RNA–Protein interactions for RNA: ENST00000404436.2

CHI3L1-202, Transcript of chitinase 3 like 1, humanhuman

TSL 2

Gene CHI3L1, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1-202ENST00000404436 HEG1Q9ULI3 1381 aa21.55■■□□□ 1.04
CHI3L1-202ENST00000404436 SOS1Q07889 1333 aaPredicted RBP21.55■■□□□ 1.04
CHI3L1-202ENST00000404436 USP42Q9H9J4 1324 aaKnown RBP21.54■■□□□ 1.04
CHI3L1-202ENST00000404436 ZPR1O75312 459 aa21.53■■□□□ 1.04
CHI3L1-202ENST00000404436 NFE2L2Q16236 605 aa21.53■■□□□ 1.04
CHI3L1-202ENST00000404436 MAPK8IP3Q9UPT6 1336 aa21.53■■□□□ 1.04
CHI3L1-202ENST00000404436 CANXP27824 592 aaKnown RBP21.52■■□□□ 1.04
CHI3L1-202ENST00000404436 PARP3Q9Y6F1 533 aa21.52■■□□□ 1.04
CHI3L1-202ENST00000404436 FKBP8Q14318 412 aa21.51■■□□□ 1.03
CHI3L1-202ENST00000404436 TAF7Q15545 349 aaPredicted RBP21.51■■□□□ 1.03
CHI3L1-202ENST00000404436 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
CHI3L1-202ENST00000404436 USPL1Q5W0Q7 1092 aa21.5■■□□□ 1.03
CHI3L1-202ENST00000404436 COL15A1P39059 1388 aa21.49■■□□□ 1.03
CHI3L1-202ENST00000404436 NARFQ9UHQ1 456 aa21.49■■□□□ 1.03
CHI3L1-202ENST00000404436 YBX3P16989 372 aaKnown RBP eCLIP21.48■■□□□ 1.03
CHI3L1-202ENST00000404436 EIF5P55010 431 aaKnown RBP21.48■■□□□ 1.03
CHI3L1-202ENST00000404436 MIS18AQ9NYP9 233 aa21.48■■□□□ 1.03
CHI3L1-202ENST00000404436 GRIN3BO60391 1043 aa21.47■■□□□ 1.03
CHI3L1-202ENST00000404436 A1BGP04217 495 aa21.47■■□□□ 1.03
CHI3L1-202ENST00000404436 USP16Q9Y5T5 823 aa21.47■■□□□ 1.03
CHI3L1-202ENST00000404436 KIF13BQ9NQT8 1826 aa21.47■■□□□ 1.03
CHI3L1-202ENST00000404436 SNRPA1P09661 255 aaKnown RBP21.46■■□□□ 1.03
CHI3L1-202ENST00000404436 TM4SF1P30408 202 aa21.46■■□□□ 1.03
CHI3L1-202ENST00000404436 WDR43Q15061 677 aaKnown RBP eCLIP21.46■■□□□ 1.03
CHI3L1-202ENST00000404436 A0A087WZG4 1122 aa21.45■■□□□ 1.02
CHI3L1-202ENST00000404436 PRAMEF22A3QJZ6 481 aa21.45■■□□□ 1.02
CHI3L1-202ENST00000404436 RIPK4P57078 832 aa21.45■■□□□ 1.02
CHI3L1-202ENST00000404436 DDR1Q08345 913 aa21.45■■□□□ 1.02
CHI3L1-202ENST00000404436 THUMPD2Q9BTF0 503 aaKnown RBP21.45■■□□□ 1.02
CHI3L1-202ENST00000404436 WWC3Q9ULE0 1092 aa21.45■■□□□ 1.02
CHI3L1-202ENST00000404436 ZNF330Q9Y3S2 320 aaPredicted RBP21.45■■□□□ 1.02
CHI3L1-202ENST00000404436 IL6STP40189 918 aaPredicted RBP21.44■■□□□ 1.02
CHI3L1-202ENST00000404436 TGFB2P61812 414 aa21.44■■□□□ 1.02
CHI3L1-202ENST00000404436 PNISRQ8TF01 805 aaKnown RBP21.44■■□□□ 1.02
CHI3L1-202ENST00000404436 N4BP2Q86UW6 1770 aaPredicted RBP21.43■■□□□ 1.02
CHI3L1-202ENST00000404436 ZNF316A6NFI3 1004 aaPredicted RBP21.43■■□□□ 1.02
CHI3L1-202ENST00000404436 POLRMTO00411 1230 aaKnown RBP21.43■■□□□ 1.02
CHI3L1-202ENST00000404436 TMPOP42166 694 aaKnown RBP21.43■■□□□ 1.02
CHI3L1-202ENST00000404436 NPM2Q86SE8 214 aaKnown RBP21.43■■□□□ 1.02
CHI3L1-202ENST00000404436 CCDC146Q8IYE0 955 aa21.43■■□□□ 1.02
CHI3L1-202ENST00000404436 BCL2L12Q9HB09 334 aa21.43■■□□□ 1.02
CHI3L1-202ENST00000404436 A0A0G2JLW4 131 aa21.42■■□□□ 1.02
CHI3L1-202ENST00000404436 C10orf71Q711Q0 1435 aa21.42■■□□□ 1.02
CHI3L1-202ENST00000404436 ADAMTS8Q9UP79 889 aa21.42■■□□□ 1.02
CHI3L1-202ENST00000404436 TBC1D2BQ9UPU7 963 aa21.42■■□□□ 1.02
CHI3L1-202ENST00000404436 NFIXQ14938 502 aa21.41■■□□□ 1.02
CHI3L1-202ENST00000404436 PIP4K2AP48426 406 aaPredicted RBP21.4■■□□□ 1.02
CHI3L1-202ENST00000404436 NEUROD2Q15784 382 aa21.4■■□□□ 1.02
CHI3L1-202ENST00000404436 RUNDC1Q96C34 613 aa21.4■■□□□ 1.02
CHI3L1-202ENST00000404436 PXDNLA1KZ92 1463 aa21.39■■□□□ 1.02
CHI3L1-202ENST00000404436 AFDNP55196 1824 aaKnown RBP21.39■■□□□ 1.02
CHI3L1-202ENST00000404436 KDM3BQ7LBC6 1761 aa21.39■■□□□ 1.01
CHI3L1-202ENST00000404436 KIAA1551Q9HCM1 1747 aa21.39■■□□□ 1.01
CHI3L1-202ENST00000404436 DPEP1P16444 411 aa21.39■■□□□ 1.01
CHI3L1-202ENST00000404436 RRP7AQ9Y3A4 280 aaKnown RBP21.39■■□□□ 1.01
CHI3L1-202ENST00000404436 EIF4A1P60842 406 aaKnown RBP21.38■■□□□ 1.01
CHI3L1-202ENST00000404436 LMOD3Q0VAK6 560 aa21.38■■□□□ 1.01
CHI3L1-202ENST00000404436 BICDL1Q6ZP65 573 aa21.38■■□□□ 1.01
CHI3L1-202ENST00000404436 SERPINB2P05120 415 aa21.37■■□□□ 1.01
CHI3L1-202ENST00000404436 GIGYF1O75420 1035 aaPredicted RBP21.36■■□□□ 1.01
CHI3L1-202ENST00000404436 DZIP3Q86Y13 1208 aaKnown RBP21.36■■□□□ 1.01
CHI3L1-202ENST00000404436 NBPF26B4DH59 902 aa21.35■■□□□ 1.01
CHI3L1-202ENST00000404436 CAMTA2O94983 1202 aa21.35■■□□□ 1.01
CHI3L1-202ENST00000404436 KCNA3P22001 575 aa21.35■■□□□ 1.01
CHI3L1-202ENST00000404436 TBC1D9BQ66K14 1250 aa21.35■■□□□ 1.01
CHI3L1-202ENST00000404436 NBPF10Q6P3W6 841 aaKnown RBP21.35■■□□□ 1.01
CHI3L1-202ENST00000404436 NBPF15Q8N660 670 aa21.35■■□□□ 1.01
CHI3L1-202ENST00000404436 ZNF784Q8NCA9 323 aaPredicted RBP21.35■■□□□ 1.01
CHI3L1-202ENST00000404436 TSPYL4Q9UJ04 414 aa21.35■■□□□ 1.01
CHI3L1-202ENST00000404436 BCS1LQ9Y276 419 aa21.35■■□□□ 1.01
CHI3L1-202ENST00000404436 BRCA1P38398 1863 aaKnown RBP21.34■■□□□ 1.01
CHI3L1-202ENST00000404436 SCN7AQ01118 1682 aa21.33■■□□□ 1
CHI3L1-202ENST00000404436 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
CHI3L1-202ENST00000404436 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
CHI3L1-202ENST00000404436 PIM2Q9P1W9 311 aa21.32■■□□□ 1
CHI3L1-202ENST00000404436 TRIM35Q9UPQ4 493 aa21.32■■□□□ 1
CHI3L1-202ENST00000404436 LAMB4A4D0S4 1761 aa21.32■■□□□ 1
CHI3L1-202ENST00000404436 CHRNA5P30532 468 aa21.31■■□□□ 1
CHI3L1-202ENST00000404436 SETDB2Q96T68 719 aa21.31■■□□□ 1
CHI3L1-202ENST00000404436 CLEC4GQ6UXB4 293 aa21.3■■□□□ 1
CHI3L1-202ENST00000404436 BCORQ6W2J9 1755 aa21.3■■□□□ 1
CHI3L1-202ENST00000404436 CCDC184Q52MB2 194 aa21.29■■□□□ 1
CHI3L1-202ENST00000404436 NGEFQ8N5V2 710 aa21.29■■□□□ 1
CHI3L1-202ENST00000404436 CARMIL3Q8ND23 1372 aa21.28■■□□□ 1
CHI3L1-202ENST00000404436 DALRD3Q5D0E6 543 aaKnown RBP21.28■■□□□ 1
CHI3L1-202ENST00000404436 ZNF652Q9Y2D9 606 aa21.28■■□□□ 1
CHI3L1-202ENST00000404436 LAS1LQ9Y4W2 734 aaKnown RBP21.28■■□□□ 1
CHI3L1-202ENST00000404436 ARFGEF1Q9Y6D6 1849 aa21.27■■□□□ 1
CHI3L1-202ENST00000404436 CHL1O00533 1208 aa21.27■■□□□ 1
CHI3L1-202ENST00000404436 APAF1O14727 1248 aa21.27■■□□□ 1
CHI3L1-202ENST00000404436 ANP32CO43423 234 aa21.27■■□□□ 1
CHI3L1-202ENST00000404436 MYL6BP14649 208 aa21.26■□□□□ 0.99
CHI3L1-202ENST00000404436 EIF2S2P20042 333 aaKnown RBP21.26■□□□□ 0.99
CHI3L1-202ENST00000404436 PRR5LQ6MZQ0 368 aa21.26■□□□□ 0.99
CHI3L1-202ENST00000404436 ARHGAP27Q6ZUM4 889 aa21.26■□□□□ 0.99
CHI3L1-202ENST00000404436 CCDC24Q8N4L8 307 aa21.26■□□□□ 0.99
CHI3L1-202ENST00000404436 NPHP1O15259 732 aa21.25■□□□□ 0.99
CHI3L1-202ENST00000404436 H0YIN7 160 aa21.24■□□□□ 0.99
CHI3L1-202ENST00000404436 RGL2O15211 777 aa21.24■□□□□ 0.99
CHI3L1-202ENST00000404436 HLFQ16534 295 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms