RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CCT4P50991 539 aaKnown RBP24.22■■□□□ 1.47
CCDC47-202ENST00000403162 NBPF6Q5VWK0 638 aa24.22■■□□□ 1.47
CCDC47-202ENST00000403162 NBPF4Q96M43 638 aa24.22■■□□□ 1.47
CCDC47-202ENST00000403162 ERBB3P21860 1342 aa24.22■■□□□ 1.47
CCDC47-202ENST00000403162 PDE1AP54750 535 aa24.22■■□□□ 1.47
CCDC47-202ENST00000403162 ZDHHC9Q9Y397 364 aa24.22■■□□□ 1.47
CCDC47-202ENST00000403162 CSB-PGBD3P0DP91 1061 aa24.2■■□□□ 1.47
CCDC47-202ENST00000403162 NUTM2BA6NNL0 878 aaPredicted RBP24.2■■□□□ 1.46
CCDC47-202ENST00000403162 NUTM2EB1AL46 878 aaPredicted RBP24.2■■□□□ 1.46
CCDC47-202ENST00000403162 HS1BP3Q53T59 392 aa24.2■■□□□ 1.46
CCDC47-202ENST00000403162 NUTM2AQ8IVF1 878 aaPredicted RBP24.2■■□□□ 1.46
CCDC47-202ENST00000403162 KDRP35968 1356 aa24.19■■□□□ 1.46
CCDC47-202ENST00000403162 RRP9O43818 475 aaKnown RBP24.19■■□□□ 1.46
CCDC47-202ENST00000403162 NCLP19338 710 aaKnown RBP24.19■■□□□ 1.46
CCDC47-202ENST00000403162 RGPD2P0DJD1 1756 aa24.18■■□□□ 1.46
CCDC47-202ENST00000403162 HSPA1LP34931 641 aa24.18■■□□□ 1.46
CCDC47-202ENST00000403162 JCADQ9P266 1359 aa24.18■■□□□ 1.46
CCDC47-202ENST00000403162 SALL3Q9BXA9 1300 aa24.18■■□□□ 1.46
CCDC47-202ENST00000403162 ADAMTS2O95450 1211 aa24.18■■□□□ 1.46
CCDC47-202ENST00000403162 TPM2P07951 284 aa24.18■■□□□ 1.46
CCDC47-202ENST00000403162 CAMTA1Q9Y6Y1 1673 aa24.17■■□□□ 1.46
CCDC47-202ENST00000403162 MCM2P49736 904 aa24.17■■□□□ 1.46
CCDC47-202ENST00000403162 GPT2Q8TD30 523 aa24.17■■□□□ 1.46
CCDC47-202ENST00000403162 NLRP2Q9NX02 1062 aa24.17■■□□□ 1.46
CCDC47-202ENST00000403162 LMO7Q8WWI1 1683 aa24.17■■□□□ 1.46
CCDC47-202ENST00000403162 PRPF40AO75400 957 aaKnown RBP24.16■■□□□ 1.46
CCDC47-202ENST00000403162 G2E3Q7L622 706 aa24.16■■□□□ 1.46
CCDC47-202ENST00000403162 PDLIM2Q96JY6 352 aa24.16■■□□□ 1.46
CCDC47-202ENST00000403162 GNAI2P04899 355 aa24.15■■□□□ 1.46
CCDC47-202ENST00000403162 RBSNQ9H1K0 784 aa24.15■■□□□ 1.46
CCDC47-202ENST00000403162 TSPYL4Q9UJ04 414 aa24.15■■□□□ 1.46
CCDC47-202ENST00000403162 SLC4A10Q6U841 1118 aa24.14■■□□□ 1.45
CCDC47-202ENST00000403162 F6X3S4 739 aa24.13■■□□□ 1.45
CCDC47-202ENST00000403162 EVA1CP58658 441 aa24.13■■□□□ 1.45
CCDC47-202ENST00000403162 HSP90AA2PQ14568 343 aaPredicted RBP24.13■■□□□ 1.45
CCDC47-202ENST00000403162 TMX3Q96JJ7 454 aa24.13■■□□□ 1.45
CCDC47-202ENST00000403162 ESYT1Q9BSJ8 1104 aa24.13■■□□□ 1.45
CCDC47-202ENST00000403162 STRN4Q9NRL3 753 aa24.13■■□□□ 1.45
CCDC47-202ENST00000403162 COL5A2P05997 1499 aaPredicted RBP24.13■■□□□ 1.45
CCDC47-202ENST00000403162 MSNP26038 577 aaKnown RBP24.13■■□□□ 1.45
CCDC47-202ENST00000403162 PRIM1P49642 420 aaKnown RBP24.13■■□□□ 1.45
CCDC47-202ENST00000403162 RTF1Q92541 710 aaKnown RBP24.13■■□□□ 1.45
CCDC47-202ENST00000403162 N4BP2Q86UW6 1770 aaPredicted RBP24.13■■□□□ 1.45
CCDC47-202ENST00000403162 FAM208AQ9UK61 1670 aaKnown RBP24.13■■□□□ 1.45
CCDC47-202ENST00000403162 LRRC37A3O60309 1634 aa24.12■■□□□ 1.45
CCDC47-202ENST00000403162 NEK4P51957 841 aa24.12■■□□□ 1.45
CCDC47-202ENST00000403162 ANAPC15P60006 121 aa24.12■■□□□ 1.45
CCDC47-202ENST00000403162 CUL4AQ13619 759 aa24.12■■□□□ 1.45
CCDC47-202ENST00000403162 BTG4Q9NY30 223 aa24.12■■□□□ 1.45
CCDC47-202ENST00000403162 MIS18AQ9NYP9 233 aa24.12■■□□□ 1.45
CCDC47-202ENST00000403162 OFD1O75665 1012 aa24.12■■□□□ 1.45
CCDC47-202ENST00000403162 MTHFSDQ2M296 383 aaKnown RBP24.12■■□□□ 1.45
CCDC47-202ENST00000403162 IL17RAQ96F46 866 aa24.12■■□□□ 1.45
CCDC47-202ENST00000403162 COL14A1Q05707 1796 aaKnown RBP24.12■■□□□ 1.45
CCDC47-202ENST00000403162 WDR17Q8IZU2 1322 aa24.11■■□□□ 1.45
CCDC47-202ENST00000403162 LRSAM1Q6UWE0 723 aa24.11■■□□□ 1.45
CCDC47-202ENST00000403162 LRRCC1Q9C099 1032 aa24.11■■□□□ 1.45
CCDC47-202ENST00000403162 NCAPD2Q15021 1401 aa24.11■■□□□ 1.45
CCDC47-202ENST00000403162 MCCP23508 829 aa24.1■■□□□ 1.45
CCDC47-202ENST00000403162 MBD3O95983 291 aa24.1■■□□□ 1.45
CCDC47-202ENST00000403162 TOM1L2Q6ZVM7 507 aa24.1■■□□□ 1.45
CCDC47-202ENST00000403162 RBM27Q9P2N5 1060 aaKnown RBP24.1■■□□□ 1.45
CCDC47-202ENST00000403162 EXOC6BQ9Y2D4 811 aa24.1■■□□□ 1.45
CCDC47-202ENST00000403162 CACNA1FO60840 1977 aa24.1■■□□□ 1.45
CCDC47-202ENST00000403162 BRD1O95696 1058 aa24.09■■□□□ 1.45
CCDC47-202ENST00000403162 GNAI3P08754 354 aa24.09■■□□□ 1.45
CCDC47-202ENST00000403162 MX1P20591 662 aa24.09■■□□□ 1.45
CCDC47-202ENST00000403162 INTS4Q96HW7 963 aaKnown RBP24.09■■□□□ 1.45
CCDC47-202ENST00000403162 TMEM63CQ9P1W3 806 aa24.09■■□□□ 1.45
CCDC47-202ENST00000403162 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.09■■□□□ 1.45
CCDC47-202ENST00000403162 STK31Q9BXU1 1019 aa24.09■■□□□ 1.45
CCDC47-202ENST00000403162 NOL7Q9UMY1 257 aaKnown RBP24.09■■□□□ 1.45
CCDC47-202ENST00000403162 GLIPR1L2Q4G1C9 344 aa24.08■■□□□ 1.45
CCDC47-202ENST00000403162 STAP2Q9UGK3 403 aa24.08■■□□□ 1.45
CCDC47-202ENST00000403162 LARP1Q6PKG0 1096 aaKnown RBP24.08■■□□□ 1.44
CCDC47-202ENST00000403162 KIAA1211Q6ZU35 1233 aa24.08■■□□□ 1.44
CCDC47-202ENST00000403162 CHMLP26374 656 aa24.07■■□□□ 1.44
CCDC47-202ENST00000403162 TERF1P54274 439 aa24.07■■□□□ 1.44
CCDC47-202ENST00000403162 ATP8B2P98198 1209 aa24.07■■□□□ 1.44
CCDC47-202ENST00000403162 SPATA31A6Q5VVP1 1343 aa24.06■■□□□ 1.44
CCDC47-202ENST00000403162 HTATSF1O43719 755 aaKnown RBP24.06■■□□□ 1.44
CCDC47-202ENST00000403162 SRCIN1Q9C0H9 1055 aa24.06■■□□□ 1.44
CCDC47-202ENST00000403162 ZNF500O60304 480 aaPredicted RBP24.06■■□□□ 1.44
CCDC47-202ENST00000403162 AOX1Q06278 1338 aa24.05■■□□□ 1.44
CCDC47-202ENST00000403162 FLIIQ13045 1269 aa24.05■■□□□ 1.44
CCDC47-202ENST00000403162 TSHZ3Q63HK5 1081 aa24.05■■□□□ 1.44
CCDC47-202ENST00000403162 RAPGEF4Q8WZA2 1011 aa24.05■■□□□ 1.44
CCDC47-202ENST00000403162 PXDNLA1KZ92 1463 aa24.05■■□□□ 1.44
CCDC47-202ENST00000403162 SOS1Q07889 1333 aaPredicted RBP24.05■■□□□ 1.44
CCDC47-202ENST00000403162 EPB41L2O43491 1005 aaKnown RBP24.05■■□□□ 1.44
CCDC47-202ENST00000403162 CCDC30Q5VVM6 783 aa24.05■■□□□ 1.44
CCDC47-202ENST00000403162 PNMA6EA0A0J9YXQ4 647 aa24.04■■□□□ 1.44
CCDC47-202ENST00000403162 PALD1Q9ULE6 856 aa24.04■■□□□ 1.44
CCDC47-202ENST00000403162 NSFL1CQ9UNZ2 370 aaKnown RBP24.04■■□□□ 1.44
CCDC47-202ENST00000403162 SYCE3A1L190 88 aa24.03■■□□□ 1.44
CCDC47-202ENST00000403162 CARD10Q9BWT7 1032 aa24.03■■□□□ 1.44
CCDC47-202ENST00000403162 CHAMP1Q96JM3 812 aa24.03■■□□□ 1.44
CCDC47-202ENST00000403162 PLCH1Q4KWH8 1693 aa24.02■■□□□ 1.44
CCDC47-202ENST00000403162 PLEKHO1Q53GL0 409 aaPredicted RBP24.02■■□□□ 1.44
CCDC47-202ENST00000403162 ANO2Q9NQ90 1003 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms