RNA–Protein interactions for RNA: ENST00000402383.3

VIM2P-201, Transcript of vimentin 2, pseudogene, humanhuman

BASIC

Gene VIM2P, Length 1,294 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM2P-201ENST00000402383 UBR3Q6ZT12 1888 aa9.1□□□□□ -0.95
VIM2P-201ENST00000402383 CICQ96RK0 1608 aaPredicted RBP9.09□□□□□ -0.95
VIM2P-201ENST00000402383 FOXK1P85037 733 aa9.09□□□□□ -0.95
VIM2P-201ENST00000402383 CAMK2BQ13554 666 aa9.09□□□□□ -0.95
VIM2P-201ENST00000402383 EMILIN1Q9Y6C2 1016 aa9.09□□□□□ -0.95
VIM2P-201ENST00000402383 KIF3CO14782 793 aa9.08□□□□□ -0.96
VIM2P-201ENST00000402383 CYP27B1O15528 508 aa9.08□□□□□ -0.96
VIM2P-201ENST00000402383 TATP17735 454 aaPredicted RBP9.08□□□□□ -0.96
VIM2P-201ENST00000402383 PRIM1P49642 420 aaKnown RBP9.08□□□□□ -0.96
VIM2P-201ENST00000402383 TMEM92Q6UXU6 159 aa9.08□□□□□ -0.96
VIM2P-201ENST00000402383 PLPP6Q8IY26 295 aa9.08□□□□□ -0.96
VIM2P-201ENST00000402383 LTV1Q96GA3 475 aaPredicted RBP9.08□□□□□ -0.96
VIM2P-201ENST00000402383 ACSBG1Q96GR2 724 aa9.08□□□□□ -0.96
VIM2P-201ENST00000402383 NPC1L1Q9UHC9 1359 aa9.08□□□□□ -0.96
VIM2P-201ENST00000402383 VIRMAQ69YN4 1812 aaKnown RBP9.08□□□□□ -0.96
VIM2P-201ENST00000402383 IGSF1Q8N6C5 1336 aa9.07□□□□□ -0.96
VIM2P-201ENST00000402383 DDX54Q8TDD1 881 aaKnown RBP9.07□□□□□ -0.96
VIM2P-201ENST00000402383 EYA1Q99502 592 aa9.07□□□□□ -0.96
VIM2P-201ENST00000402383 PDGFDQ9GZP0 370 aaPredicted RBP9.07□□□□□ -0.96
VIM2P-201ENST00000402383 KDRP35968 1356 aa9.07□□□□□ -0.96
VIM2P-201ENST00000402383 SCN11AQ9UI33 1791 aa9.07□□□□□ -0.96
VIM2P-201ENST00000402383 C4BP0C0L5 1744 aa9.06□□□□□ -0.96
VIM2P-201ENST00000402383 SEMA3EO15041 775 aa9.06□□□□□ -0.96
VIM2P-201ENST00000402383 ZNF827Q17R98 1081 aa9.06□□□□□ -0.96
VIM2P-201ENST00000402383 CCER1Q8TC90 406 aaPredicted RBP9.06□□□□□ -0.96
VIM2P-201ENST00000402383 PANK3Q9H999 370 aa9.06□□□□□ -0.96
VIM2P-201ENST00000402383 ADAMTS7Q9UKP4 1686 aa9.06□□□□□ -0.96
VIM2P-201ENST00000402383 COL5A3P25940 1745 aaPredicted RBP9.05□□□□□ -0.96
VIM2P-201ENST00000402383 PER1O15534 1290 aaPredicted RBP9.05□□□□□ -0.96
VIM2P-201ENST00000402383 SMARCC1Q92922 1105 aaPredicted RBP9.05□□□□□ -0.96
VIM2P-201ENST00000402383 EMILIN3Q9NT22 766 aa9.05□□□□□ -0.96
VIM2P-201ENST00000402383 SPG7Q9UQ90 795 aa9.05□□□□□ -0.96
VIM2P-201ENST00000402383 PNPLA7Q6ZV29 1317 aa9.05□□□□□ -0.96
VIM2P-201ENST00000402383 DPYSL4O14531 572 aa9.04□□□□□ -0.96
VIM2P-201ENST00000402383 EIF4A2Q14240 407 aaKnown RBP9.04□□□□□ -0.96
VIM2P-201ENST00000402383 FLAD1Q8NFF5 587 aa9.04□□□□□ -0.96
VIM2P-201ENST00000402383 KIF13BQ9NQT8 1826 aa9.03□□□□□ -0.96
VIM2P-201ENST00000402383 ERVV-2B6SEH9 535 aa9.03□□□□□ -0.96
VIM2P-201ENST00000402383 TULP1O00294 542 aaPredicted RBP9.03□□□□□ -0.96
VIM2P-201ENST00000402383 PHKG2P15735 406 aa9.03□□□□□ -0.96
VIM2P-201ENST00000402383 IFNL2Q8IZJ0 200 aa9.03□□□□□ -0.96
VIM2P-201ENST00000402383 USHBP1Q8N6Y0 703 aa9.03□□□□□ -0.96
VIM2P-201ENST00000402383 SYT17Q9BSW7 474 aa9.03□□□□□ -0.96
VIM2P-201ENST00000402383 PPP1R1BQ9UD71 204 aaPredicted RBP9.03□□□□□ -0.96
VIM2P-201ENST00000402383 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
VIM2P-201ENST00000402383 KIF7Q2M1P5 1343 aa9.03□□□□□ -0.96
VIM2P-201ENST00000402383 MYH14Q7Z406 1995 aaKnown RBP9.03□□□□□ -0.96
VIM2P-201ENST00000402383 PALLDQ8WX93 1383 aa9.02□□□□□ -0.97
VIM2P-201ENST00000402383 ZBTB7AO95365 584 aa9.02□□□□□ -0.97
VIM2P-201ENST00000402383 AMOTQ4VCS5 1084 aa9.02□□□□□ -0.97
VIM2P-201ENST00000402383 ARXQ96QS3 562 aa9.02□□□□□ -0.97
VIM2P-201ENST00000402383 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.02□□□□□ -0.97
VIM2P-201ENST00000402383 CCNL1Q9UK58 526 aaPredicted RBP9.02□□□□□ -0.97
VIM2P-201ENST00000402383 HSP90AB1P08238 724 aaKnown RBP9.01□□□□□ -0.97
VIM2P-201ENST00000402383 PIGBQ92521 554 aa9.01□□□□□ -0.97
VIM2P-201ENST00000402383 KNSTRNQ9Y448 316 aa9.01□□□□□ -0.97
VIM2P-201ENST00000402383 CEP350Q5VT06 3117 aa9□□□□□ -0.97
VIM2P-201ENST00000402383 TESPA1A2RU30 521 aaPredicted RBP9□□□□□ -0.97
VIM2P-201ENST00000402383 IL13P35225 146 aa9□□□□□ -0.97
VIM2P-201ENST00000402383 SYTL4Q96C24 671 aaPredicted RBP9□□□□□ -0.97
VIM2P-201ENST00000402383 DCAF5Q96JK2 942 aa9□□□□□ -0.97
VIM2P-201ENST00000402383 FHDC1Q9C0D6 1143 aaPredicted RBP9□□□□□ -0.97
VIM2P-201ENST00000402383 TFCP2L1Q9NZI6 479 aa9□□□□□ -0.97
VIM2P-201ENST00000402383 MRC1P22897 1456 aa9□□□□□ -0.97
VIM2P-201ENST00000402383 UBR2Q8IWV8 1755 aa8.99□□□□□ -0.97
VIM2P-201ENST00000402383 KDM6AO15550 1401 aaPredicted RBP8.99□□□□□ -0.97
VIM2P-201ENST00000402383 SSFA2P28290 1259 aa8.99□□□□□ -0.97
VIM2P-201ENST00000402383 RC3H1Q5TC82 1133 aaKnown RBP8.99□□□□□ -0.97
VIM2P-201ENST00000402383 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.99□□□□□ -0.97
VIM2P-201ENST00000402383 MORC1Q86VD1 984 aa8.99□□□□□ -0.97
VIM2P-201ENST00000402383 COL23A1Q86Y22 540 aaPredicted RBP8.99□□□□□ -0.97
VIM2P-201ENST00000402383 COL3A1P02461 1466 aaPredicted RBP8.99□□□□□ -0.97
VIM2P-201ENST00000402383 SIPA1L3O60292 1781 aaPredicted RBP8.99□□□□□ -0.97
VIM2P-201ENST00000402383 LOC102724428A0A0B4J2F2 783 aa8.98□□□□□ -0.97
VIM2P-201ENST00000402383 PPM1GO15355 546 aaPredicted RBP8.98□□□□□ -0.97
VIM2P-201ENST00000402383 POLD1P28340 1107 aa8.98□□□□□ -0.97
VIM2P-201ENST00000402383 SIK1P57059 783 aa8.98□□□□□ -0.97
VIM2P-201ENST00000402383 MAP3K9P80192 1104 aa8.98□□□□□ -0.97
VIM2P-201ENST00000402383 PLEKHO1Q53GL0 409 aaPredicted RBP8.98□□□□□ -0.97
VIM2P-201ENST00000402383 MPRIPQ6WCQ1 1025 aa8.98□□□□□ -0.97
VIM2P-201ENST00000402383 C4AP0C0L4 1744 aa8.97□□□□□ -0.97
VIM2P-201ENST00000402383 TJP1Q07157 1748 aa8.97□□□□□ -0.97
VIM2P-201ENST00000402383 KIAA1551Q9HCM1 1747 aa8.97□□□□□ -0.97
VIM2P-201ENST00000402383 ATG3Q9NT62 314 aa8.97□□□□□ -0.97
VIM2P-201ENST00000402383 TMOD3Q9NYL9 352 aa8.97□□□□□ -0.97
VIM2P-201ENST00000402383 CD2APQ9Y5K6 639 aa8.97□□□□□ -0.97
VIM2P-201ENST00000402383 BRCA1P38398 1863 aaKnown RBP8.97□□□□□ -0.97
VIM2P-201ENST00000402383 KCNQ4P56696 695 aa8.96□□□□□ -0.98
VIM2P-201ENST00000402383 SMYD5Q6GMV2 418 aa8.96□□□□□ -0.98
VIM2P-201ENST00000402383 ASAP1Q9ULH1 1129 aa8.96□□□□□ -0.98
VIM2P-201ENST00000402383 CNTNAP4Q9C0A0 1308 aa8.96□□□□□ -0.98
VIM2P-201ENST00000402383 POTEB2H3BUK9 544 aa8.95□□□□□ -0.98
VIM2P-201ENST00000402383 MLLT3P42568 568 aaPredicted RBP8.95□□□□□ -0.98
VIM2P-201ENST00000402383 PDIA6Q15084 440 aa8.95□□□□□ -0.98
VIM2P-201ENST00000402383 LINC00116Q8NCU8 138 aa8.95□□□□□ -0.98
VIM2P-201ENST00000402383 SLC4A9Q96Q91 983 aa8.95□□□□□ -0.98
VIM2P-201ENST00000402383 SPDYE16A6NNV3 312 aaPredicted RBP8.94□□□□□ -0.98
VIM2P-201ENST00000402383 POTEJP0CG39 1038 aa8.94□□□□□ -0.98
VIM2P-201ENST00000402383 YY1P25490 414 aa8.94□□□□□ -0.98
VIM2P-201ENST00000402383 TNNT2P45379 298 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms