RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 ANKRD7Q92527 254 aa11.6□□□□□ -0.55
PTPRM-203ENST00000400060 TCOF1Q13428 1488 aaKnown RBP11.6□□□□□ -0.55
PTPRM-203ENST00000400060 UHRF1BP1Q6BDS2 1440 aa11.6□□□□□ -0.55
PTPRM-203ENST00000400060 CDC25BP30305 580 aa11.6□□□□□ -0.55
PTPRM-203ENST00000400060 PIP4K2BP78356 416 aa11.6□□□□□ -0.55
PTPRM-203ENST00000400060 LRRFIP1Q32MZ4 808 aaKnown RBP11.59□□□□□ -0.55
PTPRM-203ENST00000400060 PDRG1Q9NUG6 133 aa11.59□□□□□ -0.55
PTPRM-203ENST00000400060 NUP160Q12769 1436 aa11.59□□□□□ -0.55
PTPRM-203ENST00000400060 GPR161Q8N6U8 529 aaKnown RBP11.59□□□□□ -0.55
PTPRM-203ENST00000400060 TOP1P11387 765 aaKnown RBP11.59□□□□□ -0.55
PTPRM-203ENST00000400060 CKAP4Q07065 602 aaKnown RBP11.59□□□□□ -0.55
PTPRM-203ENST00000400060 A0A087WUV0 522 aaPredicted RBP11.59□□□□□ -0.55
PTPRM-203ENST00000400060 INPP5BP32019 993 aa11.59□□□□□ -0.55
PTPRM-203ENST00000400060 TYRO3Q06418 890 aa11.59□□□□□ -0.55
PTPRM-203ENST00000400060 TRIM29Q14134 588 aa11.59□□□□□ -0.55
PTPRM-203ENST00000400060 CCDC158Q5M9N0 1113 aa11.59□□□□□ -0.55
PTPRM-203ENST00000400060 AFAP1L1Q8TED9 768 aa11.59□□□□□ -0.55
PTPRM-203ENST00000400060 SNAPC4Q5SXM2 1469 aa11.58□□□□□ -0.55
PTPRM-203ENST00000400060 CLSTN1O94985 981 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 MMS22LQ6ZRQ5 1243 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 KIAA1524Q8TCG1 905 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 ARHGAP45Q92619 1136 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 SUDS3Q9H7L9 328 aaPredicted RBP11.58□□□□□ -0.56
PTPRM-203ENST00000400060 DNAI1Q9UI46 699 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 CDK13Q14004 1512 aaKnown RBP11.58□□□□□ -0.56
PTPRM-203ENST00000400060 RNF187Q5TA31 235 aaPredicted RBP11.58□□□□□ -0.56
PTPRM-203ENST00000400060 CCDC47Q96A33 483 aaKnown RBP11.58□□□□□ -0.56
PTPRM-203ENST00000400060 CTNNA3Q9UI47 895 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 CCDC69A6NI79 296 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 ACTN2P35609 894 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 GCC2Q8IWJ2 1684 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 EPB41L2O43491 1005 aaKnown RBP11.58□□□□□ -0.56
PTPRM-203ENST00000400060 ZNF75DP51815 510 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 HNRNPH2P55795 449 aaKnown RBP11.58□□□□□ -0.56
PTPRM-203ENST00000400060 ANO6Q4KMQ2 910 aa11.58□□□□□ -0.56
PTPRM-203ENST00000400060 FAM177BA6PVY3 158 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 SATB1Q01826 763 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 RBBP5Q15291 538 aaKnown RBP11.57□□□□□ -0.56
PTPRM-203ENST00000400060 SLC4A10Q6U841 1118 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.57□□□□□ -0.561e-7■■□□□ 14.3
PTPRM-203ENST00000400060 SPATS2LQ9NUQ6 558 aaKnown RBP11.57□□□□□ -0.56
PTPRM-203ENST00000400060 SRGAP3O43295 1099 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 SMC1AQ14683 1233 aaKnown RBP11.57□□□□□ -0.56
PTPRM-203ENST00000400060 CCDC38Q502W7 563 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 MUM1L1Q5H9M0 696 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 MIPOL1Q8TD10 442 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 SPATA31E1Q6ZUB1 1445 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 F13A1P00488 732 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 SH3BGRP55822 239 aaPredicted RBP11.57□□□□□ -0.56
PTPRM-203ENST00000400060 KIF4BQ2VIQ3 1234 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 GIMAP6Q6P9H5 292 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 GIGYF2Q6Y7W6 1299 aaKnown RBP11.57□□□□□ -0.56
PTPRM-203ENST00000400060 SECISBP2LQ93073 1101 aaKnown RBP11.57□□□□□ -0.56
PTPRM-203ENST00000400060 CCT4P50991 539 aaKnown RBP11.57□□□□□ -0.56
PTPRM-203ENST00000400060 KRT32Q14532 448 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 STK38Q15208 465 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 MPHOSPH8Q99549 860 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 TMEM63CQ9P1W3 806 aa11.57□□□□□ -0.56
PTPRM-203ENST00000400060 ANKRD18BA2A2Z9 1011 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 RAD51AP2Q09MP3 1159 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 CCDC30Q5VVM6 783 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 EHBP1Q8NDI1 1231 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 FBXO18Q8NFZ0 1043 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 TEX14Q8IWB6 1497 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 EFCAB8A8MWE9 144 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 MYO1CO00159 1063 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 ZKSCAN8Q15776 578 aaPredicted RBP11.56□□□□□ -0.56
PTPRM-203ENST00000400060 TMC6Q7Z403 805 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 TICAM2Q86XR7 235 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 FAM76AQ8TAV0 307 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTPRM-203ENST00000400060 ABCC5O15440 1437 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 CTAGE15A4D2H0 777 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 DHX16O60231 1041 aaKnown RBP11.56□□□□□ -0.56
PTPRM-203ENST00000400060 CTAGE8P0CG41 777 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 CLNS1AP54105 237 aaKnown RBP11.56□□□□□ -0.56
PTPRM-203ENST00000400060 EVCP57679 992 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 CTAGE6Q86UF2 777 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 CTAGE4Q8IX94 777 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 EID1Q9Y6B2 187 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 NPC1L1Q9UHC9 1359 aa11.56□□□□□ -0.56
PTPRM-203ENST00000400060 NEDD9Q14511 834 aa11.55□□□□□ -0.56
PTPRM-203ENST00000400060 CAMK4Q16566 473 aa11.55□□□□□ -0.56
PTPRM-203ENST00000400060 ZNHIT6Q9NWK9 470 aaKnown RBP11.55□□□□□ -0.56
PTPRM-203ENST00000400060 ABCC2Q92887 1545 aa11.55□□□□□ -0.56
PTPRM-203ENST00000400060 COG3Q96JB2 828 aa11.55□□□□□ -0.56
PTPRM-203ENST00000400060 UNC13AQ9UPW8 1703 aa11.55□□□□□ -0.56
PTPRM-203ENST00000400060 VEZTQ9HBM0 779 aa11.55□□□□□ -0.56
PTPRM-203ENST00000400060 MED4Q9NPJ6 270 aa11.55□□□□□ -0.56
PTPRM-203ENST00000400060 LUC7LQ9NQ29 371 aaKnown RBP11.55□□□□□ -0.56
PTPRM-203ENST00000400060 GNG11P61952 73 aa11.55□□□□□ -0.56
PTPRM-203ENST00000400060 CFAP100Q494V2 611 aa11.55□□□□□ -0.56
PTPRM-203ENST00000400060 TRIM27P14373 513 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 NCBP1Q09161 790 aaKnown RBP11.54□□□□□ -0.56
PTPRM-203ENST00000400060 CCDC181Q5TID7 509 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 CCDC121Q6ZUS5 278 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 ZSCAN16Q9H4T2 348 aaPredicted RBP11.54□□□□□ -0.56
PTPRM-203ENST00000400060 KDM5DQ9BY66 1539 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 NEBLO76041 1014 aa11.54□□□□□ -0.56
PTPRM-203ENST00000400060 SLC8A1P32418 973 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms