RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 TBC1D2BQ9UPU7 963 aa9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 RBM10P98175 930 aaKnown RBP9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 FSD1Q9BTV5 496 aa9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 EBAG9O00559 213 aa9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 CASTP20810 708 aaKnown RBP9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 CUL4BQ13620 913 aa9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 ATP5DP30049 168 aa9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 PCK1P35558 622 aa9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 LRRC23Q53EV4 343 aaPredicted RBP9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 MAATS1Q7Z4T9 603 aa9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 TERF2IPQ9NYB0 399 aa9.88□□□□□ -0.83
CACNA1C-220ENST00000399655 CCDC65Q8IXS2 484 aa9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 SCLT1Q96NL6 688 aa9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 BCL11BQ9C0K0 894 aaPredicted RBP9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 NBPF1Q3BBV0 1214 aa9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 FAM177A1Q8N128 213 aaPredicted RBP9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 SPAG5Q96R06 1193 aa9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 SAMD15Q9P1V8 674 aa9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 WDR46O15213 610 aaKnown RBP9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 B4GALNT4Q76KP1 1039 aa9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 TXNDC16Q9P2K2 825 aa9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 Q9H521 79 aa9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 ANGPT1Q15389 498 aa9.87□□□□□ -0.83
CACNA1C-220ENST00000399655 AP1ARQ63HQ0 302 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 C1orf141Q5JVX7 400 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 SPC24Q8NBT2 197 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 CACNA2D4Q7Z3S7 1137 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 ZHX3Q9H4I2 956 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 ANKFY1Q9P2R3 1169 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 DDX19BQ9UMR2 479 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 TBC1D31Q96DN5 1066 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 HAUS2Q9NVX0 235 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 TTC5Q8N0Z6 440 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 OTUD6BQ8N6M0 293 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 WASF1Q92558 559 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 CLIP1P30622 1438 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 NEDD9Q14511 834 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 FAN1Q9Y2M0 1017 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 CCDC69A6NI79 296 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 VPS52Q8N1B4 723 aa9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 HELBQ8NG08 1087 aaPredicted RBP9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.86□□□□□ -0.83
CACNA1C-220ENST00000399655 GTF2F1P35269 517 aaKnown RBP eCLIP9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 UIMC1Q96RL1 719 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 RAB34Q9BZG1 259 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 NLRP5P59047 1200 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 KIAA0753Q2KHM9 967 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 CCDC40Q4G0X9 1142 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 CNTROBQ8N137 903 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 MAN1A2O60476 641 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 POTEDQ86YR6 584 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 NUCKS1Q9H1E3 243 aaKnown RBP9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 NFKBIBQ15653 356 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 JAKMIP1Q96N16 626 aaKnown RBP9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 FNBP4Q8N3X1 1017 aaPredicted RBP9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 UPF3BQ9BZI7 483 aaKnown RBP9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 CROCCQ5TZA2 2017 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 CEP104O60308 925 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 UTP14CQ5TAP6 766 aaKnown RBP9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 ATP6V0A1Q93050 837 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 ZHX1Q9UKY1 873 aaPredicted RBP9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 CRCPO75575 148 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 GIPC1O14908 333 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 HSP90AA5PQ58FG0 334 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 CCDC124Q96CT7 223 aaKnown RBP9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 SPATA32Q96LK8 384 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 CCNB3Q8WWL7 1395 aa9.85□□□□□ -0.83
CACNA1C-220ENST00000399655 MPHOSPH6Q99547 160 aaKnown RBP9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 KRT85P78386 507 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 CETN3O15182 167 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 SMIM24O75264 130 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 CTAGE15A4D2H0 777 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 KIF6Q6ZMV9 814 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 CCDC171Q6TFL3 1326 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 ME1P48163 572 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 GNL3LQ9NVN8 582 aaKnown RBP9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 USP25Q9UHP3 1055 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 GSDMDP57764 484 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 FOXD1Q16676 465 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 KRT222Q8N1A0 295 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 DRC3Q9H069 523 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 RASSF4Q9H2L5 321 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 NGEFQ8N5V2 710 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 PYGLP06737 847 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 LRCH2Q5VUJ6 765 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 TUBBP07437 444 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 WDR78Q5VTH9 848 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 SRGAP1Q7Z6B7 1085 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 SELENOOQ9BVL4 669 aa9.84□□□□□ -0.83
CACNA1C-220ENST00000399655 HMGB2P26583 209 aaKnown RBP9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 ZKSCAN2Q63HK3 967 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 ARFGAP2Q8N6H7 521 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 PHAXQ9H814 394 aaKnown RBP9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 SOX12O15370 315 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 CCDC62Q6P9F0 684 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 ATRIPQ8WXE1 791 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 WDR33Q9C0J8 1336 aaKnown RBP9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 STXBP4Q6ZWJ1 553 aa9.83□□□□□ -0.84
CACNA1C-220ENST00000399655 LUC7L3O95232 432 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms