RNA–Protein interactions for RNA: ENST00000405489.7

ATRAID-202, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,059 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-202ENST00000405489 GOLGB1Q14789 3259 aaKnown RBP17.5■□□□□ 0.39
ATRAID-202ENST00000405489 UTRNP46939 3433 aa17.5■□□□□ 0.39
ATRAID-202ENST00000405489 KCNQ3O43525 872 aa17.5■□□□□ 0.39
ATRAID-202ENST00000405489 MMP10P09238 476 aa17.5■□□□□ 0.39
ATRAID-202ENST00000405489 NLGN2Q8NFZ4 835 aa17.5■□□□□ 0.39
ATRAID-202ENST00000405489 ZBTB1Q9Y2K1 713 aa17.49■□□□□ 0.39
ATRAID-202ENST00000405489 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
ATRAID-202ENST00000405489 ZPR1O75312 459 aa17.47■□□□□ 0.39
ATRAID-202ENST00000405489 EIF5P55010 431 aaKnown RBP17.47■□□□□ 0.39
ATRAID-202ENST00000405489 PNISRQ8TF01 805 aaKnown RBP17.47■□□□□ 0.39
ATRAID-202ENST00000405489 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
ATRAID-202ENST00000405489 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
ATRAID-202ENST00000405489 COL15A1P39059 1388 aa17.47■□□□□ 0.39
ATRAID-202ENST00000405489 LAMB4A4D0S4 1761 aa17.46■□□□□ 0.39
ATRAID-202ENST00000405489 SNRPA1P09661 255 aaKnown RBP17.46■□□□□ 0.39
ATRAID-202ENST00000405489 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.39
ATRAID-202ENST00000405489 RIPK4P57078 832 aa17.46■□□□□ 0.39
ATRAID-202ENST00000405489 FKBP8Q14318 412 aa17.46■□□□□ 0.39
ATRAID-202ENST00000405489 ADAMTS8Q9UP79 889 aa17.46■□□□□ 0.39
ATRAID-202ENST00000405489 AFDNP55196 1824 aaKnown RBP17.46■□□□□ 0.39
ATRAID-202ENST00000405489 KIAA1551Q9HCM1 1747 aa17.46■□□□□ 0.39
ATRAID-202ENST00000405489 TMPOP42166 694 aaKnown RBP17.45■□□□□ 0.38
ATRAID-202ENST00000405489 GPR162Q16538 588 aa17.45■□□□□ 0.38
ATRAID-202ENST00000405489 USPL1Q5W0Q7 1092 aa17.45■□□□□ 0.38
ATRAID-202ENST00000405489 RUNDC1Q96C34 613 aa17.45■□□□□ 0.38
ATRAID-202ENST00000405489 USP16Q9Y5T5 823 aa17.45■□□□□ 0.38
ATRAID-202ENST00000405489 PARP3Q9Y6F1 533 aa17.45■□□□□ 0.38
ATRAID-202ENST00000405489 N4BP2Q86UW6 1770 aaPredicted RBP17.45■□□□□ 0.38
ATRAID-202ENST00000405489 A0A087WZG4 1122 aa17.44■□□□□ 0.38
ATRAID-202ENST00000405489 TM4SF1P30408 202 aa17.44■□□□□ 0.38
ATRAID-202ENST00000405489 IL6STP40189 918 aaPredicted RBP17.44■□□□□ 0.38
ATRAID-202ENST00000405489 MIS18AQ9NYP9 233 aa17.44■□□□□ 0.38
ATRAID-202ENST00000405489 BRCA1P38398 1863 aaKnown RBP17.44■□□□□ 0.38
ATRAID-202ENST00000405489 A1BGP04217 495 aa17.43■□□□□ 0.38
ATRAID-202ENST00000405489 LMOD3Q0VAK6 560 aa17.43■□□□□ 0.38
ATRAID-202ENST00000405489 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
ATRAID-202ENST00000405489 NRXN2Q9P2S2 1712 aa17.43■□□□□ 0.38
ATRAID-202ENST00000405489 SCN7AQ01118 1682 aa17.42■□□□□ 0.38
ATRAID-202ENST00000405489 CCDC146Q8IYE0 955 aa17.42■□□□□ 0.38
ATRAID-202ENST00000405489 BCORQ6W2J9 1755 aa17.41■□□□□ 0.38
ATRAID-202ENST00000405489 C10orf71Q711Q0 1435 aa17.41■□□□□ 0.38
ATRAID-202ENST00000405489 PRAMEF22A3QJZ6 481 aa17.41■□□□□ 0.38
ATRAID-202ENST00000405489 TGFB2P61812 414 aa17.41■□□□□ 0.38
ATRAID-202ENST00000405489 BCL2L12Q9HB09 334 aa17.41■□□□□ 0.38
ATRAID-202ENST00000405489 BABAM1Q9NWV8 329 aa17.41■□□□□ 0.38
ATRAID-202ENST00000405489 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
ATRAID-202ENST00000405489 YBX3P16989 372 aaKnown RBP eCLIP17.4■□□□□ 0.383e-9■■■■□ 20
ATRAID-202ENST00000405489 YY1P25490 414 aa17.4■□□□□ 0.38
ATRAID-202ENST00000405489 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
ATRAID-202ENST00000405489 DDR1Q08345 913 aa17.4■□□□□ 0.38
ATRAID-202ENST00000405489 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
ATRAID-202ENST00000405489 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.37
ATRAID-202ENST00000405489 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.37
ATRAID-202ENST00000405489 NPM2Q86SE8 214 aaKnown RBP17.39■□□□□ 0.37
ATRAID-202ENST00000405489 NFIXQ14938 502 aa17.38■□□□□ 0.37
ATRAID-202ENST00000405489 NEUROD2Q15784 382 aa17.38■□□□□ 0.37
ATRAID-202ENST00000405489 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
ATRAID-202ENST00000405489 TBC1D2BQ9UPU7 963 aa17.38■□□□□ 0.37
ATRAID-202ENST00000405489 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
ATRAID-202ENST00000405489 PXDNLA1KZ92 1463 aa17.37■□□□□ 0.37
ATRAID-202ENST00000405489 NBPF26B4DH59 902 aa17.37■□□□□ 0.37
ATRAID-202ENST00000405489 NBPF10Q6P3W6 841 aaKnown RBP17.37■□□□□ 0.37
ATRAID-202ENST00000405489 NBPF15Q8N660 670 aa17.37■□□□□ 0.37
ATRAID-202ENST00000405489 ZNF330Q9Y3S2 320 aaPredicted RBP17.37■□□□□ 0.37
ATRAID-202ENST00000405489 ARFGEF1Q9Y6D6 1849 aa17.37■□□□□ 0.37
ATRAID-202ENST00000405489 NUP98P52948 1817 aa17.36■□□□□ 0.37
ATRAID-202ENST00000405489 ANP32CO43423 234 aa17.36■□□□□ 0.37
ATRAID-202ENST00000405489 CCDC184Q52MB2 194 aa17.36■□□□□ 0.37
ATRAID-202ENST00000405489 TSPYL4Q9UJ04 414 aa17.36■□□□□ 0.37
ATRAID-202ENST00000405489 A0A0G2JLW4 131 aa17.35■□□□□ 0.37
ATRAID-202ENST00000405489 RGL2O15211 777 aa17.35■□□□□ 0.37
ATRAID-202ENST00000405489 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
ATRAID-202ENST00000405489 DZIP3Q86Y13 1208 aaKnown RBP17.35■□□□□ 0.37
ATRAID-202ENST00000405489 DLEC1Q9Y238 1755 aa17.35■□□□□ 0.37
ATRAID-202ENST00000405489 CHL1O00533 1208 aa17.34■□□□□ 0.37
ATRAID-202ENST00000405489 SERPINB2P05120 415 aa17.34■□□□□ 0.37
ATRAID-202ENST00000405489 PIP4K2AP48426 406 aaPredicted RBP17.34■□□□□ 0.37
ATRAID-202ENST00000405489 CLEC4GQ6UXB4 293 aa17.34■□□□□ 0.37
ATRAID-202ENST00000405489 ANKRD31Q8N7Z5 1873 aa17.33■□□□□ 0.37
ATRAID-202ENST00000405489 APAF1O14727 1248 aa17.33■□□□□ 0.36
ATRAID-202ENST00000405489 DPEP1P16444 411 aa17.33■□□□□ 0.36
ATRAID-202ENST00000405489 KCNA3P22001 575 aa17.33■□□□□ 0.36
ATRAID-202ENST00000405489 TBC1D9BQ66K14 1250 aa17.33■□□□□ 0.36
ATRAID-202ENST00000405489 ERBB4Q15303 1308 aa17.31■□□□□ 0.36
ATRAID-202ENST00000405489 BICDL1Q6ZP65 573 aa17.31■□□□□ 0.36
ATRAID-202ENST00000405489 SETDB2Q96T68 719 aa17.31■□□□□ 0.36
ATRAID-202ENST00000405489 CARMIL3Q8ND23 1372 aa17.3■□□□□ 0.36
ATRAID-202ENST00000405489 CFAP44Q96MT7 982 aa17.3■□□□□ 0.36
ATRAID-202ENST00000405489 PIM2Q9P1W9 311 aa17.3■□□□□ 0.36
ATRAID-202ENST00000405489 ZNF652Q9Y2D9 606 aa17.3■□□□□ 0.36
ATRAID-202ENST00000405489 MRS2Q9HD23 443 aa17.29■□□□□ 0.36
ATRAID-202ENST00000405489 WWC3Q9ULE0 1092 aa17.29■□□□□ 0.36
ATRAID-202ENST00000405489 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
ATRAID-202ENST00000405489 ERVV-1B6SEH8 477 aa17.27■□□□□ 0.36
ATRAID-202ENST00000405489 CHRNA5P30532 468 aa17.27■□□□□ 0.36
ATRAID-202ENST00000405489 CALD1Q05682 793 aaKnown RBP17.27■□□□□ 0.36
ATRAID-202ENST00000405489 PRR5LQ6MZQ0 368 aa17.27■□□□□ 0.36
ATRAID-202ENST00000405489 BRIP1Q9BX63 1249 aa17.27■□□□□ 0.36
ATRAID-202ENST00000405489 BCS1LQ9Y276 419 aa17.27■□□□□ 0.36
ATRAID-202ENST00000405489 SBF1O95248 1867 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms