RNA–Protein interactions for RNA: ENST00000409643.5

PSMD1-203, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 5 BASIC

Gene PSMD1, Length 2,901 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-203ENST00000409643 PPP1R42Q7Z4L9 355 aa13.57□□□□□ -0.24
PSMD1-203ENST00000409643 GRPEL1Q9HAV7 217 aa13.57□□□□□ -0.24
PSMD1-203ENST00000409643 RTN4Q9NQC3 1192 aaKnown RBP13.57□□□□□ -0.24
PSMD1-203ENST00000409643 CHPF2Q9P2E5 772 aa13.57□□□□□ -0.24
PSMD1-203ENST00000409643 SIPA1L3O60292 1781 aaPredicted RBP13.57□□□□□ -0.24
PSMD1-203ENST00000409643 EIF2S2P20042 333 aaKnown RBP13.57□□□□□ -0.24
PSMD1-203ENST00000409643 MTX1Q13505 466 aa13.57□□□□□ -0.24
PSMD1-203ENST00000409643 HEG1Q9ULI3 1381 aa13.57□□□□□ -0.24
PSMD1-203ENST00000409643 AK9Q5TCS8 1911 aa13.57□□□□□ -0.24
PSMD1-203ENST00000409643 RHPN1Q8TCX5 695 aa13.57□□□□□ -0.24
PSMD1-203ENST00000409643 SURF6O75683 361 aaKnown RBP13.56□□□□□ -0.24
PSMD1-203ENST00000409643 RILPL2Q969X0 211 aa13.56□□□□□ -0.24
PSMD1-203ENST00000409643 ABCC6O95255 1503 aa13.56□□□□□ -0.24
PSMD1-203ENST00000409643 PI4KAP2A4QPH2 592 aa13.56□□□□□ -0.24
PSMD1-203ENST00000409643 PI4KAP1Q8N8J0 262 aa13.56□□□□□ -0.24
PSMD1-203ENST00000409643 USP42Q9H9J4 1324 aaKnown RBP13.55□□□□□ -0.24
PSMD1-203ENST00000409643 SRGAP3O43295 1099 aa13.55□□□□□ -0.24
PSMD1-203ENST00000409643 ANKRD24Q8TF21 1146 aa13.55□□□□□ -0.24
PSMD1-203ENST00000409643 INTS4Q96HW7 963 aaKnown RBP13.55□□□□□ -0.24
PSMD1-203ENST00000409643 ADCY9O60503 1353 aa13.55□□□□□ -0.24
PSMD1-203ENST00000409643 TTC41PQ6P2S7 1318 aa13.55□□□□□ -0.24
PSMD1-203ENST00000409643 LRRC59Q96AG4 307 aaKnown RBP13.55□□□□□ -0.24
PSMD1-203ENST00000409643 CRYBG1Q9Y4K1 1723 aa13.54□□□□□ -0.24
PSMD1-203ENST00000409643 NEK4P51957 841 aa13.54□□□□□ -0.24
PSMD1-203ENST00000409643 ANO2Q9NQ90 1003 aa13.54□□□□□ -0.24
PSMD1-203ENST00000409643 PXDNQ92626 1479 aa13.54□□□□□ -0.24
PSMD1-203ENST00000409643 CUL4AQ13619 759 aa13.54□□□□□ -0.24
PSMD1-203ENST00000409643 MPRIPQ6WCQ1 1025 aa13.54□□□□□ -0.24
PSMD1-203ENST00000409643 CNTROBQ8N137 903 aa13.54□□□□□ -0.24
PSMD1-203ENST00000409643 HYPKQ9NX55 129 aa13.54□□□□□ -0.24
PSMD1-203ENST00000409643 ZBTB7CA1YPR0 619 aa13.53□□□□□ -0.24
PSMD1-203ENST00000409643 GIGYF1O75420 1035 aaPredicted RBP13.53□□□□□ -0.24
PSMD1-203ENST00000409643 ERC1Q8IUD2 1116 aa13.53□□□□□ -0.24
PSMD1-203ENST00000409643 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
PSMD1-203ENST00000409643 NBPF7P0C2Y1 421 aaPredicted RBP13.53□□□□□ -0.24
PSMD1-203ENST00000409643 TSHZ3Q63HK5 1081 aa13.53□□□□□ -0.24
PSMD1-203ENST00000409643 KSR2Q6VAB6 950 aa13.53□□□□□ -0.24
PSMD1-203ENST00000409643 ORAI2Q96SN7 254 aa13.53□□□□□ -0.24
PSMD1-203ENST00000409643 ALS2Q96Q42 1657 aa13.53□□□□□ -0.24
PSMD1-203ENST00000409643 C1orf167Q5SNV9 1468 aa13.53□□□□□ -0.24
PSMD1-203ENST00000409643 PI4K2BQ8TCG2 481 aa13.53□□□□□ -0.24
PSMD1-203ENST00000409643 IL1RAPL2Q9NP60 686 aa13.53□□□□□ -0.24
PSMD1-203ENST00000409643 DDX58O95786 925 aaKnown RBP13.52□□□□□ -0.24
PSMD1-203ENST00000409643 KRT28Q7Z3Y7 464 aa13.52□□□□□ -0.24
PSMD1-203ENST00000409643 TMX3Q96JJ7 454 aa13.52□□□□□ -0.24
PSMD1-203ENST00000409643 KCNQ3O43525 872 aa13.52□□□□□ -0.25
PSMD1-203ENST00000409643 HSPA4P34932 840 aa13.52□□□□□ -0.25
PSMD1-203ENST00000409643 RBM33Q96EV2 1170 aaKnown RBP13.52□□□□□ -0.25
PSMD1-203ENST00000409643 GLRX3O76003 335 aaKnown RBP13.51□□□□□ -0.25
PSMD1-203ENST00000409643 MCTP1Q6DN14 999 aa13.51□□□□□ -0.25
PSMD1-203ENST00000409643 GPATCH3Q96I76 525 aa13.51□□□□□ -0.25
PSMD1-203ENST00000409643 C19orf44Q9H6X5 657 aa13.51□□□□□ -0.25
PSMD1-203ENST00000409643 RAD50Q92878 1312 aa13.51□□□□□ -0.25
PSMD1-203ENST00000409643 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 CLASRPQ8N2M8 674 aaKnown RBP13.5□□□□□ -0.25
PSMD1-203ENST00000409643 ZGPATQ8N5A5 531 aaKnown RBP13.5□□□□□ -0.25
PSMD1-203ENST00000409643 C9orf78Q9NZ63 289 aaPredicted RBP13.5□□□□□ -0.25
PSMD1-203ENST00000409643 DCCP43146 1447 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 UTYO14607 1347 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 ERBB3P21860 1342 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 SGSM2O43147 1006 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 ZNF445P59923 1031 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 UNC5CLQ8IV45 518 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 LINS1Q8NG48 757 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 DDX21Q9NR30 783 aaKnown RBP eCLIP13.5□□□□□ -0.25
PSMD1-203ENST00000409643 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■■■□□ 17.3
PSMD1-203ENST00000409643 MAP3K2Q9Y2U5 619 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 PROSER2Q86WR7 435 aaPredicted RBP13.5□□□□□ -0.25
PSMD1-203ENST00000409643 RUFY2Q8WXA3 655 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 PANK2Q9BZ23 570 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 SCN11AQ9UI33 1791 aa13.5□□□□□ -0.25
PSMD1-203ENST00000409643 OS9Q13438 667 aaPredicted RBP13.49□□□□□ -0.25
PSMD1-203ENST00000409643 ARXQ96QS3 562 aa13.49□□□□□ -0.25
PSMD1-203ENST00000409643 PALD1Q9ULE6 856 aa13.49□□□□□ -0.25
PSMD1-203ENST00000409643 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
PSMD1-203ENST00000409643 RGPD5Q99666 1765 aa13.48□□□□□ -0.25
PSMD1-203ENST00000409643 KIAA1211Q6ZU35 1233 aa13.48□□□□□ -0.25
PSMD1-203ENST00000409643 RAPGEF4Q8WZA2 1011 aa13.48□□□□□ -0.25
PSMD1-203ENST00000409643 ZDHHC9Q9Y397 364 aa13.48□□□□□ -0.25
PSMD1-203ENST00000409643 BRD1O95696 1058 aa13.47□□□□□ -0.25
PSMD1-203ENST00000409643 GAS2L3Q86XJ1 694 aa13.47□□□□□ -0.25
PSMD1-203ENST00000409643 MBD3O95983 291 aa13.47□□□□□ -0.25
PSMD1-203ENST00000409643 PKP1Q13835 747 aa13.47□□□□□ -0.25
PSMD1-203ENST00000409643 ANP32BQ92688 251 aaKnown RBP13.47□□□□□ -0.25
PSMD1-203ENST00000409643 ECHDC1Q9NTX5 307 aa13.47□□□□□ -0.25
PSMD1-203ENST00000409643 SPG7Q9UQ90 795 aa13.47□□□□□ -0.25
PSMD1-203ENST00000409643 GRM8O00222 908 aa13.46□□□□□ -0.25
PSMD1-203ENST00000409643 PLEKHG5O94827 1062 aa13.46□□□□□ -0.25
PSMD1-203ENST00000409643 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.25
PSMD1-203ENST00000409643 AXIN2Q9Y2T1 843 aa13.46□□□□□ -0.25
PSMD1-203ENST00000409643 ANXA1P04083 346 aa13.46□□□□□ -0.25
PSMD1-203ENST00000409643 HIP1O00291 1037 aa13.46□□□□□ -0.26
PSMD1-203ENST00000409643 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.26
PSMD1-203ENST00000409643 CCDC173Q0VFZ6 552 aa13.46□□□□□ -0.26
PSMD1-203ENST00000409643 LARP1Q6PKG0 1096 aaKnown RBP13.46□□□□□ -0.26
PSMD1-203ENST00000409643 LSG1Q9H089 658 aaKnown RBP13.46□□□□□ -0.26
PSMD1-203ENST00000409643 NPHP3Q7Z494 1330 aa13.46□□□□□ -0.26
PSMD1-203ENST00000409643 MRC1P22897 1456 aa13.46□□□□□ -0.26
PSMD1-203ENST00000409643 IFIT2P09913 472 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms