RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 VSIG10Q8N0Z9 540 aa21.44■■□□□ 1.02
GCFC2-202ENST00000409857 MYH16Q9H6N6 1097 aa21.44■■□□□ 1.02
GCFC2-202ENST00000409857 HEG1Q9ULI3 1381 aa21.44■■□□□ 1.02
GCFC2-202ENST00000409857 E9PSI1 815 aa21.44■■□□□ 1.02
GCFC2-202ENST00000409857 FAM161AQ3B820 660 aa21.44■■□□□ 1.02
GCFC2-202ENST00000409857 FMNL2Q96PY5 1086 aa21.44■■□□□ 1.02
GCFC2-202ENST00000409857 COL5A3P25940 1745 aaPredicted RBP21.43■■□□□ 1.02
GCFC2-202ENST00000409857 LAMB4A4D0S4 1761 aa21.43■■□□□ 1.02
GCFC2-202ENST00000409857 KCNQ3O43525 872 aa21.43■■□□□ 1.02
GCFC2-202ENST00000409857 BCAR3O75815 825 aa21.43■■□□□ 1.02
GCFC2-202ENST00000409857 SLC27A3Q5K4L6 730 aa21.43■■□□□ 1.02
GCFC2-202ENST00000409857 C5P01031 1676 aa21.43■■□□□ 1.02
GCFC2-202ENST00000409857 HMGB2P26583 209 aaKnown RBP21.43■■□□□ 1.02
GCFC2-202ENST00000409857 EIF4A1P60842 406 aaKnown RBP21.43■■□□□ 1.02
GCFC2-202ENST00000409857 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.43■■□□□ 1.02
GCFC2-202ENST00000409857 LOC102724428A0A0B4J2F2 783 aa21.42■■□□□ 1.02
GCFC2-202ENST00000409857 SIK1P57059 783 aa21.42■■□□□ 1.02
GCFC2-202ENST00000409857 CAMKK2Q96RR4 588 aa21.42■■□□□ 1.02
GCFC2-202ENST00000409857 NFKBIBQ15653 356 aa21.42■■□□□ 1.02
GCFC2-202ENST00000409857 ZNF496Q96IT1 587 aaPredicted RBP21.42■■□□□ 1.02
GCFC2-202ENST00000409857 TRMT2AQ8IZ69 625 aaKnown RBP21.4■■□□□ 1.02
GCFC2-202ENST00000409857 NUP188Q5SRE5 1749 aa21.4■■□□□ 1.02
GCFC2-202ENST00000409857 PTCD1O75127 700 aaKnown RBP21.39■■□□□ 1.02
GCFC2-202ENST00000409857 TXNRD1Q16881 649 aa21.39■■□□□ 1.02
GCFC2-202ENST00000409857 RBM42Q9BTD8 480 aaKnown RBP21.39■■□□□ 1.02
GCFC2-202ENST00000409857 SLC4A9Q96Q91 983 aa21.39■■□□□ 1.01
GCFC2-202ENST00000409857 EN1Q05925 392 aaPredicted RBP21.38■■□□□ 1.01
GCFC2-202ENST00000409857 PROM2Q8N271 834 aa21.38■■□□□ 1.01
GCFC2-202ENST00000409857 CCNL1Q9UK58 526 aaPredicted RBP21.38■■□□□ 1.01
GCFC2-202ENST00000409857 SOS1Q07889 1333 aaPredicted RBP21.38■■□□□ 1.01
GCFC2-202ENST00000409857 TSR2Q969E8 191 aaKnown RBP21.38■■□□□ 1.01
GCFC2-202ENST00000409857 TEX13AQ9BXU3 409 aaPredicted RBP21.38■■□□□ 1.01
GCFC2-202ENST00000409857 DAXXQ9UER7 740 aaPredicted RBP21.38■■□□□ 1.01
GCFC2-202ENST00000409857 SNRPA1P09661 255 aaKnown RBP21.37■■□□□ 1.01
GCFC2-202ENST00000409857 HOXB7P09629 217 aa21.37■■□□□ 1.01
GCFC2-202ENST00000409857 ATP6V1AP38606 617 aa21.37■■□□□ 1.01
GCFC2-202ENST00000409857 DEFB132Q7Z7B7 95 aa21.37■■□□□ 1.01
GCFC2-202ENST00000409857 GIGYF1O75420 1035 aaPredicted RBP21.36■■□□□ 1.01
GCFC2-202ENST00000409857 EZH2Q15910 746 aaKnown RBP21.36■■□□□ 1.01
GCFC2-202ENST00000409857 C4BP0C0L5 1744 aa21.36■■□□□ 1.01
GCFC2-202ENST00000409857 ANO8Q9HCE9 1232 aaPredicted RBP21.35■■□□□ 1.01
GCFC2-202ENST00000409857 LRRC4BQ9NT99 713 aa21.35■■□□□ 1.01
GCFC2-202ENST00000409857 ITPK1Q13572 414 aa21.34■■□□□ 1.01
GCFC2-202ENST00000409857 IGHDP01880 384 aa21.34■■□□□ 1.01
GCFC2-202ENST00000409857 GSE1Q14687 1217 aa21.33■■□□□ 1
GCFC2-202ENST00000409857 DNAJC10Q8IXB1 793 aa21.32■■□□□ 1
GCFC2-202ENST00000409857 MYH14Q7Z406 1995 aaKnown RBP21.32■■□□□ 1
GCFC2-202ENST00000409857 QSER1Q2KHR3 1735 aa21.31■■□□□ 1
GCFC2-202ENST00000409857 STARD3NLO95772 234 aa21.31■■□□□ 1
GCFC2-202ENST00000409857 C8orf58Q8NAV2 365 aa21.31■■□□□ 1
GCFC2-202ENST00000409857 CNTNAP4Q9C0A0 1308 aa21.31■■□□□ 1
GCFC2-202ENST00000409857 SOCS7O14512 581 aa21.31■■□□□ 1
GCFC2-202ENST00000409857 EXOSC9Q06265 439 aaKnown RBP21.31■■□□□ 1
GCFC2-202ENST00000409857 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
GCFC2-202ENST00000409857 CYP19A1P11511 503 aaPredicted RBP21.3■■□□□ 1
GCFC2-202ENST00000409857 KRT24Q2M2I5 525 aa21.3■■□□□ 1
GCFC2-202ENST00000409857 RC3H1Q5TC82 1133 aaKnown RBP21.3■■□□□ 1
GCFC2-202ENST00000409857 LINC00116Q8NCU8 138 aa21.3■■□□□ 1
GCFC2-202ENST00000409857 CACNA1FO60840 1977 aa21.3■■□□□ 1
GCFC2-202ENST00000409857 PRAMEF22A3QJZ6 481 aa21.29■■□□□ 1
GCFC2-202ENST00000409857 KCNQ4P56696 695 aa21.29■■□□□ 1
GCFC2-202ENST00000409857 BRPF3Q9ULD4 1205 aa21.29■■□□□ 1
GCFC2-202ENST00000409857 UBR3Q6ZT12 1888 aa21.29■■□□□ 1
GCFC2-202ENST00000409857 TWISTNBQ3B726 338 aaPredicted RBP21.29■■□□□ 1
GCFC2-202ENST00000409857 FRAT1Q92837 279 aaPredicted RBP21.29■■□□□ 1
GCFC2-202ENST00000409857 USP16Q9Y5T5 823 aa21.29■■□□□ 1
GCFC2-202ENST00000409857 CT47B1P0C2W7 299 aaPredicted RBP21.28■■□□□ 1
GCFC2-202ENST00000409857 ERBB4Q15303 1308 aa21.28■■□□□ 1
GCFC2-202ENST00000409857 TSPYL6Q8N831 410 aa21.28■■□□□ 1
GCFC2-202ENST00000409857 PANK1Q8TE04 598 aa21.27■■□□□ 1
GCFC2-202ENST00000409857 TUBGCP6Q96RT7 1819 aa21.27■■□□□ 1
GCFC2-202ENST00000409857 VAMP4O75379 141 aa21.26■□□□□ 0.99
GCFC2-202ENST00000409857 FRAT2O75474 233 aaPredicted RBP21.26■□□□□ 0.99
GCFC2-202ENST00000409857 CRKLP46109 303 aaKnown RBP21.26■□□□□ 0.99
GCFC2-202ENST00000409857 AKT1S1Q96B36 256 aa21.26■□□□□ 0.99
GCFC2-202ENST00000409857 ZNF428Q96B54 188 aa21.26■□□□□ 0.99
GCFC2-202ENST00000409857 CCDC87Q9NVE4 849 aa21.26■□□□□ 0.99
GCFC2-202ENST00000409857 COG6Q9Y2V7 657 aa21.26■□□□□ 0.99
GCFC2-202ENST00000409857 INTS5Q6P9B9 1019 aaKnown RBP21.25■□□□□ 0.99
GCFC2-202ENST00000409857 ELL2O00472 640 aaPredicted RBP21.24■□□□□ 0.99
GCFC2-202ENST00000409857 HDGFL1Q5TGJ6 251 aa21.24■□□□□ 0.99
GCFC2-202ENST00000409857 SEC24BO95487 1268 aa21.24■□□□□ 0.99
GCFC2-202ENST00000409857 CCDC30Q5VVM6 783 aa21.23■□□□□ 0.99
GCFC2-202ENST00000409857 CANXP27824 592 aaKnown RBP21.23■□□□□ 0.99
GCFC2-202ENST00000409857 NBPF14Q5TI25 921 aa21.23■□□□□ 0.99
GCFC2-202ENST00000409857 AK7Q96M32 723 aa21.23■□□□□ 0.99
GCFC2-202ENST00000409857 EIF2S2P20042 333 aaKnown RBP21.22■□□□□ 0.99
GCFC2-202ENST00000409857 A1BGP04217 495 aa21.22■□□□□ 0.99
GCFC2-202ENST00000409857 STK32BQ9NY57 414 aa21.22■□□□□ 0.99
GCFC2-202ENST00000409857 RPS6KA4O75676 772 aa21.21■□□□□ 0.99
GCFC2-202ENST00000409857 IL6STP40189 918 aaPredicted RBP21.21■□□□□ 0.99
GCFC2-202ENST00000409857 ZNF827Q17R98 1081 aa21.21■□□□□ 0.99
GCFC2-202ENST00000409857 ZBTB1Q9Y2K1 713 aa21.21■□□□□ 0.99
GCFC2-202ENST00000409857 SLC15A2Q16348 729 aa21.21■□□□□ 0.99
GCFC2-202ENST00000409857 CLUAP1Q96AJ1 413 aa21.21■□□□□ 0.99
GCFC2-202ENST00000409857 DBF4Q9UBU7 674 aaPredicted RBP21.21■□□□□ 0.99
GCFC2-202ENST00000409857 C4AP0C0L4 1744 aa21.2■□□□□ 0.98
GCFC2-202ENST00000409857 PDE3AQ14432 1141 aa21.2■□□□□ 0.98
GCFC2-202ENST00000409857 PDIA6Q15084 440 aa21.2■□□□□ 0.98
GCFC2-202ENST00000409857 DDX21Q9NR30 783 aaKnown RBP eCLIP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms