□□□ -0.46
RN7SKP3-201ENST00000411409 VAMP4O75379 141 aa12.17□□□□□ -0.46
RN7SKP3-201ENST00000411409 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
RN7SKP3-201ENST00000411409 HDGFL1Q5TGJ6 251 aa12.17□□□□□ -0.46
RN7SKP3-201ENST00000411409 TSR2Q969E8 191 aaKnown RBP12.17□□□□□ -0.46
RN7SKP3-201ENST00000411409 ANO8Q9HCE9 1232 aaPredicted RBP12.17□□□□□ -0.46
RN7SKP3-201ENST00000411409 GNPATO15228 680 aa12.16□□□□□ -0.46
RN7SKP3-201ENST00000411409 BRPF1P55201 1214 aaPredicted RBP12.16□□□□□ -0.46
RN7SKP3-201ENST00000411409 EXOSC9Q06265 439 aaKnown RBP12.16□□□□□ -0.46
RN7SKP3-201ENST00000411409 ALDH1L2Q3SY69 923 aa12.16□□□□□ -0.46
RN7SKP3-201ENST00000411409 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
RN7SKP3-201ENST00000411409 STK31Q9BXU1 1019 aa12.16□□□□□ -0.46
RN7SKP3-201ENST00000411409 ZBTB7AO95365 584 aa12.15□□□□□ -0.46
RN7SKP3-201ENST00000411409 CLEC4GQ6UXB4 293 aa12.15□□□□□ -0.46
RN7SKP3-201ENST00000411409 CACNA1FO60840 1977 aa12.14□□□□□ -0.47
RN7SKP3-201ENST00000411409 ERVV-1B6SEH8 477 aa12.14□□□□□ -0.47
RN7SKP3-201ENST00000411409 RFC4P35249 363 aa12.14□□□□□ -0.47
RN7SKP3-201ENST00000411409 ZNF827Q17R98 1081 aa12.14□□□□□ -0.47
RN7SKP3-201ENST00000411409 CDCA7LQ96GN5 454 aa12.14□□□□□ -0.47
RN7SKP3-201ENST00000411409 ZBTB1Q9Y2K1 713 aa12.14□□□□□ -0.47
RN7SKP3-201ENST00000411409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
RN7SKP3-201ENST00000411409 ZPR1O75312 459 aa12.13□□□□□ -0.47
RN7SKP3-201ENST00000411409 DDX58O95786 925 aaKnown RBP12.13□□□□□ -0.47
RN7SKP3-201ENST00000411409 A1BGP04217 495 aa12.13□□□□□ -0.47
RN7SKP3-201ENST00000411409 EIF2S2P20042 333 aaKnown RBP12.13□□□□□ -0.47
RN7SKP3-201ENST00000411409 PDIA6Q15084 440 aa12.13□□□□□ -0.47
RN7SKP3-201ENST00000411409 NLGN1Q8N2Q7 840 aa12.13□□□□□ -0.47
RN7SKP3-201ENST00000411409 NARFQ9UHQ1 456 aa12.13□□□□□ -0.47
RN7SKP3-201ENST00000411409 ZNF652Q9Y2D9 606 aa12.13□□□□□ -0.47
RN7SKP3-201ENST00000411409 COL15A1P39059 1388 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms