RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 ZNF790Q6PG37 636 aa20.54■□□□□ 0.88
TPM1-207ENST00000403994 ZNF496Q96IT1 587 aaPredicted RBP20.54■□□□□ 0.88
TPM1-207ENST00000403994 PARP3Q9Y6F1 533 aa20.54■□□□□ 0.88
TPM1-207ENST00000403994 ARFGEF1Q9Y6D6 1849 aa20.54■□□□□ 0.88
TPM1-207ENST00000403994 FCHSD2O94868 740 aa20.53■□□□□ 0.88
TPM1-207ENST00000403994 ADCY9O60503 1353 aa20.53■□□□□ 0.88
TPM1-207ENST00000403994 BCORQ6W2J9 1755 aa20.53■□□□□ 0.88
TPM1-207ENST00000403994 ZPR1O75312 459 aa20.51■□□□□ 0.87
TPM1-207ENST00000403994 TGFB2P61812 414 aa20.51■□□□□ 0.87
TPM1-207ENST00000403994 USPL1Q5W0Q7 1092 aa20.51■□□□□ 0.87
TPM1-207ENST00000403994 LAMB4A4D0S4 1761 aa20.51■□□□□ 0.87
TPM1-207ENST00000403994 DLEC1Q9Y238 1755 aa20.51■□□□□ 0.87
TPM1-207ENST00000403994 ATP10DQ9P241 1426 aa20.5■□□□□ 0.87
TPM1-207ENST00000403994 KDM3BQ7LBC6 1761 aa20.49■□□□□ 0.87
TPM1-207ENST00000403994 POLRMTO00411 1230 aaKnown RBP20.49■□□□□ 0.87
TPM1-207ENST00000403994 STARD3NLO95772 234 aa20.49■□□□□ 0.87
TPM1-207ENST00000403994 MCM10Q7L590 875 aa20.49■□□□□ 0.87
TPM1-207ENST00000403994 NARFQ9UHQ1 456 aa20.49■□□□□ 0.87
TPM1-207ENST00000403994 A0A0G2JLW4 131 aa20.48■□□□□ 0.87
TPM1-207ENST00000403994 CANXP27824 592 aaKnown RBP20.48■□□□□ 0.87
TPM1-207ENST00000403994 FMNL2Q96PY5 1086 aa20.48■□□□□ 0.87
TPM1-207ENST00000403994 BTBD11A6QL63 1104 aa20.47■□□□□ 0.87
TPM1-207ENST00000403994 KCNQ3O43525 872 aa20.47■□□□□ 0.87
TPM1-207ENST00000403994 DPEP1P16444 411 aa20.47■□□□□ 0.87
TPM1-207ENST00000403994 RTF1Q92541 710 aaKnown RBP20.47■□□□□ 0.87
TPM1-207ENST00000403994 TM4SF1P30408 202 aa20.46■□□□□ 0.87
TPM1-207ENST00000403994 EIF5P55010 431 aaKnown RBP20.46■□□□□ 0.87
TPM1-207ENST00000403994 BCL2L12Q9HB09 334 aa20.46■□□□□ 0.87
TPM1-207ENST00000403994 DCTN1Q14203 1278 aa20.45■□□□□ 0.86
TPM1-207ENST00000403994 NFIXQ14938 502 aa20.45■□□□□ 0.86
TPM1-207ENST00000403994 TEX13AQ9BXU3 409 aaPredicted RBP20.45■□□□□ 0.86
TPM1-207ENST00000403994 BCS1LQ9Y276 419 aa20.45■□□□□ 0.86
TPM1-207ENST00000403994 CEP350Q5VT06 3117 aa20.44■□□□□ 0.86
TPM1-207ENST00000403994 ANKRD31Q8N7Z5 1873 aa20.44■□□□□ 0.86
TPM1-207ENST00000403994 HTATSF1O43719 755 aaKnown RBP20.43■□□□□ 0.86
TPM1-207ENST00000403994 KCNA3P22001 575 aa20.43■□□□□ 0.86
TPM1-207ENST00000403994 COL11A2P13942 1736 aaPredicted RBP20.43■□□□□ 0.86
TPM1-207ENST00000403994 A0A087WZG4 1122 aa20.42■□□□□ 0.86
TPM1-207ENST00000403994 GIGYF1O75420 1035 aaPredicted RBP20.42■□□□□ 0.86
TPM1-207ENST00000403994 PLEKHF1Q96S99 279 aa20.42■□□□□ 0.86
TPM1-207ENST00000403994 IL6STP40189 918 aaPredicted RBP20.41■□□□□ 0.86
TPM1-207ENST00000403994 RALBP1Q15311 655 aa20.41■□□□□ 0.86
TPM1-207ENST00000403994 ZNF330Q9Y3S2 320 aaPredicted RBP20.41■□□□□ 0.86
TPM1-207ENST00000403994 CARMIL3Q8ND23 1372 aa20.41■□□□□ 0.86
TPM1-207ENST00000403994 PRAMEF22A3QJZ6 481 aa20.4■□□□□ 0.86
TPM1-207ENST00000403994 A1BGP04217 495 aa20.4■□□□□ 0.86
TPM1-207ENST00000403994 NEFMP07197 916 aa20.4■□□□□ 0.86
TPM1-207ENST00000403994 CHRNA5P30532 468 aa20.39■□□□□ 0.85
TPM1-207ENST00000403994 C1QTNF8P60827 252 aa20.39■□□□□ 0.85
TPM1-207ENST00000403994 MAPK8IP3Q9UPT6 1336 aa20.38■□□□□ 0.85
TPM1-207ENST00000403994 DDX10Q13206 875 aaKnown RBP20.38■□□□□ 0.85
TPM1-207ENST00000403994 NFE2L2Q16236 605 aa20.38■□□□□ 0.85
TPM1-207ENST00000403994 PIM2Q9P1W9 311 aa20.38■□□□□ 0.85
TPM1-207ENST00000403994 SERPINB2P05120 415 aa20.37■□□□□ 0.85
TPM1-207ENST00000403994 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
TPM1-207ENST00000403994 TBC1D9BQ66K14 1250 aa20.37■□□□□ 0.85
TPM1-207ENST00000403994 TBC1D2BQ9UPU7 963 aa20.37■□□□□ 0.85
TPM1-207ENST00000403994 USP16Q9Y5T5 823 aa20.37■□□□□ 0.85
TPM1-207ENST00000403994 MYBBP1AQ9BQG0 1328 aaKnown RBP20.36■□□□□ 0.85
TPM1-207ENST00000403994 CAMTA2O94983 1202 aa20.36■□□□□ 0.85
TPM1-207ENST00000403994 PIP4K2AP48426 406 aaPredicted RBP20.36■□□□□ 0.85
TPM1-207ENST00000403994 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
TPM1-207ENST00000403994 DALRD3Q5D0E6 543 aaKnown RBP20.36■□□□□ 0.85
TPM1-207ENST00000403994 BICDL1Q6ZP65 573 aa20.36■□□□□ 0.85
TPM1-207ENST00000403994 SBF1O95248 1867 aa20.36■□□□□ 0.85
TPM1-207ENST00000403994 ZNF526Q8TF50 670 aaPredicted RBP20.35■□□□□ 0.85
TPM1-207ENST00000403994 GPBP1L1Q9HC44 474 aaPredicted RBP20.35■□□□□ 0.85
TPM1-207ENST00000403994 ARHGAP27Q6ZUM4 889 aa20.34■□□□□ 0.85
TPM1-207ENST00000403994 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
TPM1-207ENST00000403994 MIS18AQ9NYP9 233 aa20.34■□□□□ 0.85
TPM1-207ENST00000403994 ARFGEF2Q9Y6D5 1785 aa20.34■□□□□ 0.85
TPM1-207ENST00000403994 CACNA1SQ13698 1873 aa20.33■□□□□ 0.85
TPM1-207ENST00000403994 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.85
TPM1-207ENST00000403994 DZIP3Q86Y13 1208 aaKnown RBP20.33■□□□□ 0.85
TPM1-207ENST00000403994 PNNQ9H307 717 aaKnown RBP20.33■□□□□ 0.85
TPM1-207ENST00000403994 TIAM2Q8IVF5 1701 aa20.32■□□□□ 0.84
TPM1-207ENST00000403994 NBPF26B4DH59 902 aa20.31■□□□□ 0.84
TPM1-207ENST00000403994 NBPF10Q6P3W6 841 aaKnown RBP20.31■□□□□ 0.84
TPM1-207ENST00000403994 NBPF15Q8N660 670 aa20.31■□□□□ 0.84
TPM1-207ENST00000403994 PNISRQ8TF01 805 aaKnown RBP20.31■□□□□ 0.84
TPM1-207ENST00000403994 PRR5LQ6MZQ0 368 aa20.3■□□□□ 0.84
TPM1-207ENST00000403994 C2CD5Q86YS7 1000 aa20.3■□□□□ 0.84
TPM1-207ENST00000403994 CNBD1Q8NA66 436 aa20.29■□□□□ 0.84
TPM1-207ENST00000403994 NUP98P52948 1817 aa20.28■□□□□ 0.84
TPM1-207ENST00000403994 SENP3-EIF4A1A0A087X0R7 540 aa20.28■□□□□ 0.84
TPM1-207ENST00000403994 EIF4A1P60842 406 aaKnown RBP20.28■□□□□ 0.84
TPM1-207ENST00000403994 SETDB2Q96T68 719 aa20.28■□□□□ 0.84
TPM1-207ENST00000403994 TNRC6CQ9HCJ0 1690 aaKnown RBP20.28■□□□□ 0.84
TPM1-207ENST00000403994 C9orf131Q5VYM1 1079 aa20.27■□□□□ 0.84
TPM1-207ENST00000403994 CCDC24Q8N4L8 307 aa20.27■□□□□ 0.84
TPM1-207ENST00000403994 ZNF652Q9Y2D9 606 aa20.27■□□□□ 0.84
TPM1-207ENST00000403994 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
TPM1-207ENST00000403994 H0YIN7 160 aa20.26■□□□□ 0.83
TPM1-207ENST00000403994 CLEC4GQ6UXB4 293 aa20.26■□□□□ 0.83
TPM1-207ENST00000403994 TTLL6Q8N841 843 aa20.26■□□□□ 0.83
TPM1-207ENST00000403994 BRIP1Q9BX63 1249 aa20.26■□□□□ 0.83
TPM1-207ENST00000403994 FER1L6Q2WGJ9 1857 aa20.26■□□□□ 0.83
TPM1-207ENST00000403994 RGL2O15211 777 aa20.25■□□□□ 0.83
TPM1-207ENST00000403994 RIPK4P57078 832 aa20.25■□□□□ 0.83
TPM1-207ENST00000403994 RASSF7Q02833 373 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms