RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 PTF1AQ7RTS3 328 aa16.76■□□□□ 0.27
LIMS2-203ENST00000409254 SCN7AQ01118 1682 aa16.75■□□□□ 0.27
LIMS2-203ENST00000409254 ANKRD36CQ5JPF3 1778 aa16.75■□□□□ 0.27
LIMS2-203ENST00000409254 CENPBP07199 599 aaPredicted RBP16.75■□□□□ 0.27
LIMS2-203ENST00000409254 HDGFL1Q5TGJ6 251 aa16.75■□□□□ 0.27
LIMS2-203ENST00000409254 SLC4A9Q96Q91 983 aa16.75■□□□□ 0.27
LIMS2-203ENST00000409254 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
LIMS2-203ENST00000409254 CCNL1Q9UK58 526 aaPredicted RBP16.75■□□□□ 0.27
LIMS2-203ENST00000409254 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
LIMS2-203ENST00000409254 ATP6V1AP38606 617 aa16.74■□□□□ 0.27
LIMS2-203ENST00000409254 TSPYL6Q8N831 410 aa16.74■□□□□ 0.27
LIMS2-203ENST00000409254 DBF4Q9UBU7 674 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-203ENST00000409254 KIF16BQ96L93 1317 aa16.73■□□□□ 0.27
LIMS2-203ENST00000409254 NUP98P52948 1817 aa16.73■□□□□ 0.27
LIMS2-203ENST00000409254 CYP19A1P11511 503 aaPredicted RBP16.73■□□□□ 0.27
LIMS2-203ENST00000409254 TXNRD1Q16881 649 aa16.73■□□□□ 0.27
LIMS2-203ENST00000409254 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
LIMS2-203ENST00000409254 STK31Q9BXU1 1019 aa16.73■□□□□ 0.27
LIMS2-203ENST00000409254 RGL2O15211 777 aa16.72■□□□□ 0.27
LIMS2-203ENST00000409254 KRT24Q2M2I5 525 aa16.72■□□□□ 0.27
LIMS2-203ENST00000409254 UPF1Q92900 1129 aaKnown RBP eCLIP16.72■□□□□ 0.27
LIMS2-203ENST00000409254 DDX21Q9NR30 783 aaKnown RBP eCLIP16.72■□□□□ 0.27
LIMS2-203ENST00000409254 RARSP54136 660 aaKnown RBP16.71■□□□□ 0.27
LIMS2-203ENST00000409254 ITPK1Q13572 414 aa16.71■□□□□ 0.27
LIMS2-203ENST00000409254 DNAJC10Q8IXB1 793 aa16.71■□□□□ 0.27
LIMS2-203ENST00000409254 CCDC87Q9NVE4 849 aa16.71■□□□□ 0.27
LIMS2-203ENST00000409254 HYPKQ9NX55 129 aa16.71■□□□□ 0.27
LIMS2-203ENST00000409254 PXDNLA1KZ92 1463 aa16.7■□□□□ 0.26
LIMS2-203ENST00000409254 ADRA2BP18089 450 aa16.7■□□□□ 0.26
LIMS2-203ENST00000409254 IL6STP40189 918 aaPredicted RBP16.7■□□□□ 0.26
LIMS2-203ENST00000409254 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
LIMS2-203ENST00000409254 USP16Q9Y5T5 823 aa16.7■□□□□ 0.26
LIMS2-203ENST00000409254 PTPRCP08575 1304 aa16.7■□□□□ 0.26
LIMS2-203ENST00000409254 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
LIMS2-203ENST00000409254 LRRC4BQ9NT99 713 aa16.69■□□□□ 0.26
LIMS2-203ENST00000409254 IBTKQ9P2D0 1353 aaPredicted RBP16.68■□□□□ 0.26
LIMS2-203ENST00000409254 PROM2Q8N271 834 aa16.68■□□□□ 0.26
LIMS2-203ENST00000409254 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
LIMS2-203ENST00000409254 AFDNP55196 1824 aaKnown RBP16.68■□□□□ 0.26
LIMS2-203ENST00000409254 PRAMEF22A3QJZ6 481 aa16.67■□□□□ 0.26
LIMS2-203ENST00000409254 ELL2O00472 640 aaPredicted RBP16.67■□□□□ 0.26
LIMS2-203ENST00000409254 SSFA2P28290 1259 aa16.67■□□□□ 0.26
LIMS2-203ENST00000409254 PDIA6Q15084 440 aa16.67■□□□□ 0.26
LIMS2-203ENST00000409254 LRP10Q7Z4F1 713 aa16.67■□□□□ 0.26
LIMS2-203ENST00000409254 SSH1Q8WYL5 1049 aa16.67■□□□□ 0.26
LIMS2-203ENST00000409254 ARHGAP45Q92619 1136 aa16.67■□□□□ 0.26
LIMS2-203ENST00000409254 SMC4Q9NTJ3 1288 aa16.67■□□□□ 0.26
LIMS2-203ENST00000409254 COL24A1Q17RW2 1714 aa16.67■□□□□ 0.26
LIMS2-203ENST00000409254 RPS6KA4O75676 772 aa16.66■□□□□ 0.26
LIMS2-203ENST00000409254 EIF2S2P20042 333 aaKnown RBP16.66■□□□□ 0.26
LIMS2-203ENST00000409254 INTS5Q6P9B9 1019 aaKnown RBP16.66■□□□□ 0.26
LIMS2-203ENST00000409254 FLAD1Q8NFF5 587 aa16.66■□□□□ 0.26
LIMS2-203ENST00000409254 CHPF2Q9P2E5 772 aa16.66■□□□□ 0.26
LIMS2-203ENST00000409254 COL15A1P39059 1388 aa16.65■□□□□ 0.26
LIMS2-203ENST00000409254 A0A087WZG4 1122 aa16.65■□□□□ 0.26
LIMS2-203ENST00000409254 IPO8O15397 1037 aaKnown RBP16.65■□□□□ 0.26
LIMS2-203ENST00000409254 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
LIMS2-203ENST00000409254 EN1Q05925 392 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-203ENST00000409254 MRPL50Q8N5N7 158 aaKnown RBP16.65■□□□□ 0.26
LIMS2-203ENST00000409254 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.65■□□□□ 0.26
LIMS2-203ENST00000409254 AK7Q96M32 723 aa16.65■□□□□ 0.26
LIMS2-203ENST00000409254 ZBTB1Q9Y2K1 713 aa16.65■□□□□ 0.26
LIMS2-203ENST00000409254 RNF123Q5XPI4 1314 aa16.65■□□□□ 0.26
LIMS2-203ENST00000409254 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
LIMS2-203ENST00000409254 DDX58O95786 925 aaKnown RBP16.64■□□□□ 0.25
LIMS2-203ENST00000409254 SLC4A2P04920 1241 aa16.64■□□□□ 0.25
LIMS2-203ENST00000409254 EZH2Q15910 746 aaKnown RBP16.64■□□□□ 0.25
LIMS2-203ENST00000409254 NBPF14Q5TI25 921 aa16.64■□□□□ 0.25
LIMS2-203ENST00000409254 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
LIMS2-203ENST00000409254 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
LIMS2-203ENST00000409254 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
LIMS2-203ENST00000409254 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
LIMS2-203ENST00000409254 RTCBQ9Y3I0 505 aaKnown RBP16.64■□□□□ 0.25
LIMS2-203ENST00000409254 A1BGP04217 495 aa16.63■□□□□ 0.25
LIMS2-203ENST00000409254 MS4A1P11836 297 aa16.63■□□□□ 0.25
LIMS2-203ENST00000409254 FLIIQ13045 1269 aa16.63■□□□□ 0.25
LIMS2-203ENST00000409254 CASZ1Q86V15 1759 aa16.63■□□□□ 0.25
LIMS2-203ENST00000409254 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
LIMS2-203ENST00000409254 ERVV-1B6SEH8 477 aa16.61■□□□□ 0.25
LIMS2-203ENST00000409254 DEFB132Q7Z7B7 95 aa16.61■□□□□ 0.25
LIMS2-203ENST00000409254 API5Q9BZZ5 524 aaKnown RBP16.61■□□□□ 0.25
LIMS2-203ENST00000409254 LAMB2P55268 1798 aa16.61■□□□□ 0.25
LIMS2-203ENST00000409254 MYH3P11055 1940 aa16.6■□□□□ 0.25
LIMS2-203ENST00000409254 GNPATO15228 680 aa16.6■□□□□ 0.25
LIMS2-203ENST00000409254 PROSER3Q2NL68 480 aa16.6■□□□□ 0.25
LIMS2-203ENST00000409254 STK32BQ9NY57 414 aa16.6■□□□□ 0.25
LIMS2-203ENST00000409254 CLEC4GQ6UXB4 293 aa16.59■□□□□ 0.25
LIMS2-203ENST00000409254 KIF6Q6ZMV9 814 aa16.59■□□□□ 0.25
LIMS2-203ENST00000409254 PLBD2Q8NHP8 589 aa16.59■□□□□ 0.25
LIMS2-203ENST00000409254 MAP3K15Q6ZN16 1313 aa16.59■□□□□ 0.25
LIMS2-203ENST00000409254 BCAR3O75815 825 aa16.58■□□□□ 0.24
LIMS2-203ENST00000409254 MYL6BP14649 208 aa16.58■□□□□ 0.24
LIMS2-203ENST00000409254 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.24
LIMS2-203ENST00000409254 FKBP5Q13451 457 aaPredicted RBP16.58■□□□□ 0.24
LIMS2-203ENST00000409254 PDE3AQ14432 1141 aa16.58■□□□□ 0.24
LIMS2-203ENST00000409254 SLC15A2Q16348 729 aa16.58■□□□□ 0.24
LIMS2-203ENST00000409254 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.24
LIMS2-203ENST00000409254 ZKSCAN2Q63HK3 967 aa16.58■□□□□ 0.24
LIMS2-203ENST00000409254 KSR2Q6VAB6 950 aa16.58■□□□□ 0.24
LIMS2-203ENST00000409254 ATF7IPQ6VMQ6 1270 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms