RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 ATP10DQ9P241 1426 aa12.96□□□□□ -0.33
SNORD88C-201ENST00000408061 ALDH1L1O75891 902 aa12.96□□□□□ -0.33
SNORD88C-201ENST00000408061 SLC39A6Q13433 755 aa12.96□□□□□ -0.33
SNORD88C-201ENST00000408061 DNAAF4Q8WXU2 420 aa12.96□□□□□ -0.33
SNORD88C-201ENST00000408061 SRCIN1Q9C0H9 1055 aa12.96□□□□□ -0.33
SNORD88C-201ENST00000408061 BCL9LQ86UU0 1499 aa12.96□□□□□ -0.34
SNORD88C-201ENST00000408061 ITGB4P16144 1822 aa12.95□□□□□ -0.34
SNORD88C-201ENST00000408061 HMMRO75330 724 aa12.95□□□□□ -0.34
SNORD88C-201ENST00000408061 CCDC9Q9Y3X0 531 aaKnown RBP12.95□□□□□ -0.34
SNORD88C-201ENST00000408061 GNAI2P04899 355 aa12.94□□□□□ -0.34
SNORD88C-201ENST00000408061 PDIA6Q15084 440 aa12.94□□□□□ -0.34
SNORD88C-201ENST00000408061 SLC4A10Q6U841 1118 aa12.94□□□□□ -0.34
SNORD88C-201ENST00000408061 ANKRD44Q8N8A2 993 aa12.94□□□□□ -0.34
SNORD88C-201ENST00000408061 NECTIN2Q92692 538 aa12.94□□□□□ -0.34
SNORD88C-201ENST00000408061 C8orf37Q96NL8 207 aa12.94□□□□□ -0.34
SNORD88C-201ENST00000408061 PHAXQ9H814 394 aaKnown RBP12.94□□□□□ -0.34
SNORD88C-201ENST00000408061 BCL9O00512 1426 aa12.94□□□□□ -0.34
SNORD88C-201ENST00000408061 PI4KAP2A4QPH2 592 aa12.93□□□□□ -0.34
SNORD88C-201ENST00000408061 HSPA1LP34931 641 aa12.93□□□□□ -0.34
SNORD88C-201ENST00000408061 PI4KAP1Q8N8J0 262 aa12.93□□□□□ -0.34
SNORD88C-201ENST00000408061 PIGBQ92521 554 aa12.93□□□□□ -0.34
SNORD88C-201ENST00000408061 USP21Q9UK80 565 aa12.93□□□□□ -0.34
SNORD88C-201ENST00000408061 TOGARAM1Q9Y4F4 1720 aa12.93□□□□□ -0.34
SNORD88C-201ENST00000408061 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
SNORD88C-201ENST00000408061 C5P01031 1676 aa12.93□□□□□ -0.34
SNORD88C-201ENST00000408061 F6X3S4 739 aa12.92□□□□□ -0.34
SNORD88C-201ENST00000408061 STARD3NLO95772 234 aa12.92□□□□□ -0.34
SNORD88C-201ENST00000408061 NEXNQ0ZGT2 675 aa12.92□□□□□ -0.34
SNORD88C-201ENST00000408061 BEND3Q5T5X7 828 aa12.92□□□□□ -0.34
SNORD88C-201ENST00000408061 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
SNORD88C-201ENST00000408061 LINS1Q8NG48 757 aa12.92□□□□□ -0.34
SNORD88C-201ENST00000408061 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
SNORD88C-201ENST00000408061 USP16Q9Y5T5 823 aa12.92□□□□□ -0.34
SNORD88C-201ENST00000408061 ONECUT3O60422 494 aaPredicted RBP12.91□□□□□ -0.34
SNORD88C-201ENST00000408061 ANKRD13DQ6ZTN6 518 aa12.91□□□□□ -0.34
SNORD88C-201ENST00000408061 DCTPP1Q9H773 170 aa12.91□□□□□ -0.34
SNORD88C-201ENST00000408061 UBTFL1P0CB47 393 aaPredicted RBP12.9□□□□□ -0.34
SNORD88C-201ENST00000408061 RIC3Q7Z5B4 369 aa12.9□□□□□ -0.34
SNORD88C-201ENST00000408061 MEIS3Q99687 375 aa12.9□□□□□ -0.34
SNORD88C-201ENST00000408061 USP44Q9H0E7 712 aa12.9□□□□□ -0.34
SNORD88C-201ENST00000408061 ATG3Q9NT62 314 aa12.9□□□□□ -0.34
SNORD88C-201ENST00000408061 TRPC5Q9UL62 973 aaPredicted RBP12.9□□□□□ -0.34
SNORD88C-201ENST00000408061 ADCY9O60503 1353 aa12.9□□□□□ -0.34
SNORD88C-201ENST00000408061 HMGB2P26583 209 aaKnown RBP12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 ATP8B2P98198 1209 aa12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 NUCB1Q02818 461 aa12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 CEP85Q6P2H3 762 aa12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 LRP10Q7Z4F1 713 aa12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 PLBD2Q8NHP8 589 aa12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 METTL22Q9BUU2 404 aaPredicted RBP12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 PDZRN3Q9UPQ7 1066 aa12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 MAP3K2Q9Y2U5 619 aa12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 GLI3P10071 1580 aa12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 KAT6BQ8WYB5 2073 aa12.89□□□□□ -0.35
SNORD88C-201ENST00000408061 UTYO14607 1347 aa12.88□□□□□ -0.35
SNORD88C-201ENST00000408061 PRAMEF22A3QJZ6 481 aa12.88□□□□□ -0.35
SNORD88C-201ENST00000408061 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
SNORD88C-201ENST00000408061 COPS6Q7L5N1 327 aa12.88□□□□□ -0.35
SNORD88C-201ENST00000408061 GJD4Q96KN9 370 aaPredicted RBP12.88□□□□□ -0.35
SNORD88C-201ENST00000408061 ZNF831Q5JPB2 1677 aa12.88□□□□□ -0.35
SNORD88C-201ENST00000408061 PTCD1O75127 700 aaKnown RBP12.87□□□□□ -0.35
SNORD88C-201ENST00000408061 FAM98CQ17RN3 349 aaKnown RBP12.87□□□□□ -0.35
SNORD88C-201ENST00000408061 PROSER3Q2NL68 480 aa12.87□□□□□ -0.35
SNORD88C-201ENST00000408061 SIRT2Q8IXJ6 389 aa12.87□□□□□ -0.35
SNORD88C-201ENST00000408061 XAGE3Q8WTP9 111 aa12.87□□□□□ -0.35
SNORD88C-201ENST00000408061 C9orf78Q9NZ63 289 aaPredicted RBP12.87□□□□□ -0.35
SNORD88C-201ENST00000408061 ASAP1Q9ULH1 1129 aa12.87□□□□□ -0.35
SNORD88C-201ENST00000408061 DOT1LQ8TEK3 1739 aa12.87□□□□□ -0.35
SNORD88C-201ENST00000408061 CICQ96RK0 1608 aaPredicted RBP12.87□□□□□ -0.35
SNORD88C-201ENST00000408061 ATRNO75882 1429 aa12.87□□□□□ -0.35
SNORD88C-201ENST00000408061 THSD7AQ9UPZ6 1657 aa12.86□□□□□ -0.35
SNORD88C-201ENST00000408061 COL15A1P39059 1388 aa12.86□□□□□ -0.35
SNORD88C-201ENST00000408061 EIF5BO60841 1220 aaKnown RBP12.86□□□□□ -0.35
SNORD88C-201ENST00000408061 MYL6BP14649 208 aa12.86□□□□□ -0.35
SNORD88C-201ENST00000408061 MTX1Q13505 466 aa12.86□□□□□ -0.35
SNORD88C-201ENST00000408061 HSP90AB4PQ58FF6 505 aa12.86□□□□□ -0.35
SNORD88C-201ENST00000408061 CHD1LQ86WJ1 897 aa12.86□□□□□ -0.35
SNORD88C-201ENST00000408061 AFF2P51816 1311 aa12.86□□□□□ -0.35
SNORD88C-201ENST00000408061 ANXA1P04083 346 aa12.85□□□□□ -0.35
SNORD88C-201ENST00000408061 AIMP1Q12904 312 aaKnown RBP12.85□□□□□ -0.35
SNORD88C-201ENST00000408061 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
SNORD88C-201ENST00000408061 NBPF26B4DH59 902 aa12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 GRM8O00222 908 aa12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 NBPF14Q5TI25 921 aa12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 NBPF10Q6P3W6 841 aaKnown RBP12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 NPM2Q86SE8 214 aaKnown RBP12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 NBPF15Q8N660 670 aa12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 SYTL4Q96C24 671 aaPredicted RBP12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 BACH2Q9BYV9 841 aa12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 C1orf115Q9H7X2 142 aa12.84□□□□□ -0.35
SNORD88C-201ENST00000408061 NEURL1BA8MQ27 555 aa12.83□□□□□ -0.36
SNORD88C-201ENST00000408061 RGL2O15211 777 aa12.83□□□□□ -0.36
SNORD88C-201ENST00000408061 A1BGP04217 495 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms