RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 RC3H1Q5TC82 1133 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-203ENST00000409129 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
NIF3L1-203ENST00000409129 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-203ENST00000409129 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-203ENST00000409129 KNSTRNQ9Y448 316 aa12.53□□□□□ -0.4
NIF3L1-203ENST00000409129 VIRMAQ69YN4 1812 aaKnown RBP12.53□□□□□ -0.4
NIF3L1-203ENST00000409129 MTHFSP49914 203 aa12.52□□□□□ -0.41
NIF3L1-203ENST00000409129 AEBP1Q8IUX7 1158 aa12.52□□□□□ -0.41
NIF3L1-203ENST00000409129 AFDNP55196 1824 aaKnown RBP12.52□□□□□ -0.41
NIF3L1-203ENST00000409129 KDRP35968 1356 aa12.52□□□□□ -0.41
NIF3L1-203ENST00000409129 FOXN1O15353 648 aa12.51□□□□□ -0.41
NIF3L1-203ENST00000409129 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
NIF3L1-203ENST00000409129 DLEC1Q9Y238 1755 aa12.51□□□□□ -0.41
NIF3L1-203ENST00000409129 DICER1Q9UPY3 1922 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-203ENST00000409129 RPS6KA4O75676 772 aa12.5□□□□□ -0.41
NIF3L1-203ENST00000409129 IL13P35225 146 aa12.5□□□□□ -0.41
NIF3L1-203ENST00000409129 RASSF7Q02833 373 aa12.5□□□□□ -0.41
NIF3L1-203ENST00000409129 C1orf141Q5JVX7 400 aa12.5□□□□□ -0.41
NIF3L1-203ENST00000409129 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
NIF3L1-203ENST00000409129 NFATC2IPQ8NCF5 419 aa12.5□□□□□ -0.41
NIF3L1-203ENST00000409129 ARHGEF1Q92888 912 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-203ENST00000409129 MKRN1Q9UHC7 482 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-203ENST00000409129 KDM6AO15550 1401 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-203ENST00000409129 CNTNAP4Q9C0A0 1308 aa12.49□□□□□ -0.41
NIF3L1-203ENST00000409129 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
NIF3L1-203ENST00000409129 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
NIF3L1-203ENST00000409129 CHRNA5P30532 468 aa12.48□□□□□ -0.41
NIF3L1-203ENST00000409129 RFC4P35249 363 aa12.48□□□□□ -0.41
NIF3L1-203ENST00000409129 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
NIF3L1-203ENST00000409129 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
NIF3L1-203ENST00000409129 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
NIF3L1-203ENST00000409129 GYS1P13807 737 aa12.47□□□□□ -0.41
NIF3L1-203ENST00000409129 SPDYE4A6NLX3 237 aa12.46□□□□□ -0.41
NIF3L1-203ENST00000409129 CRKLP46109 303 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-203ENST00000409129 DALRD3Q5D0E6 543 aaKnown RBP12.46□□□□□ -0.41
NIF3L1-203ENST00000409129 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
NIF3L1-203ENST00000409129 PIM2Q9P1W9 311 aa12.46□□□□□ -0.41
NIF3L1-203ENST00000409129 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
NIF3L1-203ENST00000409129 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
NIF3L1-203ENST00000409129 KIF7Q2M1P5 1343 aa12.45□□□□□ -0.42
NIF3L1-203ENST00000409129 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
NIF3L1-203ENST00000409129 TNRC18O15417 2968 aaPredicted RBP12.44□□□□□ -0.42
NIF3L1-203ENST00000409129 POTECB2RU33 542 aa12.44□□□□□ -0.42
NIF3L1-203ENST00000409129 VEGFAP15692 232 aaPredicted RBP12.44□□□□□ -0.42
NIF3L1-203ENST00000409129 DDR1Q08345 913 aa12.44□□□□□ -0.42
NIF3L1-203ENST00000409129 LGR6Q9HBX8 967 aa12.44□□□□□ -0.42
NIF3L1-203ENST00000409129 PCDH10Q9P2E7 1040 aa12.44□□□□□ -0.42
NIF3L1-203ENST00000409129 TJP1Q07157 1748 aa12.43□□□□□ -0.42
NIF3L1-203ENST00000409129 FER1L6Q2WGJ9 1857 aa12.43□□□□□ -0.42
NIF3L1-203ENST00000409129 GLTPD2A6NH11 291 aa12.43□□□□□ -0.42
NIF3L1-203ENST00000409129 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
NIF3L1-203ENST00000409129 INTS5Q6P9B9 1019 aaKnown RBP12.43□□□□□ -0.42
NIF3L1-203ENST00000409129 SLC52A2Q9HAB3 445 aa12.43□□□□□ -0.42
NIF3L1-203ENST00000409129 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
NIF3L1-203ENST00000409129 RNMTO43148 476 aaKnown RBP12.42□□□□□ -0.42
NIF3L1-203ENST00000409129 HMOX1P09601 288 aa12.42□□□□□ -0.42
NIF3L1-203ENST00000409129 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
NIF3L1-203ENST00000409129 POTEJP0CG39 1038 aa12.42□□□□□ -0.42
NIF3L1-203ENST00000409129 ABHD8Q96I13 439 aa12.42□□□□□ -0.42
NIF3L1-203ENST00000409129 PRDM10Q9NQV6 1147 aa12.42□□□□□ -0.42
NIF3L1-203ENST00000409129 USP42Q9H9J4 1324 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-203ENST00000409129 DIAPH1O60610 1272 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-203ENST00000409129 LBX1P52954 281 aa12.41□□□□□ -0.42
NIF3L1-203ENST00000409129 CC2D1BQ5T0F9 858 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-203ENST00000409129 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
NIF3L1-203ENST00000409129 ANKRD31Q8N7Z5 1873 aa12.41□□□□□ -0.42
NIF3L1-203ENST00000409129 PDE4DIPQ5VU43 2346 aa12.4□□□□□ -0.42
NIF3L1-203ENST00000409129 NRXN2Q9P2S2 1712 aa12.4□□□□□ -0.42
NIF3L1-203ENST00000409129 SLC39A6Q13433 755 aa12.4□□□□□ -0.42
NIF3L1-203ENST00000409129 MTHFSDQ2M296 383 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-203ENST00000409129 CREBZFQ9NS37 354 aa12.4□□□□□ -0.42
NIF3L1-203ENST00000409129 SCN11AQ9UI33 1791 aa12.4□□□□□ -0.42
NIF3L1-203ENST00000409129 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
NIF3L1-203ENST00000409129 COL11A2P13942 1736 aaPredicted RBP12.4□□□□□ -0.43
NIF3L1-203ENST00000409129 ZPR1O75312 459 aa12.39□□□□□ -0.43
NIF3L1-203ENST00000409129 CYP19A1P11511 503 aaPredicted RBP12.39□□□□□ -0.43
NIF3L1-203ENST00000409129 LMNB1P20700 586 aa12.39□□□□□ -0.43
NIF3L1-203ENST00000409129 TM4SF1P30408 202 aa12.39□□□□□ -0.43
NIF3L1-203ENST00000409129 CTCFP49711 727 aaPredicted RBP12.39□□□□□ -0.43
NIF3L1-203ENST00000409129 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
NIF3L1-203ENST00000409129 USPL1Q5W0Q7 1092 aa12.38□□□□□ -0.43
NIF3L1-203ENST00000409129 SOS1Q07889 1333 aaPredicted RBP12.37□□□□□ -0.43
NIF3L1-203ENST00000409129 POLRMTO00411 1230 aaKnown RBP12.37□□□□□ -0.43
NIF3L1-203ENST00000409129 VEGFBP49765 207 aa12.37□□□□□ -0.43
NIF3L1-203ENST00000409129 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
NIF3L1-203ENST00000409129 NARFQ9UHQ1 456 aa12.37□□□□□ -0.43
NIF3L1-203ENST00000409129 MRC1P22897 1456 aa12.37□□□□□ -0.43
NIF3L1-203ENST00000409129 CASP8AP2Q9UKL3 1982 aa12.37□□□□□ -0.43
NIF3L1-203ENST00000409129 NFKBIEO00221 500 aa12.36□□□□□ -0.43
NIF3L1-203ENST00000409129 HSPA8P11142 646 aaKnown RBP12.36□□□□□ -0.43
NIF3L1-203ENST00000409129 MLLT1Q03111 559 aaPredicted RBP12.36□□□□□ -0.43
NIF3L1-203ENST00000409129 AIDAQ96BJ3 306 aa12.36□□□□□ -0.43
NIF3L1-203ENST00000409129 SCN4AP35499 1836 aa12.36□□□□□ -0.43
NIF3L1-203ENST00000409129 NPC1L1Q9UHC9 1359 aa12.35□□□□□ -0.43
NIF3L1-203ENST00000409129 CCDC85CA6NKD9 419 aa12.35□□□□□ -0.43
NIF3L1-203ENST00000409129 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
NIF3L1-203ENST00000409129 CNGB1Q14028 1251 aaPredicted RBP12.35□□□□□ -0.43
NIF3L1-203ENST00000409129 CHADLQ6NUI6 762 aa12.35□□□□□ -0.43
NIF3L1-203ENST00000409129 ZBTB1Q9Y2K1 713 aa12.35□□□□□ -0.43
NIF3L1-203ENST00000409129 COL15A1P39059 1388 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms