RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 EXOC5O00471 708 aa21.3■■□□□ 1
COL18A1-204ENST00000400337 CHRNA2Q15822 529 aa21.3■■□□□ 1
COL18A1-204ENST00000400337 GUCY1B3Q02153 619 aa21.3■■□□□ 1
COL18A1-204ENST00000400337 UBE3BQ7Z3V4 1068 aa21.3■■□□□ 1
COL18A1-204ENST00000400337 CCDC112Q8NEF3 446 aa21.3■■□□□ 1
COL18A1-204ENST00000400337 RALGAPBQ86X10 1494 aa21.29■■□□□ 1
COL18A1-204ENST00000400337 MAPKBP1O60336 1514 aa21.29■■□□□ 1
COL18A1-204ENST00000400337 SLC5A1P13866 664 aa21.29■■□□□ 1
COL18A1-204ENST00000400337 ANKIB1Q9P2G1 1089 aa21.29■■□□□ 1
COL18A1-204ENST00000400337 ZNF213O14771 459 aa21.29■■□□□ 1
COL18A1-204ENST00000400337 HMGB1P09429 215 aaKnown RBP21.29■■□□□ 1
COL18A1-204ENST00000400337 RBM10P98175 930 aaKnown RBP21.29■■□□□ 1
COL18A1-204ENST00000400337 POLR3DP05423 398 aaPredicted RBP21.29■■□□□ 1
COL18A1-204ENST00000400337 CCDC82Q8N4S0 544 aa21.29■■□□□ 1
COL18A1-204ENST00000400337 SCAND2PQ9GZW5 306 aaPredicted RBP21.29■■□□□ 1
COL18A1-204ENST00000400337 MKNK2Q9HBH9 465 aa21.29■■□□□ 1
COL18A1-204ENST00000400337 CEP131Q9UPN4 1083 aa21.29■■□□□ 1
COL18A1-204ENST00000400337 C8orf76Q96K31 380 aa21.28■■□□□ 1
COL18A1-204ENST00000400337 SMTNL1A8MU46 457 aa21.28■■□□□ 1
COL18A1-204ENST00000400337 NUP153P49790 1475 aaKnown RBP21.28■■□□□ 1
COL18A1-204ENST00000400337 ESPNB1AK53 854 aa21.28■■□□□ 1
COL18A1-204ENST00000400337 MPHOSPH10O00566 681 aaKnown RBP21.27■■□□□ 1
COL18A1-204ENST00000400337 GOLIM4O00461 696 aa21.27■■□□□ 1
COL18A1-204ENST00000400337 DZIP1Q86YF9 867 aaKnown RBP21.27■■□□□ 1
COL18A1-204ENST00000400337 TNPO1Q92973 898 aaKnown RBP21.27■■□□□ 1
COL18A1-204ENST00000400337 PDCL3Q9H2J4 239 aa21.27■■□□□ 1
COL18A1-204ENST00000400337 ZNF287Q9HBT7 754 aa21.27■■□□□ 1
COL18A1-204ENST00000400337 SKIDA1Q1XH10 827 aa21.27■■□□□ 1
COL18A1-204ENST00000400337 NOM1Q5C9Z4 860 aaKnown RBP21.27■■□□□ 1
COL18A1-204ENST00000400337 JARID2Q92833 1246 aaPredicted RBP21.27■■□□□ 1
COL18A1-204ENST00000400337 LUC7LQ9NQ29 371 aaKnown RBP21.27■■□□□ 1
COL18A1-204ENST00000400337 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.27■■□□□ 17e-7■■■■■ 154.6
COL18A1-204ENST00000400337 DMRT2Q9Y5R5 561 aa21.27■■□□□ 1
COL18A1-204ENST00000400337 ZNF76P36508 570 aa21.26■□□□□ 0.99
COL18A1-204ENST00000400337 CWC25Q9NXE8 425 aaPredicted RBP21.26■□□□□ 0.99
COL18A1-204ENST00000400337 DUOX2Q9NRD8 1548 aa21.26■□□□□ 0.99
COL18A1-204ENST00000400337 TTC22Q5TAA0 569 aa21.26■□□□□ 0.99
COL18A1-204ENST00000400337 MYO6Q9UM54 1294 aa21.26■□□□□ 0.99
COL18A1-204ENST00000400337 ASXL1Q8IXJ9 1541 aa21.26■□□□□ 0.99
COL18A1-204ENST00000400337 CCDC196A0A1B0GTZ2 297 aa21.26■□□□□ 0.99
COL18A1-204ENST00000400337 RANBP6O60518 1105 aaKnown RBP21.26■□□□□ 0.99
COL18A1-204ENST00000400337 SNRKQ9NRH2 765 aa21.26■□□□□ 0.99
COL18A1-204ENST00000400337 PRAG1Q86YV5 1406 aa21.26■□□□□ 0.99
COL18A1-204ENST00000400337 LDHAL6AQ6ZMR3 332 aa21.26■□□□□ 0.99
COL18A1-204ENST00000400337 MEIS3Q99687 375 aa21.26■□□□□ 0.99
COL18A1-204ENST00000400337 CFAP100Q494V2 611 aa21.25■□□□□ 0.99
COL18A1-204ENST00000400337 SYCP2Q9BX26 1530 aa21.25■□□□□ 0.99
COL18A1-204ENST00000400337 ARHGAP45Q92619 1136 aa21.25■□□□□ 0.99
COL18A1-204ENST00000400337 CCT2P78371 535 aaKnown RBP21.25■□□□□ 0.99
COL18A1-204ENST00000400337 PLEKHH1Q9ULM0 1364 aa21.25■□□□□ 0.99
COL18A1-204ENST00000400337 SNRPA1P09661 255 aaKnown RBP21.25■□□□□ 0.99
COL18A1-204ENST00000400337 SLC12A7Q9Y666 1083 aa21.25■□□□□ 0.99
COL18A1-204ENST00000400337 TMOD2Q9NZR1 351 aa21.24■□□□□ 0.99
COL18A1-204ENST00000400337 CCDC183Q5T5S1 534 aa21.24■□□□□ 0.99
COL18A1-204ENST00000400337 CTCFLQ8NI51 663 aaPredicted RBP21.24■□□□□ 0.99
COL18A1-204ENST00000400337 PCDHB15Q9Y5E8 787 aa21.24■□□□□ 0.99
COL18A1-204ENST00000400337 ASXL2Q76L83 1435 aa21.24■□□□□ 0.99
COL18A1-204ENST00000400337 A2MP01023 1474 aa21.24■□□□□ 0.99
COL18A1-204ENST00000400337 WWC2Q6AWC2 1192 aa21.23■□□□□ 0.99
COL18A1-204ENST00000400337 FBXO3Q9UK99 471 aa21.23■□□□□ 0.99
COL18A1-204ENST00000400337 GOLGA8BA8MQT2 603 aa21.23■□□□□ 0.99
COL18A1-204ENST00000400337 RDXP35241 583 aaKnown RBP21.23■□□□□ 0.99
COL18A1-204ENST00000400337 HDAC1Q13547 482 aaPredicted RBP21.23■□□□□ 0.99
COL18A1-204ENST00000400337 TEX13AQ9BXU3 409 aaPredicted RBP21.23■□□□□ 0.99
COL18A1-204ENST00000400337 SEC63Q9UGP8 760 aaKnown RBP21.23■□□□□ 0.99
COL18A1-204ENST00000400337 PPIP5K1Q6PFW1 1433 aa21.23■□□□□ 0.99
COL18A1-204ENST00000400337 IQCA1Q86XH1 822 aa21.23■□□□□ 0.99
COL18A1-204ENST00000400337 NGLY1Q96IV0 654 aa21.23■□□□□ 0.99
COL18A1-204ENST00000400337 CHPF2Q9P2E5 772 aa21.23■□□□□ 0.99
COL18A1-204ENST00000400337 TTC21AQ8NDW8 1320 aa21.23■□□□□ 0.99
COL18A1-204ENST00000400337 CADPS2Q86UW7 1296 aa21.23■□□□□ 0.99
COL18A1-204ENST00000400337 IFIT3O14879 490 aaKnown RBP21.22■□□□□ 0.99
COL18A1-204ENST00000400337 NUCB1Q02818 461 aa21.22■□□□□ 0.99
COL18A1-204ENST00000400337 ANKRD13DQ6ZTN6 518 aa21.22■□□□□ 0.99
COL18A1-204ENST00000400337 CCDC181Q5TID7 509 aa21.22■□□□□ 0.99
COL18A1-204ENST00000400337 C8orf58Q8NAV2 365 aa21.22■□□□□ 0.99
COL18A1-204ENST00000400337 ZRANB1Q9UGI0 708 aa21.22■□□□□ 0.99
COL18A1-204ENST00000400337 CRACR2BQ8N4Y2 399 aaPredicted RBP21.22■□□□□ 0.99
COL18A1-204ENST00000400337 RHPN1Q8TCX5 695 aa21.22■□□□□ 0.99
COL18A1-204ENST00000400337 NUP160Q12769 1436 aa21.22■□□□□ 0.99
COL18A1-204ENST00000400337 TBC1D32Q96NH3 1257 aa21.22■□□□□ 0.99
COL18A1-204ENST00000400337 GDPD2Q9HCC8 539 aa21.22■□□□□ 0.99
COL18A1-204ENST00000400337 EIF5P55010 431 aaKnown RBP21.21■□□□□ 0.99
COL18A1-204ENST00000400337 RNF41Q9H4P4 317 aaPredicted RBP21.21■□□□□ 0.99
COL18A1-204ENST00000400337 GOLGA8AA7E2F4 631 aa21.2■□□□□ 0.98
COL18A1-204ENST00000400337 AXDND1Q5T1B0 1012 aaPredicted RBP21.2■□□□□ 0.98
COL18A1-204ENST00000400337 GJB2P29033 226 aa21.2■□□□□ 0.98
COL18A1-204ENST00000400337 UHRF1BP1LA0JNW5 1464 aa21.2■□□□□ 0.98
COL18A1-204ENST00000400337 EIF4A2Q14240 407 aaKnown RBP21.2■□□□□ 0.98
COL18A1-204ENST00000400337 ZNF444Q8N0Y2 327 aaPredicted RBP21.2■□□□□ 0.98
COL18A1-204ENST00000400337 ANO10Q9NW15 660 aa21.2■□□□□ 0.98
COL18A1-204ENST00000400337 PARD3Q8TEW0 1356 aa21.2■□□□□ 0.98
COL18A1-204ENST00000400337 POLKQ9UBT6 870 aa21.2■□□□□ 0.98
COL18A1-204ENST00000400337 TRAPPC8Q9Y2L5 1435 aa21.2■□□□□ 0.98
COL18A1-204ENST00000400337 HAND2P61296 217 aa21.19■□□□□ 0.98
COL18A1-204ENST00000400337 KLHL10Q6JEL2 608 aa21.19■□□□□ 0.98
COL18A1-204ENST00000400337 TXLNBQ8N3L3 684 aa21.19■□□□□ 0.98
COL18A1-204ENST00000400337 SDSP20132 328 aa21.19■□□□□ 0.98
COL18A1-204ENST00000400337 CKAP2LQ8IYA6 745 aa21.19■□□□□ 0.98
COL18A1-204ENST00000400337 RPGRQ92834 1020 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms