RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 LARP1Q6PKG0 1096 aaKnown RBP5.55□□□□□ -1.52
GTDC1-206ENST00000409214 CACTIN-AS1Q8N1I8 211 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 SDR16C5Q8N3Y7 309 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 EPAS1Q99814 870 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 SNTG2Q9NY99 539 aa5.55□□□□□ -1.52
GTDC1-206ENST00000409214 GPR182O15218 404 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 NRDCO43847 1150 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 LONRF1Q17RB8 773 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 NGDNQ8NEJ9 315 aaKnown RBP5.54□□□□□ -1.52
GTDC1-206ENST00000409214 AVENQ9NQS1 362 aaPredicted RBP5.54□□□□□ -1.52
GTDC1-206ENST00000409214 METTL5Q9NRN9 209 aaKnown RBP5.54□□□□□ -1.52
GTDC1-206ENST00000409214 SWAP70Q9UH65 585 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 HMGB1P1B2RPK0 211 aaPredicted RBP5.54□□□□□ -1.52
GTDC1-206ENST00000409214 OATP04181 439 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 VIL1P09327 827 aaKnown RBP5.54□□□□□ -1.52
GTDC1-206ENST00000409214 TERF1P54274 439 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 PSMD2Q13200 908 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 LILRB2Q8N423 598 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 NKX2-3Q8TAU0 364 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 CCDC85AQ96PX6 553 aaPredicted RBP5.54□□□□□ -1.52
GTDC1-206ENST00000409214 ZBTB3Q9H5J0 574 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 PCDH10Q9P2E7 1040 aa5.54□□□□□ -1.52
GTDC1-206ENST00000409214 DHX16O60231 1041 aaKnown RBP5.53□□□□□ -1.52
GTDC1-206ENST00000409214 FOSP01100 380 aaPredicted RBP5.53□□□□□ -1.52
GTDC1-206ENST00000409214 NEFMP07197 916 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 LDHCP07864 332 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 MZF1P28698 734 aaPredicted RBP5.53□□□□□ -1.52
GTDC1-206ENST00000409214 FKBP4Q02790 459 aaKnown RBP eCLIP5.53□□□□□ -1.52
GTDC1-206ENST00000409214 FKBP5Q13451 457 aaPredicted RBP5.53□□□□□ -1.52
GTDC1-206ENST00000409214 ARMCX6Q7L4S7 300 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 ATL2Q8NHH9 583 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 C1orf216Q8TAB5 229 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 LRRC27Q9C0I9 530 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 AS3MTQ9HBK9 375 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 ARNT2Q9HBZ2 717 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 CCDC87Q9NVE4 849 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 POTEMA6NI47 508 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 CDC45O75419 566 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 RRM1P23921 792 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 ETFBP38117 255 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 RASA3Q14644 834 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 SWI5Q1ZZU3 235 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 ZKSCAN2Q63HK3 967 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 APBA2Q99767 749 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 CENPOQ9BU64 300 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 CNTN3Q9P232 1028 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 TNIKQ9UKE5 1360 aa5.53□□□□□ -1.52
GTDC1-206ENST00000409214 SFI1A8K8P3 1242 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 PRSS47A8MTI9 375 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 IFRD1O00458 451 aaPredicted RBP5.52□□□□□ -1.53
GTDC1-206ENST00000409214 PRPF3O43395 683 aaKnown RBP5.52□□□□□ -1.53
GTDC1-206ENST00000409214 MASP1P48740 699 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 EHHADHQ08426 723 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 NFE2L2Q16236 605 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 C21orf62-AS1Q17RA5 79 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 PLEKHM2Q8IWE5 1019 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 OTUD5Q96G74 571 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 PCDHGA10Q9Y5H3 936 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 SCGB1D2O95969 90 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 LIG1P18858 919 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 EIF4G2P78344 907 aaKnown RBP eCLIP5.52□□□□□ -1.53
GTDC1-206ENST00000409214 DSC3Q14574 896 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 CXorf38Q8TB03 319 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 HOMER2Q9NSB8 354 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 ZRANB1Q9UGI0 708 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 SHTN1A0MZ66 631 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 PRPF40AO75400 957 aaKnown RBP5.52□□□□□ -1.53
GTDC1-206ENST00000409214 PAK2Q13177 524 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 COL19A1Q14993 1142 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 PPP4R4Q6NUP7 873 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 TMEM92Q6UXU6 159 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 PDILTQ8N807 584 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 PDZRN3Q9UPQ7 1066 aa5.52□□□□□ -1.53
GTDC1-206ENST00000409214 F6X3S4 739 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 TSPAN6O43657 245 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 SRGNP10124 158 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 COL9A1P20849 921 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 MPSTP25325 297 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 POTEGQ6S5H5 508 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 SKAP1Q86WV1 359 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 TMC1Q8TDI8 760 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 KCNH8Q96L42 1107 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 RCCD1A6NED2 376 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 ALDH1L1O75891 902 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 SEC13P55735 322 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 NFE2Q16621 373 aaPredicted RBP5.51□□□□□ -1.53
GTDC1-206ENST00000409214 PRPF38BQ5VTL8 546 aaKnown RBP5.51□□□□□ -1.53
GTDC1-206ENST00000409214 HNRNPLLQ8WVV9 542 aaKnown RBP5.51□□□□□ -1.53
GTDC1-206ENST00000409214 EMID1Q96A84 441 aaPredicted RBP5.51□□□□□ -1.53
GTDC1-206ENST00000409214 TMEM106CQ9BVX2 250 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 MUC3BQ9H195 1237 aa5.51□□□□□ -1.53
GTDC1-206ENST00000409214 CHMP4BP1P59074 171 aa5.5□□□□□ -1.53
GTDC1-206ENST00000409214 GOLGA2Q08379 1002 aa5.5□□□□□ -1.53
GTDC1-206ENST00000409214 ICE2Q659A1 982 aa5.5□□□□□ -1.53
GTDC1-206ENST00000409214 PHF12Q96QT6 1004 aa5.5□□□□□ -1.53
GTDC1-206ENST00000409214 COPRSQ9NQ92 184 aa5.5□□□□□ -1.53
GTDC1-206ENST00000409214 CYLDQ9NQC7 956 aa5.5□□□□□ -1.53
GTDC1-206ENST00000409214 FAM198AQ9UFP1 575 aa5.5□□□□□ -1.53
GTDC1-206ENST00000409214 LEMD3Q9Y2U8 911 aa5.5□□□□□ -1.53
GTDC1-206ENST00000409214 CLIP1P30622 1438 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms