RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 STK31Q9BXU1 1019 aa13.44□□□□□ -0.26
LRRTM4-204ENST00000409884 CHPF2Q9P2E5 772 aa13.44□□□□□ -0.26
LRRTM4-204ENST00000409884 ZBTB7BO15156 539 aaPredicted RBP13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 CCDC30Q5VVM6 783 aa13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 ZNF790Q6PG37 636 aa13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 CENPQQ7L2Z9 268 aaPredicted RBP13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 PARP4Q9UKK3 1724 aaKnown RBP13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 PCDH11XQ9BZA7 1347 aa13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 PCDH11YQ9BZA8 1340 aa13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 SHANK3Q9BYB0 1731 aa13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 GIGYF1O75420 1035 aaPredicted RBP13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 FLIIQ13045 1269 aa13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 PROSER3Q2NL68 480 aa13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 ZNF496Q96IT1 587 aaPredicted RBP13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
LRRTM4-204ENST00000409884 KAT6BQ8WYB5 2073 aa13.42□□□□□ -0.26
LRRTM4-204ENST00000409884 PIP4K2AP48426 406 aaPredicted RBP13.42□□□□□ -0.26
LRRTM4-204ENST00000409884 CABP4P57796 275 aa13.42□□□□□ -0.26
LRRTM4-204ENST00000409884 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
LRRTM4-204ENST00000409884 PLCH1Q4KWH8 1693 aa13.42□□□□□ -0.26
LRRTM4-204ENST00000409884 FKBP5Q13451 457 aaPredicted RBP13.41□□□□□ -0.26
LRRTM4-204ENST00000409884 ZNF830Q96NB3 372 aaPredicted RBP13.41□□□□□ -0.26
LRRTM4-204ENST00000409884 CDK11BP21127 795 aaKnown RBP13.41□□□□□ -0.26
LRRTM4-204ENST00000409884 C8orf37Q96NL8 207 aa13.41□□□□□ -0.26
LRRTM4-204ENST00000409884 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
LRRTM4-204ENST00000409884 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
LRRTM4-204ENST00000409884 CCDC9Q9Y3X0 531 aaKnown RBP13.4□□□□□ -0.26
LRRTM4-204ENST00000409884 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.27
LRRTM4-204ENST00000409884 PTPRCP08575 1304 aa13.39□□□□□ -0.27
LRRTM4-204ENST00000409884 MEIS3Q99687 375 aa13.39□□□□□ -0.27
LRRTM4-204ENST00000409884 USP16Q9Y5T5 823 aa13.39□□□□□ -0.27
LRRTM4-204ENST00000409884 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
LRRTM4-204ENST00000409884 PTCD1O75127 700 aaKnown RBP13.38□□□□□ -0.27
LRRTM4-204ENST00000409884 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
LRRTM4-204ENST00000409884 HSPA1LP34931 641 aa13.38□□□□□ -0.27
LRRTM4-204ENST00000409884 MRC1P22897 1456 aa13.38□□□□□ -0.27
LRRTM4-204ENST00000409884 C5P01031 1676 aa13.38□□□□□ -0.27
LRRTM4-204ENST00000409884 DISP2A7MBM2 1401 aa13.38□□□□□ -0.27
LRRTM4-204ENST00000409884 SIRT2Q8IXJ6 389 aa13.37□□□□□ -0.27
LRRTM4-204ENST00000409884 TMEM51Q9NW97 253 aa13.37□□□□□ -0.27
LRRTM4-204ENST00000409884 SPATA31A1Q5TZJ5 1347 aa13.37□□□□□ -0.27
LRRTM4-204ENST00000409884 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
LRRTM4-204ENST00000409884 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
LRRTM4-204ENST00000409884 NGLY1Q96IV0 654 aa13.37□□□□□ -0.27
LRRTM4-204ENST00000409884 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
LRRTM4-204ENST00000409884 NRAPQ86VF7 1730 aa13.37□□□□□ -0.27
LRRTM4-204ENST00000409884 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
LRRTM4-204ENST00000409884 MYL6BP14649 208 aa13.36□□□□□ -0.27
LRRTM4-204ENST00000409884 PDIA6Q15084 440 aa13.36□□□□□ -0.27
LRRTM4-204ENST00000409884 JCADQ9P266 1359 aa13.36□□□□□ -0.27
LRRTM4-204ENST00000409884 LRP6O75581 1613 aa13.36□□□□□ -0.27
LRRTM4-204ENST00000409884 HOXB7P09629 217 aa13.36□□□□□ -0.27
LRRTM4-204ENST00000409884 AIMP1Q12904 312 aaKnown RBP13.36□□□□□ -0.27
LRRTM4-204ENST00000409884 RWDD1Q9H446 243 aaPredicted RBP13.36□□□□□ -0.27
LRRTM4-204ENST00000409884 PI4KAP2A4QPH2 592 aa13.35□□□□□ -0.27
LRRTM4-204ENST00000409884 CNPY4Q8N129 248 aa13.35□□□□□ -0.27
LRRTM4-204ENST00000409884 PI4KAP1Q8N8J0 262 aa13.35□□□□□ -0.27
LRRTM4-204ENST00000409884 SLIT2O94813 1529 aa13.35□□□□□ -0.27
LRRTM4-204ENST00000409884 EXOC5O00471 708 aa13.35□□□□□ -0.27
LRRTM4-204ENST00000409884 SMAP1Q8IYB5 467 aaPredicted RBP13.35□□□□□ -0.27
LRRTM4-204ENST00000409884 PIGBQ92521 554 aa13.35□□□□□ -0.27
LRRTM4-204ENST00000409884 DBF4Q9UBU7 674 aaPredicted RBP13.35□□□□□ -0.27
LRRTM4-204ENST00000409884 ASAP1Q9ULH1 1129 aa13.35□□□□□ -0.27
LRRTM4-204ENST00000409884 PDZRN3Q9UPQ7 1066 aa13.35□□□□□ -0.27
LRRTM4-204ENST00000409884 SOS1Q07889 1333 aaPredicted RBP13.34□□□□□ -0.27
LRRTM4-204ENST00000409884 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
LRRTM4-204ENST00000409884 ERVV-2B6SEH9 535 aa13.34□□□□□ -0.27
LRRTM4-204ENST00000409884 SYTL4Q96C24 671 aaPredicted RBP13.34□□□□□ -0.27
LRRTM4-204ENST00000409884 CACNA1FO60840 1977 aa13.34□□□□□ -0.27
LRRTM4-204ENST00000409884 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
LRRTM4-204ENST00000409884 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
LRRTM4-204ENST00000409884 A0A0G2JS52 829 aa13.33□□□□□ -0.27
LRRTM4-204ENST00000409884 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.27
LRRTM4-204ENST00000409884 FMNL2Q96PY5 1086 aa13.33□□□□□ -0.27
LRRTM4-204ENST00000409884 ADCY9O60503 1353 aa13.33□□□□□ -0.28
LRRTM4-204ENST00000409884 BCL9LQ86UU0 1499 aa13.33□□□□□ -0.28
LRRTM4-204ENST00000409884 SNRPA1P09661 255 aaKnown RBP13.33□□□□□ -0.28
LRRTM4-204ENST00000409884 CLCN1P35523 988 aa13.33□□□□□ -0.28
LRRTM4-204ENST00000409884 HDAC1Q13547 482 aaPredicted RBP13.33□□□□□ -0.28
LRRTM4-204ENST00000409884 GLI3P10071 1580 aa13.33□□□□□ -0.28
LRRTM4-204ENST00000409884 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
LRRTM4-204ENST00000409884 DDB1Q16531 1140 aa13.32□□□□□ -0.28
LRRTM4-204ENST00000409884 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
LRRTM4-204ENST00000409884 ACSBG1Q96GR2 724 aa13.32□□□□□ -0.28
LRRTM4-204ENST00000409884 DDRGK1Q96HY6 314 aa13.32□□□□□ -0.28
LRRTM4-204ENST00000409884 CCT4P50991 539 aaKnown RBP13.31□□□□□ -0.28
LRRTM4-204ENST00000409884 MARCH10Q8NA82 808 aaPredicted RBP13.31□□□□□ -0.28
LRRTM4-204ENST00000409884 DDX21Q9NR30 783 aaKnown RBP eCLIP13.31□□□□□ -0.28
LRRTM4-204ENST00000409884 MAP3K2Q9Y2U5 619 aa13.31□□□□□ -0.28
LRRTM4-204ENST00000409884 ATP10DQ9P241 1426 aa13.31□□□□□ -0.28
LRRTM4-204ENST00000409884 WNK3Q9BYP7 1800 aa13.31□□□□□ -0.28
LRRTM4-204ENST00000409884 A1BGP04217 495 aa13.31□□□□□ -0.28
LRRTM4-204ENST00000409884 PRIM1P49642 420 aaKnown RBP13.31□□□□□ -0.28
LRRTM4-204ENST00000409884 USP44Q9H0E7 712 aa13.31□□□□□ -0.28
LRRTM4-204ENST00000409884 KCPQ6ZWJ8 1503 aa13.3□□□□□ -0.28
LRRTM4-204ENST00000409884 CWF19L2Q2TBE0 894 aaKnown RBP13.3□□□□□ -0.28
LRRTM4-204ENST00000409884 LRP10Q7Z4F1 713 aa13.3□□□□□ -0.28
LRRTM4-204ENST00000409884 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
LRRTM4-204ENST00000409884 DNAAF4Q8WXU2 420 aa13.3□□□□□ -0.28
LRRTM4-204ENST00000409884 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms