RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 ZNF831Q5JPB2 1677 aa21.53■■□□□ 1.04
SSB-202ENST00000409333 TRIM27P14373 513 aa21.52■■□□□ 1.04
SSB-202ENST00000409333 G2E3Q7L622 706 aa21.52■■□□□ 1.04
SSB-202ENST00000409333 N4BP2Q86UW6 1770 aaPredicted RBP21.52■■□□□ 1.03
SSB-202ENST00000409333 PALLDQ8WX93 1383 aa21.51■■□□□ 1.03
SSB-202ENST00000409333 ATF7IPQ6VMQ6 1270 aa21.51■■□□□ 1.03
SSB-202ENST00000409333 SLC4A9Q96Q91 983 aa21.51■■□□□ 1.03
SSB-202ENST00000409333 ANXA1P04083 346 aa21.51■■□□□ 1.03
SSB-202ENST00000409333 CLUAP1Q96AJ1 413 aa21.51■■□□□ 1.03
SSB-202ENST00000409333 RLBP1P12271 317 aa21.5■■□□□ 1.03
SSB-202ENST00000409333 PROSER3Q2NL68 480 aa21.5■■□□□ 1.03
SSB-202ENST00000409333 FAM196AQ6ZSG2 479 aa21.5■■□□□ 1.03
SSB-202ENST00000409333 VSIG10Q8N0Z9 540 aa21.5■■□□□ 1.03
SSB-202ENST00000409333 PANK1Q8TE04 598 aa21.5■■□□□ 1.03
SSB-202ENST00000409333 CHMP4AQ9BY43 222 aa21.5■■□□□ 1.03
SSB-202ENST00000409333 TAF1LQ8IZX4 1826 aa21.5■■□□□ 1.03
SSB-202ENST00000409333 IPO8O15397 1037 aaKnown RBP21.49■■□□□ 1.03
SSB-202ENST00000409333 DBF4Q9UBU7 674 aaPredicted RBP21.49■■□□□ 1.03
SSB-202ENST00000409333 MYH14Q7Z406 1995 aaKnown RBP21.49■■□□□ 1.03
SSB-202ENST00000409333 PDE3AQ14432 1141 aa21.48■■□□□ 1.03
SSB-202ENST00000409333 DNAJC10Q8IXB1 793 aa21.48■■□□□ 1.03
SSB-202ENST00000409333 ARHGAP45Q92619 1136 aa21.48■■□□□ 1.03
SSB-202ENST00000409333 PHAXQ9H814 394 aaKnown RBP21.48■■□□□ 1.03
SSB-202ENST00000409333 PDIA6Q15084 440 aa21.48■■□□□ 1.03
SSB-202ENST00000409333 CRBNQ96SW2 442 aa21.48■■□□□ 1.03
SSB-202ENST00000409333 TNS1Q9HBL0 1735 aaKnown RBP21.47■■□□□ 1.03
SSB-202ENST00000409333 PIP4K2AP48426 406 aaPredicted RBP21.47■■□□□ 1.03
SSB-202ENST00000409333 FLIIQ13045 1269 aa21.47■■□□□ 1.03
SSB-202ENST00000409333 SMARCC1Q92922 1105 aaPredicted RBP21.47■■□□□ 1.03
SSB-202ENST00000409333 PTPRCP08575 1304 aa21.47■■□□□ 1.03
SSB-202ENST00000409333 FTSJ3Q8IY81 847 aaKnown RBP21.46■■□□□ 1.03
SSB-202ENST00000409333 DZIP1LQ8IYY4 767 aaKnown RBP21.46■■□□□ 1.03
SSB-202ENST00000409333 RREB1Q92766 1687 aa21.46■■□□□ 1.03
SSB-202ENST00000409333 LOC102724428A0A0B4J2F2 783 aa21.46■■□□□ 1.03
SSB-202ENST00000409333 SIK1P57059 783 aa21.46■■□□□ 1.03
SSB-202ENST00000409333 EXOC6Q8TAG9 804 aa21.46■■□□□ 1.03
SSB-202ENST00000409333 BCL11BQ9C0K0 894 aaPredicted RBP21.46■■□□□ 1.03
SSB-202ENST00000409333 DDX21Q9NR30 783 aaKnown RBP eCLIP21.46■■□□□ 1.03
SSB-202ENST00000409333 ARFGEF2Q9Y6D5 1785 aa21.45■■□□□ 1.02
SSB-202ENST00000409333 MYL6BP14649 208 aa21.44■■□□□ 1.02
SSB-202ENST00000409333 TEX13AQ9BXU3 409 aaPredicted RBP21.44■■□□□ 1.02
SSB-202ENST00000409333 API5Q9BZZ5 524 aaKnown RBP21.44■■□□□ 1.02
SSB-202ENST00000409333 COG6Q9Y2V7 657 aa21.44■■□□□ 1.02
SSB-202ENST00000409333 NUP188Q5SRE5 1749 aa21.44■■□□□ 1.02
SSB-202ENST00000409333 TRIM37O94972 964 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 A1BGP04217 495 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 ATP6V1AP38606 617 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 FKBP5Q13451 457 aaPredicted RBP21.43■■□□□ 1.02
SSB-202ENST00000409333 HYPKQ9NX55 129 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 ABCC4O15439 1325 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 ERBB4Q15303 1308 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 NBPF26B4DH59 902 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 MS4A1P11836 297 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 NBPF14Q5TI25 921 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 NBPF10Q6P3W6 841 aaKnown RBP21.43■■□□□ 1.02
SSB-202ENST00000409333 LRP10Q7Z4F1 713 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 NBPF15Q8N660 670 aa21.43■■□□□ 1.02
SSB-202ENST00000409333 TMEM57Q8N5G2 664 aa21.42■■□□□ 1.02
SSB-202ENST00000409333 F6X3S4 739 aa21.41■■□□□ 1.02
SSB-202ENST00000409333 CYP19A1P11511 503 aaPredicted RBP21.41■■□□□ 1.02
SSB-202ENST00000409333 ITPK1Q13572 414 aa21.41■■□□□ 1.02
SSB-202ENST00000409333 STARD3NLO95772 234 aa21.41■■□□□ 1.02
SSB-202ENST00000409333 AFDNP55196 1824 aaKnown RBP21.4■■□□□ 1.02
SSB-202ENST00000409333 KCNQ4P56696 695 aa21.39■■□□□ 1.01
SSB-202ENST00000409333 MVPQ14764 893 aaKnown RBP21.39■■□□□ 1.01
SSB-202ENST00000409333 PXDNLA1KZ92 1463 aa21.38■■□□□ 1.01
SSB-202ENST00000409333 AIMP1Q12904 312 aaKnown RBP21.38■■□□□ 1.01
SSB-202ENST00000409333 ERICH6BQ5W0A0 696 aa21.38■■□□□ 1.01
SSB-202ENST00000409333 ITPRIPQ8IWB1 547 aa21.38■■□□□ 1.01
SSB-202ENST00000409333 XAGE3Q8WTP9 111 aa21.38■■□□□ 1.01
SSB-202ENST00000409333 ADCY9O60503 1353 aa21.38■■□□□ 1.01
SSB-202ENST00000409333 COPS6Q7L5N1 327 aa21.37■■□□□ 1.01
SSB-202ENST00000409333 ZBTB1Q9Y2K1 713 aa21.37■■□□□ 1.01
SSB-202ENST00000409333 C4BP0C0L5 1744 aa21.36■■□□□ 1.01
SSB-202ENST00000409333 PI4KAP2A4QPH2 592 aa21.36■■□□□ 1.01
SSB-202ENST00000409333 SLC4A10Q6U841 1118 aa21.36■■□□□ 1.01
SSB-202ENST00000409333 PI4KAP1Q8N8J0 262 aa21.36■■□□□ 1.01
SSB-202ENST00000409333 LINC00116Q8NCU8 138 aa21.36■■□□□ 1.01
SSB-202ENST00000409333 RGPD3A6NKT7 1758 aaPredicted RBP21.36■■□□□ 1.01
SSB-202ENST00000409333 RGPD4Q7Z3J3 1758 aa21.36■■□□□ 1.01
SSB-202ENST00000409333 CCNL1Q9UK58 526 aaPredicted RBP21.36■■□□□ 1.01
SSB-202ENST00000409333 NUP98P52948 1817 aa21.35■■□□□ 1.01
SSB-202ENST00000409333 CRKLP46109 303 aaKnown RBP21.35■■□□□ 1.01
SSB-202ENST00000409333 INTS3Q68E01 1043 aaKnown RBP21.34■■□□□ 1.01
SSB-202ENST00000409333 INTS5Q6P9B9 1019 aaKnown RBP21.34■■□□□ 1.01
SSB-202ENST00000409333 ZNF330Q9Y3S2 320 aaPredicted RBP21.34■■□□□ 1.01
SSB-202ENST00000409333 ANKRD36CQ5JPF3 1778 aa21.34■■□□□ 1.01
SSB-202ENST00000409333 KSR2Q6VAB6 950 aa21.33■■□□□ 1.01
SSB-202ENST00000409333 DNAAF4Q8WXU2 420 aa21.33■■□□□ 1.01
SSB-202ENST00000409333 CCDC87Q9NVE4 849 aa21.33■■□□□ 1.01
SSB-202ENST00000409333 DDX19BQ9UMR2 479 aa21.33■■□□□ 1.01
SSB-202ENST00000409333 MAP3K2Q9Y2U5 619 aa21.33■■□□□ 1.01
SSB-202ENST00000409333 DDX58O95786 925 aaKnown RBP21.33■■□□□ 1
SSB-202ENST00000409333 TTLL7Q6ZT98 887 aa21.33■■□□□ 1
SSB-202ENST00000409333 UBR3Q6ZT12 1888 aa21.32■■□□□ 1
SSB-202ENST00000409333 BCORQ6W2J9 1755 aa21.31■■□□□ 1
SSB-202ENST00000409333 ANKRD13DQ6ZTN6 518 aa21.31■■□□□ 1
SSB-202ENST00000409333 ATP10DQ9P241 1426 aa21.31■■□□□ 1
SSB-202ENST00000409333 CCT4P50991 539 aaKnown RBP21.31■■□□□ 1
SSB-202ENST00000409333 RIC3Q7Z5B4 369 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms