RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 CHD4Q14839 1912 aa6.35□□□□□ -1.39
R3HDM1-203ENST00000409606 TATP17735 454 aaPredicted RBP6.35□□□□□ -1.39
R3HDM1-203ENST00000409606 ZC3H6P61129 1189 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-203ENST00000409606 CHRNA2Q15822 529 aa6.34□□□□□ -1.39
R3HDM1-203ENST00000409606 RC3H1Q5TC82 1133 aaKnown RBP6.34□□□□□ -1.39
R3HDM1-203ENST00000409606 ATG3Q9NT62 314 aa6.34□□□□□ -1.39
R3HDM1-203ENST00000409606 C1QTNF8P60827 252 aa6.34□□□□□ -1.39
R3HDM1-203ENST00000409606 ZNF790Q6PG37 636 aa6.34□□□□□ -1.39
R3HDM1-203ENST00000409606 FAM196AQ6ZSG2 479 aa6.34□□□□□ -1.39
R3HDM1-203ENST00000409606 TSPYL6Q8N831 410 aa6.34□□□□□ -1.39
R3HDM1-203ENST00000409606 BCL11AQ9H165 835 aa6.34□□□□□ -1.39
R3HDM1-203ENST00000409606 MAPK8IP3Q9UPT6 1336 aa6.34□□□□□ -1.4
R3HDM1-203ENST00000409606 MTX1Q13505 466 aa6.34□□□□□ -1.4
R3HDM1-203ENST00000409606 TNNT2P45379 298 aaPredicted RBP6.33□□□□□ -1.4
R3HDM1-203ENST00000409606 ZNF609O15014 1411 aa6.33□□□□□ -1.4
R3HDM1-203ENST00000409606 TRIM28Q13263 835 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-203ENST00000409606 USHBP1Q8N6Y0 703 aa6.33□□□□□ -1.4
R3HDM1-203ENST00000409606 RCAN3Q9UKA8 241 aa6.33□□□□□ -1.4
R3HDM1-203ENST00000409606 KCNQ2O43526 872 aa6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 SEPT12Q8IYM1 358 aa6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 TIAM2Q8IVF5 1701 aa6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 SALL3Q9BXA9 1300 aa6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 CACNA1SQ13698 1873 aa6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 MCM10Q7L590 875 aa6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 SSH1Q8WYL5 1049 aa6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 PIGBQ92521 554 aa6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 SENP3-EIF4A1A0A087X0R7 540 aa6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 PLSCR1O15162 318 aa6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 EXOSC9Q06265 439 aaKnown RBP6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 INTS5Q6P9B9 1019 aaKnown RBP6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 PPP1R1BQ9UD71 204 aaPredicted RBP6.32□□□□□ -1.4
R3HDM1-203ENST00000409606 ZNF530Q6P9A1 599 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 POLR3GLQ9BT43 218 aa6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 PLA2G12BQ9BX93 195 aa6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 ZBTB40Q9NUA8 1239 aa6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 ZBTB7BO15156 539 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 CYP19A1P11511 503 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 BCL11BQ9C0K0 894 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 MYO5AQ9Y4I1 1855 aaKnown RBP6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 GREB1LQ9C091 1923 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 NBPF26B4DH59 902 aa6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 NBPF10Q6P3W6 841 aaKnown RBP6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 NBPF15Q8N660 670 aa6.31□□□□□ -1.4
R3HDM1-203ENST00000409606 U2SURPO15042 1029 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 HDAC1Q13547 482 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 SBF1O95248 1867 aa6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 KCNQ3O43525 872 aa6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 ADAMTS2O95450 1211 aa6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 RLBP1P12271 317 aa6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 TRIM27P14373 513 aa6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 HAP1P54257 671 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 AKT1S1Q96B36 256 aa6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 DDX21Q9NR30 783 aaKnown RBP eCLIP6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 RABL6Q3YEC7 729 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 RAPGEF4Q8WZA2 1011 aa6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 TSR2Q969E8 191 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 USP42Q9H9J4 1324 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-203ENST00000409606 POLA2Q14181 598 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 DCTN1Q14203 1278 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 TWISTNBQ3B726 338 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 ATF7IPQ6VMQ6 1270 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 CHMP4AQ9BY43 222 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 CDHR2Q9BYE9 1310 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 IRS2Q9Y4H2 1338 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 PALLDQ8WX93 1383 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 CCDC88AQ3V6T2 1871 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 LOC285556D6RIA3 1793 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 KLRG2A4D1S0 409 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 ERVV-1B6SEH8 477 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 EIF5P55010 431 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 BEND3Q5T5X7 828 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 IL17RAQ96F46 866 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 THUMPD2Q9BTF0 503 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 ISCA1Q9BUE6 129 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 PLEKHG5O94827 1062 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 RRP7AQ9Y3A4 280 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 ADAMTSL1Q8N6G6 1762 aa6.29□□□□□ -1.4
R3HDM1-203ENST00000409606 MVPQ14764 893 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 TOM1L2Q6ZVM7 507 aa6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 CAMKK2Q96RR4 588 aa6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 TEX13AQ9BXU3 409 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 BCAR3O75815 825 aa6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 ADRA2BP18089 450 aa6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 SLC27A3Q5K4L6 730 aa6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 KAZALD1Q96I82 304 aa6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 ZNF496Q96IT1 587 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 SIPA1L1O43166 1804 aa6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 PROM2Q8N271 834 aa6.28□□□□□ -1.4
R3HDM1-203ENST00000409606 C10orf71Q711Q0 1435 aa6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 BTBD11A6QL63 1104 aa6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 CENPBP07199 599 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 SNRPA1P09661 255 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 C20orf194Q5TEA3 1177 aa6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 MPRIPQ6WCQ1 1025 aa6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 SIRT2Q8IXJ6 389 aa6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 NFATC2IPQ8NCF5 419 aa6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 AK7Q96M32 723 aa6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 IL6STP40189 918 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 ITPK1Q13572 414 aa6.27□□□□□ -1.41
R3HDM1-203ENST00000409606 ZNF34Q8IZ26 560 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms