RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 FLIIQ13045 1269 aa13.31□□□□□ -0.28
RN7SKP228-201ENST00000411042 RPAP2Q8IXW5 612 aaPredicted RBP13.31□□□□□ -0.28
RN7SKP228-201ENST00000411042 DBF4Q9UBU7 674 aaPredicted RBP13.31□□□□□ -0.28
RN7SKP228-201ENST00000411042 RBM19Q9Y4C8 960 aaKnown RBP13.31□□□□□ -0.28
RN7SKP228-201ENST00000411042 ZNF790Q6PG37 636 aa13.3□□□□□ -0.28
RN7SKP228-201ENST00000411042 THRAP3Q9Y2W1 955 aaKnown RBP13.3□□□□□ -0.28
RN7SKP228-201ENST00000411042 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
RN7SKP228-201ENST00000411042 HDAC5Q9UQL6 1122 aa13.29□□□□□ -0.28
RN7SKP228-201ENST00000411042 PHLPP1O60346 1717 aa13.29□□□□□ -0.28
RN7SKP228-201ENST00000411042 GNAI3P08754 354 aa13.28□□□□□ -0.28
RN7SKP228-201ENST00000411042 ERBB4Q15303 1308 aa13.28□□□□□ -0.28
RN7SKP228-201ENST00000411042 PLCH1Q4KWH8 1693 aa13.28□□□□□ -0.28
RN7SKP228-201ENST00000411042 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
RN7SKP228-201ENST00000411042 BACH2Q9BYV9 841 aa13.27□□□□□ -0.29
RN7SKP228-201ENST00000411042 DISP2A7MBM2 1401 aa13.27□□□□□ -0.29
RN7SKP228-201ENST00000411042 ATP10DQ9P241 1426 aa13.27□□□□□ -0.29
RN7SKP228-201ENST00000411042 SNRPA1P09661 255 aaKnown RBP13.26□□□□□ -0.29
RN7SKP228-201ENST00000411042 CABP4P57796 275 aa13.26□□□□□ -0.29
RN7SKP228-201ENST00000411042 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
RN7SKP228-201ENST00000411042 NBR1Q14596 966 aa13.26□□□□□ -0.29
RN7SKP228-201ENST00000411042 ANKRD44Q8N8A2 993 aa13.26□□□□□ -0.29
RN7SKP228-201ENST00000411042 FMNL2Q96PY5 1086 aa13.26□□□□□ -0.29
RN7SKP228-201ENST00000411042 DDX21Q9NR30 783 aaKnown RBP eCLIP13.26□□□□□ -0.29
RN7SKP228-201ENST00000411042 BTG4Q9NY30 223 aa13.26□□□□□ -0.29
RN7SKP228-201ENST00000411042 NWD2Q9ULI1 1742 aa13.26□□□□□ -0.29
RN7SKP228-201ENST00000411042 LRP6O75581 1613 aa13.25□□□□□ -0.29
RN7SKP228-201ENST00000411042 HMMRO75330 724 aa13.25□□□□□ -0.29
RN7SKP228-201ENST00000411042 PDE4AP27815 886 aa13.25□□□□□ -0.29
RN7SKP228-201ENST00000411042 G2E3Q7L622 706 aa13.25□□□□□ -0.29
RN7SKP228-201ENST00000411042 NFATC2IPQ8NCF5 419 aa13.25□□□□□ -0.29
RN7SKP228-201ENST00000411042 DDX58O95786 925 aaKnown RBP13.24□□□□□ -0.29
RN7SKP228-201ENST00000411042 NUCB1Q02818 461 aa13.24□□□□□ -0.29
RN7SKP228-201ENST00000411042 FAM161AQ3B820 660 aa13.24□□□□□ -0.29
RN7SKP228-201ENST00000411042 TTC5Q8N0Z6 440 aa13.24□□□□□ -0.29
RN7SKP228-201ENST00000411042 DCTPP1Q9H773 170 aa13.24□□□□□ -0.29
RN7SKP228-201ENST00000411042 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
RN7SKP228-201ENST00000411042 SHANK3Q9BYB0 1731 aa13.24□□□□□ -0.29
RN7SKP228-201ENST00000411042 KCNQ3O43525 872 aa13.23□□□□□ -0.29
RN7SKP228-201ENST00000411042 ALDH1L1O75891 902 aa13.23□□□□□ -0.29
RN7SKP228-201ENST00000411042 GNAI2P04899 355 aa13.23□□□□□ -0.29
RN7SKP228-201ENST00000411042 STRN4Q9NRL3 753 aa13.23□□□□□ -0.29
RN7SKP228-201ENST00000411042 KSR2Q6VAB6 950 aa13.22□□□□□ -0.29
RN7SKP228-201ENST00000411042 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
RN7SKP228-201ENST00000411042 TEX13AQ9BXU3 409 aaPredicted RBP13.22□□□□□ -0.29
RN7SKP228-201ENST00000411042 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
RN7SKP228-201ENST00000411042 CHPF2Q9P2E5 772 aa13.22□□□□□ -0.29
RN7SKP228-201ENST00000411042 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
RN7SKP228-201ENST00000411042 TNS2Q63HR2 1409 aa13.22□□□□□ -0.29
RN7SKP228-201ENST00000411042 JCADQ9P266 1359 aa13.21□□□□□ -0.29
RN7SKP228-201ENST00000411042 PAPPAQ13219 1627 aa13.21□□□□□ -0.29
RN7SKP228-201ENST00000411042 EIF5BO60841 1220 aaKnown RBP13.21□□□□□ -0.29
RN7SKP228-201ENST00000411042 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.29
RN7SKP228-201ENST00000411042 CEP85Q6P2H3 762 aa13.21□□□□□ -0.29
RN7SKP228-201ENST00000411042 BARGINQ6ZT62 677 aa13.21□□□□□ -0.29
RN7SKP228-201ENST00000411042 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
RN7SKP228-201ENST00000411042 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.29
RN7SKP228-201ENST00000411042 SLIT2O94813 1529 aa13.21□□□□□ -0.29
RN7SKP228-201ENST00000411042 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
RN7SKP228-201ENST00000411042 SPATA31A6Q5VVP1 1343 aa13.2□□□□□ -0.3
RN7SKP228-201ENST00000411042 NRAPQ86VF7 1730 aa13.2□□□□□ -0.3
RN7SKP228-201ENST00000411042 EXOC5O00471 708 aa13.2□□□□□ -0.3
RN7SKP228-201ENST00000411042 BEND3Q5T5X7 828 aa13.2□□□□□ -0.3
RN7SKP228-201ENST00000411042 CHD1LQ86WJ1 897 aa13.2□□□□□ -0.3
RN7SKP228-201ENST00000411042 WNK3Q9BYP7 1800 aa13.2□□□□□ -0.3
RN7SKP228-201ENST00000411042 SPATA31A1Q5TZJ5 1347 aa13.19□□□□□ -0.3
RN7SKP228-201ENST00000411042 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
RN7SKP228-201ENST00000411042 PDIA6Q15084 440 aa13.19□□□□□ -0.3
RN7SKP228-201ENST00000411042 SLC4A10Q6U841 1118 aa13.19□□□□□ -0.3
RN7SKP228-201ENST00000411042 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
RN7SKP228-201ENST00000411042 LINS1Q8NG48 757 aa13.19□□□□□ -0.3
RN7SKP228-201ENST00000411042 MEIS3Q99687 375 aa13.19□□□□□ -0.3
RN7SKP228-201ENST00000411042 UTYO14607 1347 aa13.18□□□□□ -0.3
RN7SKP228-201ENST00000411042 F6X3S4 739 aa13.18□□□□□ -0.3
RN7SKP228-201ENST00000411042 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
RN7SKP228-201ENST00000411042 POTEDQ86YR6 584 aa13.18□□□□□ -0.3
RN7SKP228-201ENST00000411042 USP44Q9H0E7 712 aa13.18□□□□□ -0.3
RN7SKP228-201ENST00000411042 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
RN7SKP228-201ENST00000411042 ADCY9O60503 1353 aa13.18□□□□□ -0.3
RN7SKP228-201ENST00000411042 SPATA31A5Q5VU36 1347 aa13.17□□□□□ -0.3
RN7SKP228-201ENST00000411042 SPATA31A7Q8IWB4 1347 aa13.17□□□□□ -0.3
RN7SKP228-201ENST00000411042 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
RN7SKP228-201ENST00000411042 RGS3P49796 1198 aa13.17□□□□□ -0.3
RN7SKP228-201ENST00000411042 SLC39A6Q13433 755 aa13.17□□□□□ -0.3
RN7SKP228-201ENST00000411042 MTX1Q13505 466 aa13.17□□□□□ -0.3
RN7SKP228-201ENST00000411042 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
RN7SKP228-201ENST00000411042 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
RN7SKP228-201ENST00000411042 COL15A1P39059 1388 aa13.17□□□□□ -0.3
RN7SKP228-201ENST00000411042 GLI3P10071 1580 aa13.16□□□□□ -0.3
RN7SKP228-201ENST00000411042 RIOK3O14730 519 aaKnown RBP13.16□□□□□ -0.3
RN7SKP228-201ENST00000411042 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
RN7SKP228-201ENST00000411042 TMOD3Q9NYL9 352 aa13.16□□□□□ -0.3
RN7SKP228-201ENST00000411042 KCPQ6ZWJ8 1503 aa13.16□□□□□ -0.3
RN7SKP228-201ENST00000411042 C5P01031 1676 aa13.15□□□□□ -0.3
RN7SKP228-201ENST00000411042 NUBP1P53384 320 aa13.15□□□□□ -0.3
RN7SKP228-201ENST00000411042 NEXNQ0ZGT2 675 aa13.15□□□□□ -0.3
RN7SKP228-201ENST00000411042 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
RN7SKP228-201ENST00000411042 DDX54Q8TDD1 881 aaKnown RBP13.15□□□□□ -0.3
RN7SKP228-201ENST00000411042 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
RN7SKP228-201ENST00000411042 NECTIN2Q92692 538 aa13.15□□□□□ -0.3
RN7SKP228-201ENST00000411042 BCL9O00512 1426 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms