RNA–Protein interactions for RNA: ENST00000411293.1

RNU6-1054P-201, Transcript of RNA, U6 small nuclear 1054, pseudogene, humanhuman

BASIC

Gene RNU6-1054P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1054P-201ENST00000411293 PPP1R15AO75807 674 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 AMPD1P23109 780 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 COL8A1P27658 744 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 GATA4P43694 442 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 RGS19P49795 217 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 DBN1Q16643 649 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 INTS6LQ5JSJ4 861 aaKnown RBP2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 TMEM164Q5U3C3 297 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 PDXDC2PQ6P474 469 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 USP17L2Q6R6M4 530 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 USP17L1Q7RTZ2 530 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 NPM2Q86SE8 214 aaKnown RBP2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 CD163Q86VB7 1156 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 RNF135Q8IUD6 432 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 PHTF2Q8N3S3 785 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 EDARADDQ8WWZ3 215 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 GTPBP3Q969Y2 492 aaKnown RBP2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 PRIMPOLQ96LW4 560 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 AGBL1Q96MI9 1066 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 CCDC85AQ96PX6 553 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 HINFPQ9BQA5 517 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 ZNF395Q9H8N7 513 aaPredicted RBP2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 ANO2Q9NQ90 1003 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 SLAIN2Q9P270 581 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 NOVA2Q9UNW9 492 aaKnown RBP2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 MTMR7Q9Y216 660 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 GPSM3Q9Y4H4 160 aa2.17□□□□□ -2.06
RNU6-1054P-201ENST00000411293 TMEM88BA6NKF7 163 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 SFI1A8K8P3 1242 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 USP17L5A8MUK1 530 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 GPR25O00155 361 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 ZBTB7BO15156 539 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 PRMT3O60678 531 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 CLDN10P78369 228 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 DPYDQ12882 1025 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 LBRQ14739 615 aaKnown RBP2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 LARP1Q6PKG0 1096 aaKnown RBP2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 LINC00114Q6XXX2 140 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 PRICKLE2Q7Z3G6 844 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 LSRQ86X29 649 aaPredicted RBP2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 SEPT12Q8IYM1 358 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 OGFOD1Q8N543 542 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 PLPP7Q8NBV4 271 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 FAM200AQ8TCP9 573 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 KLRG1Q96E93 195 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 NUCKS1Q9H1E3 243 aaKnown RBP2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 TMPRSS4Q9NRS4 437 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 ZMIZ1Q9ULJ6 1067 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 KIAA1024Q9UPX6 916 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 IVNS1ABPQ9Y6Y0 642 aa2.16□□□□□ -2.06
RNU6-1054P-201ENST00000411293 SHISA8B8ZZ34 492 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 SOCS7O14512 581 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 PAX4O43316 350 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 ATG7O95352 703 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 F11P03951 625 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 SPATA31C1P0DKV0 1188 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 RHOQP17081 205 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 ITGB7P26010 798 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 SOX11P35716 441 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 PSME1Q06323 249 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 PTK7Q13308 1070 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 LRP8Q14114 963 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 DOC2BQ14184 412 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 NAA30Q147X3 362 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 TBCELQ5QJ74 424 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 TMCO4Q5TGY1 634 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 PHLDB3Q6NSJ2 640 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 SLCO4C1Q6ZQN7 724 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 CAPN12Q6ZSI9 719 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 GAS2L1Q99501 681 aaPredicted RBP2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 SERTAD1Q9UHV2 236 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 DOLKQ9UPQ8 538 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 CCDC9Q9Y3X0 531 aaKnown RBP2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 PCDHB11Q9Y5F2 797 aa2.15□□□□□ -2.07
RNU6-1054P-201ENST00000411293 SPATA31C2B4DYI2 1134 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L15C9J2P7 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L10C9JJH3 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L13C9JLJ4 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L12C9JPN9 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L11C9JVI0 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L21D6R901 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L18D6R9N7 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L22D6RA61 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L17D6RBQ6 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L19D6RCP7 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L20D6RJB6 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 ATP5J2-PTCD1G3V325 749 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 ERVH48-1M5A8F1 160 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 ABL1P00519 1130 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 BMP4P12644 408 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 CHRNA4P43681 627 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 SCTRP47872 440 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 RBM25P49756 843 aaKnown RBP2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 MFAP1P55081 439 aaKnown RBP2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 GTF2IP78347 998 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 KRTAP1-1Q07627 177 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 USP17L24Q0WX57 530 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 EML3Q32P44 896 aa2.14□□□□□ -2.07
RNU6-1054P-201ENST00000411293 SLC27A3Q5K4L6 730 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms