RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 SLC12A7Q9Y666 1083 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 RTEL1-TNFRSF6BF6WH68 1400 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 SPECC1Q5M775 1068 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 CFAP70Q5T0N1 1121 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 C8orf76Q96K31 380 aa14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 PUS7Q96PZ0 661 aaKnown RBP14.24□□□□□ -0.13
CACNA1C-219ENST00000399649 SYNJ2O15056 1496 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 NLRP5P59047 1200 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 TMCO5BA8MYB1 307 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 PLEKHH1Q9ULM0 1364 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 PRKCSHP14314 528 aaPredicted RBP14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 SPECC1LQ69YQ0 1117 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 ANKLE2Q86XL3 938 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 SLF2Q8IX21 1173 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 CFAP57Q96MR6 1250 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 ANKRD30BQ9BXX2 1392 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 CTAGE5O15320 804 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 HLTFQ14527 1009 aaKnown RBP eCLIP14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 ZNF644Q9H582 1327 aaPredicted RBP14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 POGZQ7Z3K3 1410 aa14.23□□□□□ -0.13
CACNA1C-219ENST00000399649 PRG4Q92954 1404 aaPredicted RBP14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 GNAT3A8MTJ3 354 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 MCM4P33991 863 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 WDR78Q5VTH9 848 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 CTR9Q6PD62 1173 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 RPAP2Q8IXW5 612 aaPredicted RBP14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 MTIF2P46199 727 aaKnown RBP14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 AMPD3Q01432 767 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 STXBP4Q6ZWJ1 553 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 FAM114A1Q8IWE2 563 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 CNNM3Q8NE01 707 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 KIF1BPQ96EK5 621 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 CALML4Q96GE6 196 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 PRPF40BQ6NWY9 871 aaKnown RBP14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 SREK1Q8WXA9 508 aaKnown RBP14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 RANBP6O60518 1105 aaKnown RBP14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 IQCA1Q86XH1 822 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 CABP1Q9NZU7 370 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 ESPNB1AK53 854 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 SLC5A1P13866 664 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 MRPS9P82933 396 aaKnown RBP14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 LRRC45Q96CN5 670 aa14.22□□□□□ -0.13
CACNA1C-219ENST00000399649 CCDC194A0A1B0GVG4 234 aa14.21□□□□□ -0.13
CACNA1C-219ENST00000399649 MAP3K12Q12852 859 aa14.21□□□□□ -0.13
CACNA1C-219ENST00000399649 MAATS1Q7Z4T9 603 aa14.21□□□□□ -0.13
CACNA1C-219ENST00000399649 IL27Q8NEV9 243 aa14.21□□□□□ -0.13
CACNA1C-219ENST00000399649 SCAND2PQ9GZW5 306 aaPredicted RBP14.21□□□□□ -0.13
CACNA1C-219ENST00000399649 TTC21AQ8NDW8 1320 aa14.21□□□□□ -0.13
CACNA1C-219ENST00000399649 PAXIP1Q6ZW49 1069 aaPredicted RBP14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 CPLX3Q8WVH0 158 aa14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 PRDM11Q9NQV5 511 aa14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 POLR3GO15318 223 aaPredicted RBP14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 PRC1O43663 620 aa14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 CBX1P83916 185 aa14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 PRPF4BQ13523 1007 aaKnown RBP14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 CCDC40Q4G0X9 1142 aa14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 ZSCAN30Q86W11 494 aa14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 PPP1R14CQ8TAE6 165 aa14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 DDX12PQ92771 950 aa14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 SH2B1Q9NRF2 756 aaPredicted RBP14.21□□□□□ -0.14
CACNA1C-219ENST00000399649 GRIN2BQ13224 1484 aa14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 CATIPQ7Z7H3 387 aa14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 BACH2Q9BYV9 841 aa14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 RNF41Q9H4P4 317 aaPredicted RBP14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 IKBKGQ9Y6K9 419 aa14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 ZNF213O14771 459 aa14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 GLRX3O76003 335 aaKnown RBP14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 SMARCC1Q92922 1105 aaPredicted RBP14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 PUF60Q9UHX1 559 aaKnown RBP14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 GOLGA8AA7E2F4 631 aa14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 GOLGA8BA8MQT2 603 aa14.2□□□□□ -0.14
CACNA1C-219ENST00000399649 SYCP3Q8IZU3 236 aa14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 BBXQ8WY36 941 aaPredicted RBP14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 CALCOCO1Q9P1Z2 691 aa14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 FERMT3Q86UX7 667 aa14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 CCDC12Q8WUD4 166 aaPredicted RBP14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 MX1P20591 662 aa14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 GUCY1B3Q02153 619 aa14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 AFAP1Q8N556 730 aa14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 BMS1Q14692 1282 aaKnown RBP14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 SPTY2D1Q68D10 685 aaPredicted RBP14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 MYD88Q99836 296 aa14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 IFI16Q16666 785 aaKnown RBP14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 RPGRQ92834 1020 aaKnown RBP14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 TMOD3Q9NYL9 352 aa14.19□□□□□ -0.14
CACNA1C-219ENST00000399649 NOP2P46087 812 aaKnown RBP14.18□□□□□ -0.14
CACNA1C-219ENST00000399649 CEP112Q8N8E3 955 aa14.18□□□□□ -0.14
CACNA1C-219ENST00000399649 NEMFO60524 1076 aa14.18□□□□□ -0.14
CACNA1C-219ENST00000399649 ACTN2P35609 894 aa14.18□□□□□ -0.14
CACNA1C-219ENST00000399649 MPHOSPH6Q99547 160 aaKnown RBP14.18□□□□□ -0.14
CACNA1C-219ENST00000399649 PYM1Q9BRP8 204 aaKnown RBP14.18□□□□□ -0.14
CACNA1C-219ENST00000399649 AKNAQ7Z591 1439 aa14.18□□□□□ -0.14
CACNA1C-219ENST00000399649 GSDMDP57764 484 aa14.18□□□□□ -0.14
CACNA1C-219ENST00000399649 TCERG1LQ5VWI1 586 aa14.18□□□□□ -0.14
CACNA1C-219ENST00000399649 HSF2BPO75031 334 aa14.17□□□□□ -0.14
CACNA1C-219ENST00000399649 RRS1Q15050 365 aaKnown RBP14.17□□□□□ -0.14
CACNA1C-219ENST00000399649 A0A1W2PRG0 241 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms