RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
ATG3-202ENST00000402314 DTNBO60941 627 aa17.17■□□□□ 0.34
ATG3-202ENST00000402314 RABEP1Q15276 862 aa17.17■□□□□ 0.34
ATG3-202ENST00000402314 NUTM1Q86Y26 1132 aa17.16■□□□□ 0.34
ATG3-202ENST00000402314 ORAI2Q96SN7 254 aa17.16■□□□□ 0.34
ATG3-202ENST00000402314 LRRCC1Q9C099 1032 aa17.16■□□□□ 0.34
ATG3-202ENST00000402314 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
ATG3-202ENST00000402314 PLCB2Q00722 1185 aa17.15■□□□□ 0.34
ATG3-202ENST00000402314 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
ATG3-202ENST00000402314 CHPF2Q9P2E5 772 aa17.15■□□□□ 0.34
ATG3-202ENST00000402314 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
ATG3-202ENST00000402314 ERC2O15083 957 aa17.14■□□□□ 0.33
ATG3-202ENST00000402314 ATP8B2P98198 1209 aa17.14■□□□□ 0.33
ATG3-202ENST00000402314 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
ATG3-202ENST00000402314 PALD1Q9ULE6 856 aa17.14■□□□□ 0.33
ATG3-202ENST00000402314 ZKSCAN5Q9Y2L8 839 aa17.14■□□□□ 0.33
ATG3-202ENST00000402314 GNAI3P08754 354 aa17.14■□□□□ 0.33
ATG3-202ENST00000402314 NBPF7P0C2Y1 421 aaPredicted RBP17.14■□□□□ 0.33
ATG3-202ENST00000402314 MX1P20591 662 aa17.14■□□□□ 0.33
ATG3-202ENST00000402314 IL25Q9H293 177 aa17.14■□□□□ 0.33
ATG3-202ENST00000402314 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
ATG3-202ENST00000402314 HTATSF1O43719 755 aaKnown RBP17.13■□□□□ 0.33
ATG3-202ENST00000402314 IGSF3O75054 1194 aa17.13■□□□□ 0.33
ATG3-202ENST00000402314 PTMSP20962 102 aa17.13■□□□□ 0.33
ATG3-202ENST00000402314 ZNF445P59923 1031 aa17.13■□□□□ 0.33
ATG3-202ENST00000402314 PRAMEF22A3QJZ6 481 aa17.13■□□□□ 0.33
ATG3-202ENST00000402314 CBX1P83916 185 aa17.13■□□□□ 0.33
ATG3-202ENST00000402314 IP6K1Q92551 441 aa17.13■□□□□ 0.33
ATG3-202ENST00000402314 ZDHHC9Q9Y397 364 aa17.13■□□□□ 0.33
ATG3-202ENST00000402314 PI4KAP2A4QPH2 592 aa17.12■□□□□ 0.33
ATG3-202ENST00000402314 PI4KAP1Q8N8J0 262 aa17.12■□□□□ 0.33
ATG3-202ENST00000402314 ANO2Q9NQ90 1003 aa17.12■□□□□ 0.33
ATG3-202ENST00000402314 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
ATG3-202ENST00000402314 NEK4P51957 841 aa17.12■□□□□ 0.33
ATG3-202ENST00000402314 ZNF530Q6P9A1 599 aaPredicted RBP17.12■□□□□ 0.33
ATG3-202ENST00000402314 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
ATG3-202ENST00000402314 REC8O95072 547 aa17.11■□□□□ 0.33
ATG3-202ENST00000402314 NUCB2P80303 420 aa17.11■□□□□ 0.33
ATG3-202ENST00000402314 SALL3Q9BXA9 1300 aa17.11■□□□□ 0.33
ATG3-202ENST00000402314 EIF4A1P60842 406 aaKnown RBP17.1■□□□□ 0.33
ATG3-202ENST00000402314 ANKLE2Q86XL3 938 aa17.1■□□□□ 0.33
ATG3-202ENST00000402314 FER1L4A9Z1Z3 1794 aa17.1■□□□□ 0.33
ATG3-202ENST00000402314 OSBPL3Q9H4L5 887 aa17.1■□□□□ 0.33
ATG3-202ENST00000402314 ZNF500O60304 480 aaPredicted RBP17.1■□□□□ 0.33
ATG3-202ENST00000402314 ESYT1Q9BSJ8 1104 aa17.1■□□□□ 0.33
ATG3-202ENST00000402314 UPF3BQ9BZI7 483 aaKnown RBP17.1■□□□□ 0.33
ATG3-202ENST00000402314 SRGAP3O43295 1099 aa17.09■□□□□ 0.33
ATG3-202ENST00000402314 TEFQ10587 303 aa17.09■□□□□ 0.33
ATG3-202ENST00000402314 IBTKQ9P2D0 1353 aaPredicted RBP17.09■□□□□ 0.33
ATG3-202ENST00000402314 ANKARQ7Z5J8 1434 aa17.09■□□□□ 0.33
ATG3-202ENST00000402314 PROSER3Q2NL68 480 aa17.09■□□□□ 0.33
ATG3-202ENST00000402314 SRCIN1Q9C0H9 1055 aa17.09■□□□□ 0.33
ATG3-202ENST00000402314 ST18O60284 1047 aa17.08■□□□□ 0.33
ATG3-202ENST00000402314 CHMLP26374 656 aa17.08■□□□□ 0.33
ATG3-202ENST00000402314 PDLIM2Q96JY6 352 aa17.08■□□□□ 0.33
ATG3-202ENST00000402314 TTC12Q9H892 705 aaPredicted RBP17.08■□□□□ 0.33
ATG3-202ENST00000402314 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.08■□□□□ 0.33
ATG3-202ENST00000402314 XRN1Q8IZH2 1706 aaKnown RBP17.08■□□□□ 0.33
ATG3-202ENST00000402314 BTBD11A6QL63 1104 aa17.08■□□□□ 0.32
ATG3-202ENST00000402314 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
ATG3-202ENST00000402314 SOS1Q07889 1333 aaPredicted RBP17.07■□□□□ 0.32
ATG3-202ENST00000402314 AXIN2Q9Y2T1 843 aa17.07■□□□□ 0.32
ATG3-202ENST00000402314 LRSAM1Q6UWE0 723 aa17.07■□□□□ 0.32
ATG3-202ENST00000402314 MARF1Q9Y4F3 1742 aaKnown RBP17.07■□□□□ 0.32
ATG3-202ENST00000402314 GCP02774 474 aa17.06■□□□□ 0.32
ATG3-202ENST00000402314 LARP6Q9BRS8 491 aaKnown RBP17.06■□□□□ 0.32
ATG3-202ENST00000402314 SASS6Q6UVJ0 657 aa17.06■□□□□ 0.32
ATG3-202ENST00000402314 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
ATG3-202ENST00000402314 CCDC39Q9UFE4 941 aa17.05■□□□□ 0.32
ATG3-202ENST00000402314 ZC3H6P61129 1189 aaKnown RBP17.05■□□□□ 0.32
ATG3-202ENST00000402314 SSH3Q8TE77 659 aa17.05■□□□□ 0.32
ATG3-202ENST00000402314 DNAAF4Q8WXU2 420 aa17.05■□□□□ 0.32
ATG3-202ENST00000402314 USP25Q9UHP3 1055 aa17.05■□□□□ 0.32
ATG3-202ENST00000402314 GADD45BO75293 160 aaPredicted RBP17.05■□□□□ 0.32
ATG3-202ENST00000402314 TMX3Q96JJ7 454 aa17.05■□□□□ 0.32
ATG3-202ENST00000402314 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
ATG3-202ENST00000402314 DYNC1I1O14576 645 aa17.04■□□□□ 0.32
ATG3-202ENST00000402314 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
ATG3-202ENST00000402314 CWF19L2Q2TBE0 894 aaKnown RBP17.04■□□□□ 0.32
ATG3-202ENST00000402314 BEND3Q5T5X7 828 aa17.04■□□□□ 0.32
ATG3-202ENST00000402314 RHPN1Q8TCX5 695 aa17.04■□□□□ 0.32
ATG3-202ENST00000402314 AIMP1Q12904 312 aaKnown RBP17.04■□□□□ 0.32
ATG3-202ENST00000402314 MAP7D2Q96T17 732 aa17.04■□□□□ 0.32
ATG3-202ENST00000402314 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
ATG3-202ENST00000402314 ANKRD24Q8TF21 1146 aa17.03■□□□□ 0.32
ATG3-202ENST00000402314 FAM208AQ9UK61 1670 aaKnown RBP17.03■□□□□ 0.32
ATG3-202ENST00000402314 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.32
ATG3-202ENST00000402314 CLEC17AQ6ZS10 378 aa17.02■□□□□ 0.32
ATG3-202ENST00000402314 PXDNQ92626 1479 aa17.02■□□□□ 0.32
ATG3-202ENST00000402314 KIAA2012Q0VF49 1180 aa17.02■□□□□ 0.32
ATG3-202ENST00000402314 SLC39A6Q13433 755 aa17.02■□□□□ 0.32
ATG3-202ENST00000402314 OS9Q13438 667 aaPredicted RBP17.02■□□□□ 0.32
ATG3-202ENST00000402314 LRRC37A3O60309 1634 aa17.02■□□□□ 0.31
ATG3-202ENST00000402314 MAP3K2Q9Y2U5 619 aa17.02■□□□□ 0.31
ATG3-202ENST00000402314 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
ATG3-202ENST00000402314 PLEKHO1Q53GL0 409 aaPredicted RBP17.01■□□□□ 0.31
ATG3-202ENST00000402314 STAP2Q9UGK3 403 aa17.01■□□□□ 0.31
ATG3-202ENST00000402314 ADCY9O60503 1353 aa17.01■□□□□ 0.31
ATG3-202ENST00000402314 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
ATG3-202ENST00000402314 HS1BP3Q53T59 392 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms