RNA–Protein interactions for RNA: ENST00000404944.3

HIP1-202, Transcript of huntingtin interacting protein 1, humanhuman

TSL 5

Gene HIP1, Length 728 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1-202ENST00000404944 ATG3Q9NT62 314 aa20.45■□□□□ 0.86
HIP1-202ENST00000404944 SALL2Q9Y467 1007 aaPredicted RBP20.45■□□□□ 0.86
HIP1-202ENST00000404944 TAF1LQ8IZX4 1826 aa20.45■□□□□ 0.86
HIP1-202ENST00000404944 E9PSI1 815 aa20.44■□□□□ 0.86
HIP1-202ENST00000404944 YTHDC1Q96MU7 727 aaKnown RBP20.44■□□□□ 0.86
HIP1-202ENST00000404944 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
HIP1-202ENST00000404944 SMARCC1Q92922 1105 aaPredicted RBP20.43■□□□□ 0.86
HIP1-202ENST00000404944 CFAP44Q96MT7 982 aa20.43■□□□□ 0.86
HIP1-202ENST00000404944 RBM42Q9BTD8 480 aaKnown RBP20.43■□□□□ 0.86
HIP1-202ENST00000404944 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
HIP1-202ENST00000404944 IFT57Q9NWB7 429 aa20.43■□□□□ 0.86
HIP1-202ENST00000404944 MRC1P22897 1456 aa20.42■□□□□ 0.86
HIP1-202ENST00000404944 PTCD1O75127 700 aaKnown RBP20.41■□□□□ 0.86
HIP1-202ENST00000404944 SIPA1L3O60292 1781 aaPredicted RBP20.41■□□□□ 0.86
HIP1-202ENST00000404944 KIF3CO14782 793 aa20.4■□□□□ 0.86
HIP1-202ENST00000404944 CHL1O00533 1208 aa20.39■□□□□ 0.85
HIP1-202ENST00000404944 ZNF853P0CG23 659 aa20.39■□□□□ 0.85
HIP1-202ENST00000404944 SLFN5Q08AF3 891 aa20.39■□□□□ 0.85
HIP1-202ENST00000404944 UBR3Q6ZT12 1888 aa20.39■□□□□ 0.85
HIP1-202ENST00000404944 BTBD11A6QL63 1104 aa20.38■□□□□ 0.85
HIP1-202ENST00000404944 GNPATO15228 680 aa20.38■□□□□ 0.85
HIP1-202ENST00000404944 SSFA2P28290 1259 aa20.38■□□□□ 0.85
HIP1-202ENST00000404944 LINC00116Q8NCU8 138 aa20.38■□□□□ 0.85
HIP1-202ENST00000404944 CHMP4AQ9BY43 222 aa20.38■□□□□ 0.85
HIP1-202ENST00000404944 MIS18AQ9NYP9 233 aa20.38■□□□□ 0.85
HIP1-202ENST00000404944 LOC102724428A0A0B4J2F2 783 aa20.37■□□□□ 0.85
HIP1-202ENST00000404944 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
HIP1-202ENST00000404944 SIK1P57059 783 aa20.37■□□□□ 0.85
HIP1-202ENST00000404944 TRMT2AQ8IZ69 625 aaKnown RBP20.37■□□□□ 0.85
HIP1-202ENST00000404944 KCNQ3O43525 872 aa20.36■□□□□ 0.85
HIP1-202ENST00000404944 APLP1P51693 650 aa20.36■□□□□ 0.85
HIP1-202ENST00000404944 TTC5Q8N0Z6 440 aa20.36■□□□□ 0.85
HIP1-202ENST00000404944 SOS1Q07889 1333 aaPredicted RBP20.35■□□□□ 0.85
HIP1-202ENST00000404944 MMP10P09238 476 aa20.35■□□□□ 0.85
HIP1-202ENST00000404944 ITPK1Q13572 414 aa20.34■□□□□ 0.85
HIP1-202ENST00000404944 SLC4A9Q96Q91 983 aa20.34■□□□□ 0.85
HIP1-202ENST00000404944 TSPYL4Q9UJ04 414 aa20.34■□□□□ 0.85
HIP1-202ENST00000404944 BCS1LQ9Y276 419 aa20.34■□□□□ 0.85
HIP1-202ENST00000404944 LAS1LQ9Y4W2 734 aaKnown RBP20.34■□□□□ 0.85
HIP1-202ENST00000404944 PXDNLA1KZ92 1463 aa20.33■□□□□ 0.85
HIP1-202ENST00000404944 CT47B1P0C2W7 299 aaPredicted RBP20.33■□□□□ 0.85
HIP1-202ENST00000404944 ZNF790Q6PG37 636 aa20.33■□□□□ 0.85
HIP1-202ENST00000404944 CICQ96RK0 1608 aaPredicted RBP20.33■□□□□ 0.84
HIP1-202ENST00000404944 KCPQ6ZWJ8 1503 aa20.32■□□□□ 0.84
HIP1-202ENST00000404944 UBR2Q8IWV8 1755 aa20.31■□□□□ 0.84
HIP1-202ENST00000404944 A0A0G2JLW4 131 aa20.3■□□□□ 0.84
HIP1-202ENST00000404944 TOMM70O94826 608 aa20.3■□□□□ 0.84
HIP1-202ENST00000404944 ARHGAP27Q6ZUM4 889 aa20.3■□□□□ 0.84
HIP1-202ENST00000404944 ZNF428Q96B54 188 aa20.3■□□□□ 0.84
HIP1-202ENST00000404944 ZNF496Q96IT1 587 aaPredicted RBP20.3■□□□□ 0.84
HIP1-202ENST00000404944 MBIPQ9NS73 344 aa20.3■□□□□ 0.84
HIP1-202ENST00000404944 TJP1Q07157 1748 aa20.3■□□□□ 0.84
HIP1-202ENST00000404944 DUSP27Q5VZP5 1158 aa20.29■□□□□ 0.84
HIP1-202ENST00000404944 DNAJC10Q8IXB1 793 aa20.29■□□□□ 0.84
HIP1-202ENST00000404944 CDCA7LQ96GN5 454 aa20.29■□□□□ 0.84
HIP1-202ENST00000404944 NMRK2Q9NPI5 230 aa20.29■□□□□ 0.84
HIP1-202ENST00000404944 FANCIQ9NVI1 1328 aa20.28■□□□□ 0.84
HIP1-202ENST00000404944 HOXB7P09629 217 aa20.28■□□□□ 0.84
HIP1-202ENST00000404944 KDM3BQ7LBC6 1761 aa20.28■□□□□ 0.84
HIP1-202ENST00000404944 N4BP2Q86UW6 1770 aaPredicted RBP20.28■□□□□ 0.84
HIP1-202ENST00000404944 CENPBP07199 599 aaPredicted RBP20.27■□□□□ 0.84
HIP1-202ENST00000404944 VSIG10Q8N0Z9 540 aa20.27■□□□□ 0.84
HIP1-202ENST00000404944 FMNL2Q96PY5 1086 aa20.27■□□□□ 0.84
HIP1-202ENST00000404944 TEX13AQ9BXU3 409 aaPredicted RBP20.27■□□□□ 0.84
HIP1-202ENST00000404944 SPINK5Q9NQ38 1064 aaPredicted RBP20.27■□□□□ 0.84
HIP1-202ENST00000404944 TGFB2P61812 414 aa20.26■□□□□ 0.83
HIP1-202ENST00000404944 C16orf71Q8IYS4 520 aaPredicted RBP20.26■□□□□ 0.83
HIP1-202ENST00000404944 COL5A3P25940 1745 aaPredicted RBP20.26■□□□□ 0.83
HIP1-202ENST00000404944 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
HIP1-202ENST00000404944 HEG1Q9ULI3 1381 aa20.25■□□□□ 0.83
HIP1-202ENST00000404944 EIF4A1P60842 406 aaKnown RBP20.25■□□□□ 0.83
HIP1-202ENST00000404944 TRAPPC3LQ5T215 181 aa20.25■□□□□ 0.83
HIP1-202ENST00000404944 DNAJC5GQ8N7S2 189 aa20.25■□□□□ 0.83
HIP1-202ENST00000404944 RTCBQ9Y3I0 505 aaKnown RBP20.25■□□□□ 0.83
HIP1-202ENST00000404944 C10orf71Q711Q0 1435 aa20.25■□□□□ 0.83
HIP1-202ENST00000404944 PRAMEF22A3QJZ6 481 aa20.24■□□□□ 0.83
HIP1-202ENST00000404944 DPEP1P16444 411 aa20.24■□□□□ 0.83
HIP1-202ENST00000404944 HTRA3P83110 453 aa20.24■□□□□ 0.83
HIP1-202ENST00000404944 TSR2Q969E8 191 aaKnown RBP20.24■□□□□ 0.83
HIP1-202ENST00000404944 CCDC87Q9NVE4 849 aa20.24■□□□□ 0.83
HIP1-202ENST00000404944 KIAA1551Q9HCM1 1747 aa20.24■□□□□ 0.83
HIP1-202ENST00000404944 SNRPA1P09661 255 aaKnown RBP20.23■□□□□ 0.83
HIP1-202ENST00000404944 NLGN1Q8N2Q7 840 aa20.23■□□□□ 0.83
HIP1-202ENST00000404944 KIF13BQ9NQT8 1826 aa20.23■□□□□ 0.83
HIP1-202ENST00000404944 CRKLP46109 303 aaKnown RBP20.22■□□□□ 0.83
HIP1-202ENST00000404944 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
HIP1-202ENST00000404944 C9orf131Q5VYM1 1079 aa20.22■□□□□ 0.83
HIP1-202ENST00000404944 PARP3Q9Y6F1 533 aa20.22■□□□□ 0.83
HIP1-202ENST00000404944 CAPN15O75808 1086 aa20.21■□□□□ 0.83
HIP1-202ENST00000404944 CYP19A1P11511 503 aaPredicted RBP20.21■□□□□ 0.83
HIP1-202ENST00000404944 PCNTO95613 3336 aa20.21■□□□□ 0.83
HIP1-202ENST00000404944 WDR90Q96KV7 1748 aa20.21■□□□□ 0.83
HIP1-202ENST00000404944 RFC4P35249 363 aa20.2■□□□□ 0.82
HIP1-202ENST00000404944 TWISTNBQ3B726 338 aaPredicted RBP20.2■□□□□ 0.82
HIP1-202ENST00000404944 RBM46Q8TBY0 533 aaKnown RBP20.2■□□□□ 0.82
HIP1-202ENST00000404944 ARHGEF1Q92888 912 aaKnown RBP20.2■□□□□ 0.82
HIP1-202ENST00000404944 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
HIP1-202ENST00000404944 MYH14Q7Z406 1995 aaKnown RBP20.19■□□□□ 0.82
HIP1-202ENST00000404944 C4AP0C0L4 1744 aa20.19■□□□□ 0.82
HIP1-202ENST00000404944 STARD3NLO95772 234 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms