RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ESYT1Q9BSJ8 1104 aa20.53■□□□□ 0.88
SMPD4-202ENST00000409031 TTC31Q49AM3 519 aaPredicted RBP20.53■□□□□ 0.88
SMPD4-202ENST00000409031 PLCD3Q8N3E9 789 aa20.53■□□□□ 0.88
SMPD4-202ENST00000409031 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
SMPD4-202ENST00000409031 TUBB4BP68371 445 aa20.53■□□□□ 0.88
SMPD4-202ENST00000409031 ZMYM3Q14202 1370 aa20.53■□□□□ 0.88
SMPD4-202ENST00000409031 CDK19Q9BWU1 502 aa20.53■□□□□ 0.88
SMPD4-202ENST00000409031 SCAF11Q99590 1463 aaKnown RBP20.53■□□□□ 0.88
SMPD4-202ENST00000409031 C10orf67Q8IYJ2 551 aa20.52■□□□□ 0.88
SMPD4-202ENST00000409031 LMBRD1Q9NUN5 540 aa20.52■□□□□ 0.88
SMPD4-202ENST00000409031 NSD2O96028 1365 aa20.52■□□□□ 0.88
SMPD4-202ENST00000409031 ZNF692Q9BU19 519 aaPredicted RBP20.52■□□□□ 0.88
SMPD4-202ENST00000409031 NPHP3Q7Z494 1330 aa20.52■□□□□ 0.87
SMPD4-202ENST00000409031 RNF187Q5TA31 235 aaPredicted RBP20.52■□□□□ 0.87
SMPD4-202ENST00000409031 ANKRD44Q8N8A2 993 aa20.52■□□□□ 0.87
SMPD4-202ENST00000409031 USP26Q9BXU7 913 aa20.52■□□□□ 0.87
SMPD4-202ENST00000409031 CDK13Q14004 1512 aaKnown RBP20.51■□□□□ 0.87
SMPD4-202ENST00000409031 PER1O15534 1290 aaPredicted RBP20.51■□□□□ 0.87
SMPD4-202ENST00000409031 DMTNQ08495 405 aa20.51■□□□□ 0.87
SMPD4-202ENST00000409031 MCM6Q14566 821 aa20.51■□□□□ 0.87
SMPD4-202ENST00000409031 DDX54Q8TDD1 881 aaKnown RBP20.51■□□□□ 0.87
SMPD4-202ENST00000409031 DNAJC25Q9H1X3 360 aa20.51■□□□□ 0.87
SMPD4-202ENST00000409031 BCL2L12Q9HB09 334 aa20.51■□□□□ 0.87
SMPD4-202ENST00000409031 TNNQ9UQP3 1299 aa20.51■□□□□ 0.87
SMPD4-202ENST00000409031 PDE1AP54750 535 aa20.51■□□□□ 0.87
SMPD4-202ENST00000409031 SIL1Q9H173 461 aa20.51■□□□□ 0.87
SMPD4-202ENST00000409031 NESP48681 1621 aa20.51■□□□□ 0.87
SMPD4-202ENST00000409031 CCDC69A6NI79 296 aa20.51■□□□□ 0.87
SMPD4-202ENST00000409031 DNM1Q05193 864 aaKnown RBP20.51■□□□□ 0.87
SMPD4-202ENST00000409031 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.51■□□□□ 0.87
SMPD4-202ENST00000409031 C8orf76Q96K31 380 aa20.51■□□□□ 0.87
SMPD4-202ENST00000409031 U3KPZ7 1027 aaPredicted RBP20.51■□□□□ 0.87
SMPD4-202ENST00000409031 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
SMPD4-202ENST00000409031 EIF5P55010 431 aaKnown RBP20.5■□□□□ 0.87
SMPD4-202ENST00000409031 CT47A1Q5JQC4 288 aaPredicted RBP20.5■□□□□ 0.87
SMPD4-202ENST00000409031 ASXL1Q8IXJ9 1541 aa20.5■□□□□ 0.87
SMPD4-202ENST00000409031 WASF1Q92558 559 aa20.5■□□□□ 0.87
SMPD4-202ENST00000409031 RAI14Q9P0K7 980 aa20.5■□□□□ 0.87
SMPD4-202ENST00000409031 SPG7Q9UQ90 795 aa20.5■□□□□ 0.87
SMPD4-202ENST00000409031 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
SMPD4-202ENST00000409031 PIK3C2GO75747 1445 aa20.49■□□□□ 0.87
SMPD4-202ENST00000409031 CCDC158Q5M9N0 1113 aa20.49■□□□□ 0.87
SMPD4-202ENST00000409031 RBM33Q96EV2 1170 aaKnown RBP20.49■□□□□ 0.87
SMPD4-202ENST00000409031 CEP131Q9UPN4 1083 aa20.49■□□□□ 0.87
SMPD4-202ENST00000409031 POLR3AO14802 1390 aaPredicted RBP20.49■□□□□ 0.87
SMPD4-202ENST00000409031 CAMSAP2Q08AD1 1489 aa20.49■□□□□ 0.87
SMPD4-202ENST00000409031 GAS2L3Q86XJ1 694 aa20.49■□□□□ 0.87
SMPD4-202ENST00000409031 ZSWIM4Q9H7M6 989 aa20.49■□□□□ 0.87
SMPD4-202ENST00000409031 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
SMPD4-202ENST00000409031 TUBBP07437 444 aa20.48■□□□□ 0.87
SMPD4-202ENST00000409031 PAFAH1B1P43034 410 aa20.48■□□□□ 0.87
SMPD4-202ENST00000409031 ZFP91Q96JP5 570 aaPredicted RBP20.48■□□□□ 0.87
SMPD4-202ENST00000409031 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.48■□□□□ 0.871e-6■■■□□ 17.9
SMPD4-202ENST00000409031 BIN1O00499 593 aa20.48■□□□□ 0.87
SMPD4-202ENST00000409031 DCTPP1Q9H773 170 aa20.48■□□□□ 0.87
SMPD4-202ENST00000409031 SPA17Q15506 151 aa20.48■□□□□ 0.87
SMPD4-202ENST00000409031 GOLGA1Q92805 767 aa20.48■□□□□ 0.87
SMPD4-202ENST00000409031 A0A1B0GUL7 405 aa20.47■□□□□ 0.87
SMPD4-202ENST00000409031 LUZP1Q86V48 1076 aa20.47■□□□□ 0.87
SMPD4-202ENST00000409031 UBASH3AP57075 661 aa20.47■□□□□ 0.87
SMPD4-202ENST00000409031 NLRP6P59044 892 aa20.47■□□□□ 0.87
SMPD4-202ENST00000409031 TAF4BQ92750 862 aa20.47■□□□□ 0.87
SMPD4-202ENST00000409031 GTF3C6Q969F1 213 aa20.47■□□□□ 0.87
SMPD4-202ENST00000409031 EVI5LQ96CN4 794 aa20.47■□□□□ 0.87
SMPD4-202ENST00000409031 CNNM3Q8NE01 707 aa20.46■□□□□ 0.87
SMPD4-202ENST00000409031 TMX1Q9H3N1 280 aa20.46■□□□□ 0.87
SMPD4-202ENST00000409031 GRIN2BQ13224 1484 aa20.46■□□□□ 0.87
SMPD4-202ENST00000409031 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
SMPD4-202ENST00000409031 ECHDC1Q9NTX5 307 aa20.46■□□□□ 0.87
SMPD4-202ENST00000409031 ZMYM4Q5VZL5 1548 aa20.46■□□□□ 0.87
SMPD4-202ENST00000409031 CEP112Q8N8E3 955 aa20.45■□□□□ 0.87
SMPD4-202ENST00000409031 CTAGE15A4D2H0 777 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 YEATS4O95619 227 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 CTAGE8P0CG41 777 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 IBSPP21815 317 aaPredicted RBP20.45■□□□□ 0.86
SMPD4-202ENST00000409031 CTAGE6Q86UF2 777 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 PLEKHM2Q8IWE5 1019 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 CTAGE4Q8IX94 777 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 HMG20BQ9P0W2 317 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 TAX1BP1Q86VP1 789 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 F6X3S4 739 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 NF2P35240 595 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 MICALL1Q8N3F8 863 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 DYDC1Q8WWB3 177 aa20.45■□□□□ 0.86
SMPD4-202ENST00000409031 SPINK5Q9NQ38 1064 aaPredicted RBP20.45■□□□□ 0.86
SMPD4-202ENST00000409031 EBAG9O00559 213 aa20.44■□□□□ 0.86
SMPD4-202ENST00000409031 SYT10Q6XYQ8 523 aa20.44■□□□□ 0.86
SMPD4-202ENST00000409031 CCDC91Q7Z6B0 441 aa20.44■□□□□ 0.86
SMPD4-202ENST00000409031 SYT1P21579 422 aa20.44■□□□□ 0.86
SMPD4-202ENST00000409031 GUCY1B3Q02153 619 aa20.44■□□□□ 0.86
SMPD4-202ENST00000409031 KRBA2Q6ZNG9 492 aa20.44■□□□□ 0.86
SMPD4-202ENST00000409031 PLEKHO1Q53GL0 409 aaPredicted RBP20.44■□□□□ 0.86
SMPD4-202ENST00000409031 CPLX3Q8WVH0 158 aa20.44■□□□□ 0.86
SMPD4-202ENST00000409031 TMEM63CQ9P1W3 806 aa20.43■□□□□ 0.86
SMPD4-202ENST00000409031 KLHL10Q6JEL2 608 aa20.43■□□□□ 0.86
SMPD4-202ENST00000409031 NBPF11Q86T75 865 aa20.43■□□□□ 0.86
SMPD4-202ENST00000409031 C17orf53Q8N3J3 647 aaPredicted RBP20.43■□□□□ 0.86
SMPD4-202ENST00000409031 AOPEPQ8N6M6 819 aa20.43■□□□□ 0.86
SMPD4-202ENST00000409031 USO1O60763 962 aaKnown RBP20.43■□□□□ 0.86
SMPD4-202ENST00000409031 TTC39AQ5SRH9 613 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms