RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 MPRIPQ6WCQ1 1025 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 MTMR7Q9Y216 660 aa4.54□□□□□ -1.68
RGPD4-201ENST00000408999 FOXO3O43524 673 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 RARSP54136 660 aaKnown RBP4.53□□□□□ -1.68
RGPD4-201ENST00000408999 TAF7Q15545 349 aaPredicted RBP4.53□□□□□ -1.68
RGPD4-201ENST00000408999 NCBP3Q53F19 620 aaKnown RBP4.53□□□□□ -1.68
RGPD4-201ENST00000408999 BICDL1Q6ZP65 573 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 C17orf53Q8N3J3 647 aaPredicted RBP4.53□□□□□ -1.68
RGPD4-201ENST00000408999 BECN2A8MW95 431 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 TULP2O00295 520 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 RABEP1Q15276 862 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 SAMD1Q6SPF0 538 aaPredicted RBP4.53□□□□□ -1.68
RGPD4-201ENST00000408999 NUTM1Q86Y26 1132 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 NOC3LQ8WTT2 800 aaKnown RBP4.53□□□□□ -1.68
RGPD4-201ENST00000408999 MYD88Q99836 296 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 PCDHB15Q9Y5E8 787 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 ZCCHC11Q5TAX3 1644 aaKnown RBP4.53□□□□□ -1.68
RGPD4-201ENST00000408999 ATP10AO60312 1499 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 INSRP06213 1382 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 NPATQ14207 1427 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 SAFBQ15424 915 aaKnown RBP eCLIP4.53□□□□□ -1.68
RGPD4-201ENST00000408999 BRMS1Q9HCU9 246 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 LCMT1Q9UIC8 334 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 ABCA8O94911 1581 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 ADAMTS2O95450 1211 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 STARD3NLO95772 234 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 SLC3A2P08195 630 aaKnown RBP4.53□□□□□ -1.68
RGPD4-201ENST00000408999 STK11IPQ8N1F8 1099 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 TESK2Q96S53 571 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 HOOK1Q9UJC3 728 aaKnown RBP4.53□□□□□ -1.68
RGPD4-201ENST00000408999 MSH6P52701 1360 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 AKAP9Q99996 3911 aa4.53□□□□□ -1.68
RGPD4-201ENST00000408999 CCDC189A1A4V9 331 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 SART3Q15020 963 aaKnown RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 RRP12Q5JTH9 1297 aaKnown RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 SSH1Q8WYL5 1049 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 SAMD9LQ8IVG5 1584 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 SMARCA5O60264 1052 aaPredicted RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 SF3B2Q13435 895 aaKnown RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 ANKRD24Q8TF21 1146 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 ARID3AQ99856 593 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 IL1RAPL2Q9NP60 686 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 TTC21AQ8NDW8 1320 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 ITGB4P16144 1822 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 TTC37Q6PGP7 1564 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 FAM83GA6ND36 823 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 TPM3P06753 285 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 NEK4P51957 841 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 FKBP4Q02790 459 aaKnown RBP eCLIP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 CCDC47Q96A33 483 aaKnown RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 CCDC85AQ96PX6 553 aaPredicted RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 MPHOSPH8Q99549 860 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 MBIPQ9NS73 344 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 ZMYM3Q14202 1370 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 TMED8Q6PL24 325 aaPredicted RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 RPAP2Q8IXW5 612 aaPredicted RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 XBP1P17861 261 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 FBLN1P23142 703 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 STK3Q13188 491 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 ZSCAN25Q6NSZ9 544 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 SASS6Q6UVJ0 657 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 CWC27Q6UX04 472 aaKnown RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 FAM43AQ8N2R8 423 aa4.52□□□□□ -1.69
RGPD4-201ENST00000408999 PCMTD1Q96MG8 357 aaPredicted RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 YTHDC2Q9H6S0 1430 aaKnown RBP4.52□□□□□ -1.69
RGPD4-201ENST00000408999 XRN1Q8IZH2 1706 aaKnown RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 F6X3S4 739 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 PDIA4P13667 645 aaKnown RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 PDE4CQ08493 712 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 CCDC73Q6ZRK6 1079 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 PREX2Q70Z35 1606 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 CWC22Q9HCG8 908 aaKnown RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 CYP46A1Q9Y6A2 500 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 TRPM2O94759 1503 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 PARD3Q8TEW0 1356 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 PTPRCP08575 1304 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 NCKAP5LQ9HCH0 1330 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 PTCD1O75127 700 aaKnown RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 TPM1P09493 284 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 IGHMBP2P38935 993 aaKnown RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 TSR1Q2NL82 804 aaKnown RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 PPP1R1BQ9UD71 204 aaPredicted RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 RAB11FIP3O75154 756 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 CYP2E1P05181 493 aaPredicted RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 MCM2P49736 904 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 EXOC6BQ9Y2D4 811 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 ZFYVE9O95405 1425 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 A0A1W2PP64 1363 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 CCDC69A6NI79 296 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 K7ELQ4 463 aaPredicted RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 MX1P20591 662 aa4.51□□□□□ -1.69
RGPD4-201ENST00000408999 HMGB2P26583 209 aaKnown RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 IKQ13123 557 aaPredicted RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 LARP1Q6PKG0 1096 aaKnown RBP4.51□□□□□ -1.69
RGPD4-201ENST00000408999 UHRF1BP1Q6BDS2 1440 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 NEDD4P46934 1319 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 SLFN14P0C7P3 912 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 TBC1D2Q9BYX2 928 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 NACAP1Q9BZK3 213 aa4.5□□□□□ -1.69
RGPD4-201ENST00000408999 PDRG1Q9NUG6 133 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms