RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 RBSNQ9H1K0 784 aa13.02□□□□□ -0.33
NIF3L1-204ENST00000409357 ANKRD36BQ8N2N9 1353 aa13.02□□□□□ -0.33
NIF3L1-204ENST00000409357 CRB1P82279 1406 aa13.02□□□□□ -0.33
NIF3L1-204ENST00000409357 LRRC37A3O60309 1634 aa13.01□□□□□ -0.33
NIF3L1-204ENST00000409357 TNS1Q9HBL0 1735 aaKnown RBP13.01□□□□□ -0.33
NIF3L1-204ENST00000409357 CCDC27Q2M243 656 aa13.01□□□□□ -0.33
NIF3L1-204ENST00000409357 LRSAM1Q6UWE0 723 aa13.01□□□□□ -0.33
NIF3L1-204ENST00000409357 ZNF710Q8N1W2 664 aa13.01□□□□□ -0.33
NIF3L1-204ENST00000409357 KCNH5Q8NCM2 988 aa13.01□□□□□ -0.33
NIF3L1-204ENST00000409357 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
NIF3L1-204ENST00000409357 KIF20BQ96Q89 1820 aa13.01□□□□□ -0.33
NIF3L1-204ENST00000409357 APAF1O14727 1248 aa13□□□□□ -0.33
NIF3L1-204ENST00000409357 FBLN1P23142 703 aa13□□□□□ -0.33
NIF3L1-204ENST00000409357 MVPQ14764 893 aaKnown RBP13□□□□□ -0.33
NIF3L1-204ENST00000409357 UVSSAQ2YD98 709 aa13□□□□□ -0.33
NIF3L1-204ENST00000409357 CREBRFQ8IUR6 639 aa13□□□□□ -0.33
NIF3L1-204ENST00000409357 TCP11L2Q8N4U5 519 aa13□□□□□ -0.33
NIF3L1-204ENST00000409357 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
NIF3L1-204ENST00000409357 KIF2CQ99661 725 aa13□□□□□ -0.33
NIF3L1-204ENST00000409357 CWC22Q9HCG8 908 aaKnown RBP13□□□□□ -0.33
NIF3L1-204ENST00000409357 LMBRD1Q9NUN5 540 aa13□□□□□ -0.33
NIF3L1-204ENST00000409357 SPTLC3Q9NUV7 552 aa13□□□□□ -0.33
NIF3L1-204ENST00000409357 BARGINQ6ZT62 677 aa12.99□□□□□ -0.33
NIF3L1-204ENST00000409357 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
NIF3L1-204ENST00000409357 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
NIF3L1-204ENST00000409357 KIF3AQ9Y496 699 aa12.99□□□□□ -0.33
NIF3L1-204ENST00000409357 ABCC6O95255 1503 aa12.99□□□□□ -0.33
NIF3L1-204ENST00000409357 WDR17Q8IZU2 1322 aa12.99□□□□□ -0.33
NIF3L1-204ENST00000409357 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
NIF3L1-204ENST00000409357 PDCL2Q8N4E4 241 aa12.99□□□□□ -0.33
NIF3L1-204ENST00000409357 ANKRD7Q92527 254 aa12.99□□□□□ -0.33
NIF3L1-204ENST00000409357 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
NIF3L1-204ENST00000409357 BMP2KLQ5H9B9 411 aa12.98□□□□□ -0.33
NIF3L1-204ENST00000409357 TOM1L2Q6ZVM7 507 aa12.98□□□□□ -0.33
NIF3L1-204ENST00000409357 CAPN15O75808 1086 aa12.97□□□□□ -0.33
NIF3L1-204ENST00000409357 CARD14Q9BXL6 1004 aa12.97□□□□□ -0.33
NIF3L1-204ENST00000409357 OGFRQ9NZT2 677 aa12.97□□□□□ -0.33
NIF3L1-204ENST00000409357 PEAK1Q9H792 1746 aa12.97□□□□□ -0.33
NIF3L1-204ENST00000409357 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.33
NIF3L1-204ENST00000409357 MBD3O95983 291 aa12.96□□□□□ -0.33
NIF3L1-204ENST00000409357 SSFA2P28290 1259 aa12.96□□□□□ -0.33
NIF3L1-204ENST00000409357 FAM184AQ8NB25 1140 aa12.96□□□□□ -0.33
NIF3L1-204ENST00000409357 FYB1O15117 783 aa12.96□□□□□ -0.34
NIF3L1-204ENST00000409357 PRIM1P49642 420 aaKnown RBP12.96□□□□□ -0.34
NIF3L1-204ENST00000409357 FKBP5Q13451 457 aaPredicted RBP12.96□□□□□ -0.34
NIF3L1-204ENST00000409357 GGNBP2Q9H3C7 697 aa12.96□□□□□ -0.34
NIF3L1-204ENST00000409357 DIAPH3Q9NSV4 1193 aa12.96□□□□□ -0.34
NIF3L1-204ENST00000409357 NSD3Q9BZ95 1437 aa12.95□□□□□ -0.34
NIF3L1-204ENST00000409357 ERBB3P21860 1342 aa12.95□□□□□ -0.34
NIF3L1-204ENST00000409357 CCDC66A2RUB6 948 aa12.95□□□□□ -0.34
NIF3L1-204ENST00000409357 CTIFO43310 598 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-204ENST00000409357 ATP2B3Q16720 1220 aa12.95□□□□□ -0.34
NIF3L1-204ENST00000409357 CCDC125Q86Z20 511 aa12.95□□□□□ -0.34
NIF3L1-204ENST00000409357 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-204ENST00000409357 TSPYL1Q9H0U9 437 aa12.95□□□□□ -0.34
NIF3L1-204ENST00000409357 THRAP3Q9Y2W1 955 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-204ENST00000409357 DISP2A7MBM2 1401 aa12.95□□□□□ -0.34
NIF3L1-204ENST00000409357 SBF2Q86WG5 1849 aa12.94□□□□□ -0.34
NIF3L1-204ENST00000409357 CSB-PGBD3P0DP91 1061 aa12.94□□□□□ -0.34
NIF3L1-204ENST00000409357 RLBP1P12271 317 aa12.94□□□□□ -0.34
NIF3L1-204ENST00000409357 CBX1P83916 185 aa12.94□□□□□ -0.34
NIF3L1-204ENST00000409357 DDX19BQ9UMR2 479 aa12.94□□□□□ -0.34
NIF3L1-204ENST00000409357 MAP3K19Q56UN5 1328 aa12.94□□□□□ -0.34
NIF3L1-204ENST00000409357 TPM3P06753 285 aa12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 NUCB1Q02818 461 aa12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 RABEP1Q15276 862 aa12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 ZKSCAN2Q63HK3 967 aa12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 CAVIN1Q6NZI2 390 aaKnown RBP12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 COG3Q96JB2 828 aa12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 NOLC1Q14978 699 aaKnown RBP eCLIP12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 RRS1Q15050 365 aaKnown RBP12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 FTSJ3Q8IY81 847 aaKnown RBP12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
NIF3L1-204ENST00000409357 TRIM37O94972 964 aa12.92□□□□□ -0.34
NIF3L1-204ENST00000409357 GAS2L2Q8NHY3 880 aa12.92□□□□□ -0.34
NIF3L1-204ENST00000409357 ANKRD24Q8TF21 1146 aa12.92□□□□□ -0.34
NIF3L1-204ENST00000409357 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.92□□□□□ -0.34
NIF3L1-204ENST00000409357 FAM208AQ9UK61 1670 aaKnown RBP12.92□□□□□ -0.34
NIF3L1-204ENST00000409357 EN1Q05925 392 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-204ENST00000409357 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
NIF3L1-204ENST00000409357 CHMP4BQ9H444 224 aaKnown RBP12.91□□□□□ -0.34
NIF3L1-204ENST00000409357 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
NIF3L1-204ENST00000409357 FAM196AQ6ZSG2 479 aa12.9□□□□□ -0.34
NIF3L1-204ENST00000409357 PTF1AQ7RTS3 328 aa12.9□□□□□ -0.34
NIF3L1-204ENST00000409357 IP6K1Q92551 441 aa12.9□□□□□ -0.34
NIF3L1-204ENST00000409357 RUNDC1Q96C34 613 aa12.9□□□□□ -0.34
NIF3L1-204ENST00000409357 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
NIF3L1-204ENST00000409357 BCL2L12Q9HB09 334 aa12.9□□□□□ -0.34
NIF3L1-204ENST00000409357 NLRP2Q9NX02 1062 aa12.9□□□□□ -0.34
NIF3L1-204ENST00000409357 ANKRD26Q9UPS8 1709 aa12.9□□□□□ -0.35
NIF3L1-204ENST00000409357 HOXC9P31274 260 aa12.89□□□□□ -0.35
NIF3L1-204ENST00000409357 DDB1Q16531 1140 aa12.89□□□□□ -0.35
NIF3L1-204ENST00000409357 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
NIF3L1-204ENST00000409357 SYAP1Q96A49 352 aaPredicted RBP12.89□□□□□ -0.35
NIF3L1-204ENST00000409357 OVOS2A0A0G2JMS6 1433 aa12.89□□□□□ -0.35
NIF3L1-204ENST00000409357 TULP2O00295 520 aa12.89□□□□□ -0.35
NIF3L1-204ENST00000409357 PHF14O94880 888 aa12.89□□□□□ -0.35
NIF3L1-204ENST00000409357 CHRM1P11229 460 aaPredicted RBP12.89□□□□□ -0.35
NIF3L1-204ENST00000409357 CDK11BP21127 795 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms