RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 ATP8B1O43520 1251 aa10.29□□□□□ -0.76
RETREG1-202ENST00000399793 MAP2K1Q02750 393 aaPredicted RBP10.29□□□□□ -0.76
RETREG1-202ENST00000399793 TYRO3Q06418 890 aa10.29□□□□□ -0.76
RETREG1-202ENST00000399793 FOXR1Q6PIV2 292 aa10.29□□□□□ -0.76
RETREG1-202ENST00000399793 LEKR1Q6ZMV7 388 aa10.29□□□□□ -0.76
RETREG1-202ENST00000399793 CCAR2Q8N163 923 aaKnown RBP10.29□□□□□ -0.76
RETREG1-202ENST00000399793 CCDC34Q96HJ3 373 aa10.29□□□□□ -0.76
RETREG1-202ENST00000399793 ORC3Q9UBD5 711 aaPredicted RBP10.29□□□□□ -0.76
RETREG1-202ENST00000399793 PPRC1Q5VV67 1664 aaKnown RBP10.29□□□□□ -0.76
RETREG1-202ENST00000399793 NUP160Q12769 1436 aa10.29□□□□□ -0.76
RETREG1-202ENST00000399793 ERC2O15083 957 aa10.29□□□□□ -0.76
RETREG1-202ENST00000399793 TBC1D8O95759 1140 aa10.29□□□□□ -0.76
RETREG1-202ENST00000399793 CCDC93Q567U6 631 aa10.29□□□□□ -0.76
RETREG1-202ENST00000399793 RAI14Q9P0K7 980 aa10.29□□□□□ -0.76
RETREG1-202ENST00000399793 RNF17Q9BXT8 1623 aaKnown RBP10.28□□□□□ -0.76
RETREG1-202ENST00000399793 ANKRD65E5RJM6 399 aa10.28□□□□□ -0.76
RETREG1-202ENST00000399793 CORO7P57737 925 aa10.28□□□□□ -0.76
RETREG1-202ENST00000399793 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.28□□□□□ -0.76
RETREG1-202ENST00000399793 KIF2AO00139 706 aaPredicted RBP10.28□□□□□ -0.76
RETREG1-202ENST00000399793 ZSCAN22P10073 491 aaPredicted RBP10.28□□□□□ -0.76
RETREG1-202ENST00000399793 ANO6Q4KMQ2 910 aa10.28□□□□□ -0.76
RETREG1-202ENST00000399793 OTUD7AQ8TE49 926 aaPredicted RBP10.28□□□□□ -0.76
RETREG1-202ENST00000399793 ZSCAN16Q9H4T2 348 aaPredicted RBP10.28□□□□□ -0.76
RETREG1-202ENST00000399793 MED14O60244 1454 aa10.28□□□□□ -0.76
RETREG1-202ENST00000399793 LRCH2Q5VUJ6 765 aa10.27□□□□□ -0.76
RETREG1-202ENST00000399793 UBXN4Q92575 508 aa10.27□□□□□ -0.76
RETREG1-202ENST00000399793 PDRG1Q9NUG6 133 aa10.27□□□□□ -0.76
RETREG1-202ENST00000399793 HMGXB3Q12766 1538 aa10.27□□□□□ -0.77
RETREG1-202ENST00000399793 CCDC196A0A1B0GTZ2 297 aa10.27□□□□□ -0.77
RETREG1-202ENST00000399793 NEMFO60524 1076 aa10.27□□□□□ -0.77
RETREG1-202ENST00000399793 MCCP23508 829 aa10.27□□□□□ -0.77
RETREG1-202ENST00000399793 CAMK4Q16566 473 aa10.27□□□□□ -0.77
RETREG1-202ENST00000399793 MAP3K11Q16584 847 aa10.27□□□□□ -0.77
RETREG1-202ENST00000399793 SYTL4Q96C24 671 aaPredicted RBP10.27□□□□□ -0.77
RETREG1-202ENST00000399793 RTL1A6NKG5 1358 aa10.27□□□□□ -0.77
RETREG1-202ENST00000399793 ABCC11Q96J66 1382 aa10.27□□□□□ -0.77
RETREG1-202ENST00000399793 PPP2R5AQ15172 486 aa10.27□□□□□ -0.77
RETREG1-202ENST00000399793 IQGAP1P46940 1657 aa10.26□□□□□ -0.77
RETREG1-202ENST00000399793 CPP00450 1065 aa10.26□□□□□ -0.77
RETREG1-202ENST00000399793 CCZ1BP86790 482 aa10.26□□□□□ -0.77
RETREG1-202ENST00000399793 CCZ1P86791 482 aaPredicted RBP10.26□□□□□ -0.77
RETREG1-202ENST00000399793 SNW1Q13573 536 aaKnown RBP10.26□□□□□ -0.77
RETREG1-202ENST00000399793 GORABQ5T7V8 394 aa10.26□□□□□ -0.77
RETREG1-202ENST00000399793 RPAINQ86UA6 219 aa10.26□□□□□ -0.77
RETREG1-202ENST00000399793 TDRD7Q8NHU6 1098 aaKnown RBP10.26□□□□□ -0.77
RETREG1-202ENST00000399793 PALD1Q9ULE6 856 aa10.26□□□□□ -0.77
RETREG1-202ENST00000399793 PPP1R12AO14974 1030 aaPredicted RBP10.26□□□□□ -0.77
RETREG1-202ENST00000399793 CEP152O94986 1710 aa10.26□□□□□ -0.77
RETREG1-202ENST00000399793 CCDC69A6NI79 296 aa10.25□□□□□ -0.77
RETREG1-202ENST00000399793 CDC25BP30305 580 aa10.25□□□□□ -0.77
RETREG1-202ENST00000399793 CC2D1AQ6P1N0 951 aaPredicted RBP10.25□□□□□ -0.77
RETREG1-202ENST00000399793 CKAP2LQ8IYA6 745 aa10.25□□□□□ -0.77
RETREG1-202ENST00000399793 CHMP3Q9Y3E7 222 aa10.25□□□□□ -0.77
RETREG1-202ENST00000399793 ATAD2Q6PL18 1390 aa10.25□□□□□ -0.77
RETREG1-202ENST00000399793 PLA2R1Q13018 1463 aa10.25□□□□□ -0.77
RETREG1-202ENST00000399793 SEMA3FQ13275 785 aa10.25□□□□□ -0.77
RETREG1-202ENST00000399793 DNAAF4Q8WXU2 420 aa10.25□□□□□ -0.77
RETREG1-202ENST00000399793 NUP62CLQ9H1M0 184 aa10.25□□□□□ -0.77
RETREG1-202ENST00000399793 SH3BP1Q9Y3L3 701 aa10.25□□□□□ -0.77
RETREG1-202ENST00000399793 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
RETREG1-202ENST00000399793 F13A1P00488 732 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 DNM1Q05193 864 aaKnown RBP10.24□□□□□ -0.77
RETREG1-202ENST00000399793 TTLL5Q6EMB2 1281 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 MORC1Q86VD1 984 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 UPF3BQ9BZI7 483 aaKnown RBP10.24□□□□□ -0.77
RETREG1-202ENST00000399793 H3BQF6 201 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 STX6O43752 255 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 CWC27Q6UX04 472 aaKnown RBP10.24□□□□□ -0.77
RETREG1-202ENST00000399793 EPC1Q9H2F5 836 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 KCND1Q9NSA2 647 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 RGS12O14924 1447 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 RPS6KA5O75582 802 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 SYT1P21579 422 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 ATP6V1DQ9Y5K8 247 aa10.24□□□□□ -0.77
RETREG1-202ENST00000399793 U2AF1L5P0DN76 240 aaPredicted RBP10.23□□□□□ -0.77
RETREG1-202ENST00000399793 ZNF165P49910 485 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 MNAT1P51948 309 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 U2AF1Q01081 240 aaKnown RBP eCLIP10.23□□□□□ -0.77
RETREG1-202ENST00000399793 TRDNQ13061 729 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 EFCAB13Q8IY85 973 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 DCTPP1Q9H773 170 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 SCP2P22307 547 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 MTHFSP49914 203 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 BIRC2Q13490 618 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 ALDH1L2Q3SY69 923 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 MAP9Q49MG5 647 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 CCDC158Q5M9N0 1113 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 TADA2BQ86TJ2 420 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 USP16Q9Y5T5 823 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 GPATCH8Q9UKJ3 1502 aaKnown RBP10.23□□□□□ -0.77
RETREG1-202ENST00000399793 C9orf84Q5VXU9 1444 aa10.23□□□□□ -0.77
RETREG1-202ENST00000399793 LIG1P18858 919 aa10.22□□□□□ -0.77
RETREG1-202ENST00000399793 ZRSR1Q15695 479 aaKnown RBP10.22□□□□□ -0.77
RETREG1-202ENST00000399793 MICALL1Q8N3F8 863 aa10.22□□□□□ -0.77
RETREG1-202ENST00000399793 FUT8Q9BYC5 575 aa10.22□□□□□ -0.77
RETREG1-202ENST00000399793 TNMDQ9H2S6 317 aa10.22□□□□□ -0.77
RETREG1-202ENST00000399793 TRIM35Q9UPQ4 493 aa10.22□□□□□ -0.77
RETREG1-202ENST00000399793 TADA3O75528 432 aa10.22□□□□□ -0.77
RETREG1-202ENST00000399793 ZNF428Q96B54 188 aa10.22□□□□□ -0.77
RETREG1-202ENST00000399793 DNAJC25Q9H1X3 360 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms