RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 BCL11AQ9H165 835 aa20.5■□□□□ 0.87
PIKFYVE-204ENST00000407449 HYPKQ9NX55 129 aa20.5■□□□□ 0.87
PIKFYVE-204ENST00000407449 SALL3Q9BXA9 1300 aa20.49■□□□□ 0.87
PIKFYVE-204ENST00000407449 KDM4FA0A1W2PPD8 638 aa20.49■□□□□ 0.87
PIKFYVE-204ENST00000407449 PDE1AP54750 535 aa20.49■□□□□ 0.87
PIKFYVE-204ENST00000407449 CASC1Q6TDU7 716 aa20.49■□□□□ 0.87
PIKFYVE-204ENST00000407449 SLKQ9H2G2 1235 aaPredicted RBP20.49■□□□□ 0.87
PIKFYVE-204ENST00000407449 SOS2Q07890 1332 aaPredicted RBP20.49■□□□□ 0.87
PIKFYVE-204ENST00000407449 ZNF790Q6PG37 636 aa20.48■□□□□ 0.87
PIKFYVE-204ENST00000407449 ALDH1L1O75891 902 aa20.47■□□□□ 0.87
PIKFYVE-204ENST00000407449 POLA2Q14181 598 aa20.47■□□□□ 0.87
PIKFYVE-204ENST00000407449 KSR2Q6VAB6 950 aa20.47■□□□□ 0.87
PIKFYVE-204ENST00000407449 DCAF5Q96JK2 942 aa20.47■□□□□ 0.87
PIKFYVE-204ENST00000407449 ZNF335Q9H4Z2 1342 aaPredicted RBP20.47■□□□□ 0.87
PIKFYVE-204ENST00000407449 HSP90AB1P08238 724 aaKnown RBP20.46■□□□□ 0.87
PIKFYVE-204ENST00000407449 PROSER3Q2NL68 480 aa20.46■□□□□ 0.87
PIKFYVE-204ENST00000407449 KIF2CQ99661 725 aa20.46■□□□□ 0.87
PIKFYVE-204ENST00000407449 DDX21Q9NR30 783 aaKnown RBP eCLIP20.46■□□□□ 0.87
PIKFYVE-204ENST00000407449 SLAIN2Q9P270 581 aa20.46■□□□□ 0.87
PIKFYVE-204ENST00000407449 PRAMEF22A3QJZ6 481 aa20.45■□□□□ 0.86
PIKFYVE-204ENST00000407449 RAB11FIP3O75154 756 aa20.45■□□□□ 0.86
PIKFYVE-204ENST00000407449 PPP1R42Q7Z4L9 355 aa20.45■□□□□ 0.86
PIKFYVE-204ENST00000407449 NBPF7P0C2Y1 421 aaPredicted RBP20.45■□□□□ 0.86
PIKFYVE-204ENST00000407449 MAP3K2Q9Y2U5 619 aa20.45■□□□□ 0.86
PIKFYVE-204ENST00000407449 NHSL1Q5SYE7 1610 aa20.45■□□□□ 0.86
PIKFYVE-204ENST00000407449 AOX1Q06278 1338 aa20.44■□□□□ 0.86
PIKFYVE-204ENST00000407449 CYP27B1O15528 508 aa20.44■□□□□ 0.86
PIKFYVE-204ENST00000407449 DDX58O95786 925 aaKnown RBP20.44■□□□□ 0.86
PIKFYVE-204ENST00000407449 MX1P20591 662 aa20.44■□□□□ 0.86
PIKFYVE-204ENST00000407449 WDR17Q8IZU2 1322 aa20.44■□□□□ 0.86
PIKFYVE-204ENST00000407449 NFATC2IPQ8NCF5 419 aa20.43■□□□□ 0.86
PIKFYVE-204ENST00000407449 STAP2Q9UGK3 403 aa20.43■□□□□ 0.86
PIKFYVE-204ENST00000407449 LAMB4A4D0S4 1761 aa20.43■□□□□ 0.86
PIKFYVE-204ENST00000407449 FRAT2O75474 233 aaPredicted RBP20.43■□□□□ 0.86
PIKFYVE-204ENST00000407449 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
PIKFYVE-204ENST00000407449 PRDM11Q9NQV5 511 aa20.43■□□□□ 0.86
PIKFYVE-204ENST00000407449 HDAC5Q9UQL6 1122 aa20.43■□□□□ 0.86
PIKFYVE-204ENST00000407449 PDIA6Q15084 440 aa20.42■□□□□ 0.86
PIKFYVE-204ENST00000407449 COL5A2P05997 1499 aaPredicted RBP20.42■□□□□ 0.86
PIKFYVE-204ENST00000407449 SRGAP3O43295 1099 aa20.41■□□□□ 0.86
PIKFYVE-204ENST00000407449 MTX1Q13505 466 aa20.41■□□□□ 0.86
PIKFYVE-204ENST00000407449 SURF6O75683 361 aaKnown RBP20.41■□□□□ 0.86
PIKFYVE-204ENST00000407449 USP26Q9BXU7 913 aa20.41■□□□□ 0.86
PIKFYVE-204ENST00000407449 GLI3P10071 1580 aa20.41■□□□□ 0.86
PIKFYVE-204ENST00000407449 LINS1Q8NG48 757 aa20.4■□□□□ 0.86
PIKFYVE-204ENST00000407449 CHMP5Q9NZZ3 219 aa20.4■□□□□ 0.86
PIKFYVE-204ENST00000407449 REC8O95072 547 aa20.39■□□□□ 0.86
PIKFYVE-204ENST00000407449 HSP90AB4PQ58FF6 505 aa20.39■□□□□ 0.86
PIKFYVE-204ENST00000407449 TTC5Q8N0Z6 440 aa20.39■□□□□ 0.86
PIKFYVE-204ENST00000407449 SPRYD3Q8NCJ5 442 aa20.39■□□□□ 0.85
PIKFYVE-204ENST00000407449 ZNF496Q96IT1 587 aaPredicted RBP20.39■□□□□ 0.85
PIKFYVE-204ENST00000407449 C9orf78Q9NZ63 289 aaPredicted RBP20.39■□□□□ 0.85
PIKFYVE-204ENST00000407449 ERC2O15083 957 aa20.38■□□□□ 0.85
PIKFYVE-204ENST00000407449 SNRPA1P09661 255 aaKnown RBP20.38■□□□□ 0.85
PIKFYVE-204ENST00000407449 RHPN1Q8TCX5 695 aa20.38■□□□□ 0.85
PIKFYVE-204ENST00000407449 KIF1BPQ96EK5 621 aa20.38■□□□□ 0.85
PIKFYVE-204ENST00000407449 UTYO14607 1347 aa20.38■□□□□ 0.85
PIKFYVE-204ENST00000407449 PCDH11XQ9BZA7 1347 aa20.38■□□□□ 0.85
PIKFYVE-204ENST00000407449 PCDH11YQ9BZA8 1340 aa20.38■□□□□ 0.85
PIKFYVE-204ENST00000407449 RABEP1Q15276 862 aa20.37■□□□□ 0.85
PIKFYVE-204ENST00000407449 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
PIKFYVE-204ENST00000407449 CABP4P57796 275 aa20.37■□□□□ 0.85
PIKFYVE-204ENST00000407449 TSHZ3Q63HK5 1081 aa20.37■□□□□ 0.85
PIKFYVE-204ENST00000407449 TOM1L2Q6ZVM7 507 aa20.37■□□□□ 0.85
PIKFYVE-204ENST00000407449 SHANK3Q9BYB0 1731 aa20.37■□□□□ 0.85
PIKFYVE-204ENST00000407449 CWF19L2Q2TBE0 894 aaKnown RBP20.36■□□□□ 0.85
PIKFYVE-204ENST00000407449 LARP1Q6PKG0 1096 aaKnown RBP20.36■□□□□ 0.85
PIKFYVE-204ENST00000407449 IL1RAPL2Q9NP60 686 aa20.36■□□□□ 0.85
PIKFYVE-204ENST00000407449 UBR2Q8IWV8 1755 aa20.36■□□□□ 0.85
PIKFYVE-204ENST00000407449 AK9Q5TCS8 1911 aa20.36■□□□□ 0.85
PIKFYVE-204ENST00000407449 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
PIKFYVE-204ENST00000407449 K7ELQ4 463 aaPredicted RBP20.35■□□□□ 0.85
PIKFYVE-204ENST00000407449 AIMP1Q12904 312 aaKnown RBP20.35■□□□□ 0.85
PIKFYVE-204ENST00000407449 GRM8O00222 908 aa20.35■□□□□ 0.85
PIKFYVE-204ENST00000407449 RIC3Q7Z5B4 369 aa20.35■□□□□ 0.85
PIKFYVE-204ENST00000407449 ZCRB1Q8TBF4 217 aaKnown RBP20.35■□□□□ 0.85
PIKFYVE-204ENST00000407449 DDIT3P35638 169 aa20.34■□□□□ 0.85
PIKFYVE-204ENST00000407449 XAGE3Q8WTP9 111 aa20.34■□□□□ 0.85
PIKFYVE-204ENST00000407449 RBM42Q9BTD8 480 aaKnown RBP20.34■□□□□ 0.85
PIKFYVE-204ENST00000407449 CARD10Q9BWT7 1032 aa20.34■□□□□ 0.85
PIKFYVE-204ENST00000407449 ARFGEF2Q9Y6D5 1785 aa20.33■□□□□ 0.85
PIKFYVE-204ENST00000407449 MYL6BP14649 208 aa20.33■□□□□ 0.85
PIKFYVE-204ENST00000407449 CD2BP2O95400 341 aaKnown RBP20.33■□□□□ 0.84
PIKFYVE-204ENST00000407449 NEXNQ0ZGT2 675 aa20.33■□□□□ 0.84
PIKFYVE-204ENST00000407449 LRP10Q7Z4F1 713 aa20.33■□□□□ 0.84
PIKFYVE-204ENST00000407449 NUTM1Q86Y26 1132 aa20.33■□□□□ 0.84
PIKFYVE-204ENST00000407449 ESYT1Q9BSJ8 1104 aa20.33■□□□□ 0.84
PIKFYVE-204ENST00000407449 CIZ1Q9ULV3 898 aaPredicted RBP20.33■□□□□ 0.84
PIKFYVE-204ENST00000407449 AFDNP55196 1824 aaKnown RBP20.32■□□□□ 0.84
PIKFYVE-204ENST00000407449 TRIM6-TRIM34B2RNG4 842 aa20.32■□□□□ 0.84
PIKFYVE-204ENST00000407449 USP16Q9Y5T5 823 aa20.32■□□□□ 0.84
PIKFYVE-204ENST00000407449 IGKV5-2P06315 115 aa20.31■□□□□ 0.84
PIKFYVE-204ENST00000407449 IL2RBP14784 551 aa20.31■□□□□ 0.84
PIKFYVE-204ENST00000407449 CHMLP26374 656 aa20.31■□□□□ 0.84
PIKFYVE-204ENST00000407449 COPS6Q7L5N1 327 aa20.31■□□□□ 0.84
PIKFYVE-204ENST00000407449 ERC1Q8IUD2 1116 aa20.31■□□□□ 0.84
PIKFYVE-204ENST00000407449 RILPL2Q969X0 211 aa20.31■□□□□ 0.84
PIKFYVE-204ENST00000407449 SUCLG2Q96I99 432 aa20.31■□□□□ 0.84
PIKFYVE-204ENST00000407449 METTL22Q9BUU2 404 aaPredicted RBP20.31■□□□□ 0.84
PIKFYVE-204ENST00000407449 USP42Q9H9J4 1324 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms