RNA–Protein interactions for RNA: ENST00000409937.1

CNGA3-204, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CNGA3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-204ENST00000409937 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
CNGA3-204ENST00000409937 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
CNGA3-204ENST00000409937 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.1■□□□□ 0.33
CNGA3-204ENST00000409937 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
CNGA3-204ENST00000409937 NWD1Q149M9 1564 aa17.1■□□□□ 0.33
CNGA3-204ENST00000409937 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
CNGA3-204ENST00000409937 LRSAM1Q6UWE0 723 aa17.1■□□□□ 0.33
CNGA3-204ENST00000409937 CHPF2Q9P2E5 772 aa17.1■□□□□ 0.33
CNGA3-204ENST00000409937 SPG7Q9UQ90 795 aa17.1■□□□□ 0.33
CNGA3-204ENST00000409937 TCHHQ07283 1943 aa17.1■□□□□ 0.33
CNGA3-204ENST00000409937 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
CNGA3-204ENST00000409937 CUL4AQ13619 759 aa17.09■□□□□ 0.33
CNGA3-204ENST00000409937 KCNA6P17658 529 aa17.08■□□□□ 0.33
CNGA3-204ENST00000409937 RASEFQ8IZ41 740 aa17.08■□□□□ 0.33
CNGA3-204ENST00000409937 STAP2Q9UGK3 403 aa17.08■□□□□ 0.33
CNGA3-204ENST00000409937 CWC27Q6UX04 472 aaKnown RBP17.08■□□□□ 0.32
CNGA3-204ENST00000409937 RHPN1Q8TCX5 695 aa17.08■□□□□ 0.32
CNGA3-204ENST00000409937 PI4K2BQ8TCG2 481 aa17.07■□□□□ 0.32
CNGA3-204ENST00000409937 PI4KAP2A4QPH2 592 aa17.07■□□□□ 0.32
CNGA3-204ENST00000409937 HSP90AA2PQ14568 343 aaPredicted RBP17.07■□□□□ 0.32
CNGA3-204ENST00000409937 PI4KAP1Q8N8J0 262 aa17.07■□□□□ 0.32
CNGA3-204ENST00000409937 SSH3Q8TE77 659 aa17.07■□□□□ 0.32
CNGA3-204ENST00000409937 SRCIN1Q9C0H9 1055 aa17.07■□□□□ 0.32
CNGA3-204ENST00000409937 LRRC59Q96AG4 307 aaKnown RBP17.06■□□□□ 0.32
CNGA3-204ENST00000409937 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
CNGA3-204ENST00000409937 LARGE1O95461 756 aa17.05■□□□□ 0.32
CNGA3-204ENST00000409937 PDLIM2Q96JY6 352 aa17.05■□□□□ 0.32
CNGA3-204ENST00000409937 R3HCC1Q9Y3T6 440 aaKnown RBP17.05■□□□□ 0.32
CNGA3-204ENST00000409937 MARF1Q9Y4F3 1742 aaKnown RBP17.05■□□□□ 0.32
CNGA3-204ENST00000409937 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
CNGA3-204ENST00000409937 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
CNGA3-204ENST00000409937 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
CNGA3-204ENST00000409937 CNPY2Q9Y2B0 182 aa17.05■□□□□ 0.32
CNGA3-204ENST00000409937 SNX14Q9Y5W7 946 aa17.05■□□□□ 0.32
CNGA3-204ENST00000409937 RPAP1Q9BWH6 1393 aaPredicted RBP17.05■□□□□ 0.32
CNGA3-204ENST00000409937 PRAMEF22A3QJZ6 481 aa17.04■□□□□ 0.32
CNGA3-204ENST00000409937 HSPA4P34932 840 aa17.04■□□□□ 0.32
CNGA3-204ENST00000409937 RBM10P98175 930 aaKnown RBP17.04■□□□□ 0.32
CNGA3-204ENST00000409937 OS9Q13438 667 aaPredicted RBP17.04■□□□□ 0.32
CNGA3-204ENST00000409937 MPRIPQ6WCQ1 1025 aa17.04■□□□□ 0.32
CNGA3-204ENST00000409937 MCM2P49736 904 aa17.04■□□□□ 0.32
CNGA3-204ENST00000409937 AK2P54819 239 aa17.04■□□□□ 0.32
CNGA3-204ENST00000409937 ANAPC15P60006 121 aa17.03■□□□□ 0.32
CNGA3-204ENST00000409937 HTATSF1O43719 755 aaKnown RBP17.03■□□□□ 0.32
CNGA3-204ENST00000409937 COL9A3Q14050 684 aaPredicted RBP17.03■□□□□ 0.32
CNGA3-204ENST00000409937 SGSM2O43147 1006 aa17.02■□□□□ 0.32
CNGA3-204ENST00000409937 OFD1O75665 1012 aa17.02■□□□□ 0.32
CNGA3-204ENST00000409937 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
CNGA3-204ENST00000409937 POLA2Q14181 598 aa17.02■□□□□ 0.32
CNGA3-204ENST00000409937 PROSER3Q2NL68 480 aa17.02■□□□□ 0.32
CNGA3-204ENST00000409937 MBD3O95983 291 aa17.02■□□□□ 0.32
CNGA3-204ENST00000409937 RUFY3Q7L099 469 aa17.02■□□□□ 0.32
CNGA3-204ENST00000409937 LSG1Q9H089 658 aaKnown RBP17.02■□□□□ 0.32
CNGA3-204ENST00000409937 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
CNGA3-204ENST00000409937 RAD50Q92878 1312 aa17.02■□□□□ 0.31
CNGA3-204ENST00000409937 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
CNGA3-204ENST00000409937 DNAAF4Q8WXU2 420 aa17.01■□□□□ 0.31
CNGA3-204ENST00000409937 TSPY26PQ9H489 355 aa17.01■□□□□ 0.31
CNGA3-204ENST00000409937 NOL7Q9UMY1 257 aaKnown RBP17.01■□□□□ 0.31
CNGA3-204ENST00000409937 PTH1RQ03431 593 aa17.01■□□□□ 0.31
CNGA3-204ENST00000409937 INTS4Q96HW7 963 aaKnown RBP17.01■□□□□ 0.31
CNGA3-204ENST00000409937 FIBPO43427 364 aa17■□□□□ 0.31
CNGA3-204ENST00000409937 CASTP20810 708 aaKnown RBP17■□□□□ 0.31
CNGA3-204ENST00000409937 CWF19L2Q2TBE0 894 aaKnown RBP17■□□□□ 0.31
CNGA3-204ENST00000409937 ADCK5Q3MIX3 580 aa17■□□□□ 0.31
CNGA3-204ENST00000409937 ZNF830Q96NB3 372 aaPredicted RBP17■□□□□ 0.31
CNGA3-204ENST00000409937 TBX22Q9Y458 520 aa17■□□□□ 0.31
CNGA3-204ENST00000409937 RGPD2P0DJD1 1756 aa17■□□□□ 0.31
CNGA3-204ENST00000409937 ARID3AQ99856 593 aa17■□□□□ 0.31
CNGA3-204ENST00000409937 CCDC83Q8IWF9 413 aa17■□□□□ 0.31
CNGA3-204ENST00000409937 KIF1BPQ96EK5 621 aa17■□□□□ 0.31
CNGA3-204ENST00000409937 ADCY9O60503 1353 aa16.99■□□□□ 0.31
CNGA3-204ENST00000409937 LTN1O94822 1766 aa16.99■□□□□ 0.31
CNGA3-204ENST00000409937 PTMAP06454 111 aaKnown RBP16.99■□□□□ 0.31
CNGA3-204ENST00000409937 PRPF40BQ6NWY9 871 aaKnown RBP16.99■□□□□ 0.31
CNGA3-204ENST00000409937 ZNF530Q6P9A1 599 aaPredicted RBP16.99■□□□□ 0.31
CNGA3-204ENST00000409937 CNTROBQ8N137 903 aa16.99■□□□□ 0.31
CNGA3-204ENST00000409937 TTC14Q96N46 770 aa16.99■□□□□ 0.31
CNGA3-204ENST00000409937 ZKSCAN5Q9Y2L8 839 aa16.99■□□□□ 0.31
CNGA3-204ENST00000409937 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
CNGA3-204ENST00000409937 CACNA1FO60840 1977 aa16.98■□□□□ 0.31
CNGA3-204ENST00000409937 BTBD11A6QL63 1104 aa16.98■□□□□ 0.31
CNGA3-204ENST00000409937 WDR33Q9C0J8 1336 aaKnown RBP16.98■□□□□ 0.31
CNGA3-204ENST00000409937 N4BP2Q86UW6 1770 aaPredicted RBP16.98■□□□□ 0.31
CNGA3-204ENST00000409937 RAB11FIP3O75154 756 aa16.98■□□□□ 0.31
CNGA3-204ENST00000409937 SYT1P21579 422 aa16.98■□□□□ 0.31
CNGA3-204ENST00000409937 TCEANC2Q96MN5 208 aa16.98■□□□□ 0.31
CNGA3-204ENST00000409937 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.97■□□□□ 0.31
CNGA3-204ENST00000409937 USP25Q9UHP3 1055 aa16.97■□□□□ 0.31
CNGA3-204ENST00000409937 MAP3K2Q9Y2U5 619 aa16.97■□□□□ 0.31
CNGA3-204ENST00000409937 AOX1Q06278 1338 aa16.97■□□□□ 0.31
CNGA3-204ENST00000409937 TEFQ10587 303 aa16.97■□□□□ 0.31
CNGA3-204ENST00000409937 C17orf53Q8N3J3 647 aaPredicted RBP16.97■□□□□ 0.31
CNGA3-204ENST00000409937 NECAB1Q8N987 351 aa16.97■□□□□ 0.31
CNGA3-204ENST00000409937 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
CNGA3-204ENST00000409937 DIAPH3Q9NSV4 1193 aa16.97■□□□□ 0.31
CNGA3-204ENST00000409937 RRP9O43818 475 aaKnown RBP16.96■□□□□ 0.31
CNGA3-204ENST00000409937 TPM2P07951 284 aa16.96■□□□□ 0.31
CNGA3-204ENST00000409937 HCLS1P14317 486 aaPredicted RBP16.96■□□□□ 0.31
CNGA3-204ENST00000409937 AIMP1Q12904 312 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms