RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 RFC1P35251 1148 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 TXLNBQ8N3L3 684 aa12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 AIDAQ96BJ3 306 aa12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 GTF2F1P35269 517 aaKnown RBP eCLIP12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 TAF12Q16514 161 aa12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 KRT28Q7Z3Y7 464 aa12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 CADPS2Q86UW7 1296 aa12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 SIRT1Q96EB6 747 aa12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 MYBBP1AQ9BQG0 1328 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 SYNJ2O15056 1496 aa12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 BAG6P46379 1132 aa12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 KIF20AO95235 890 aa12.89□□□□□ -0.35
CACNA1C-217ENST00000399641 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 LPXNO60711 386 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 EAPPQ56P03 285 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 DPH6Q7L8W6 267 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 PFDN4Q9NQP4 134 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 ODF2LQ9ULJ1 636 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 RAB3GAP2Q9H2M9 1393 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 PLS1Q14651 629 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 KIF3CO14782 793 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 HIP1O00291 1037 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 CAMK4Q16566 473 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 SPECC1Q5M775 1068 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 NBPF5PQ86XG9 351 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 ZNF396Q96N95 335 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 SLC52A1Q9NWF4 448 aa12.88□□□□□ -0.35
CACNA1C-217ENST00000399641 CETN2P41208 172 aa12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 VEZTQ9HBM0 779 aa12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 GJC1P36383 396 aa12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 HLTFQ14527 1009 aaKnown RBP eCLIP12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 MAP7D1Q3KQU3 841 aa12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 ZHX1Q9UKY1 873 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 FAM114A2Q9NRY5 505 aa12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 NOD1Q9Y239 953 aa12.87□□□□□ -0.35
CACNA1C-217ENST00000399641 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 MAFGO15525 162 aa12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 SLU7O95391 586 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 KLHL10Q6JEL2 608 aa12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 ATP2B3Q16720 1220 aa12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 CPLX3Q8WVH0 158 aa12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 CWC25Q9NXE8 425 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 NOL7Q9UMY1 257 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 FYCO1Q9BQS8 1478 aa12.86□□□□□ -0.35
CACNA1C-217ENST00000399641 CEP57L1Q8IYX8 460 aa12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 SLC4A8Q2Y0W8 1093 aa12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 DACH1Q9UI36 760 aa12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 ZNF397Q8NF99 534 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 FRMD4BQ9Y2L6 1034 aa12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 ARHGAP29Q52LW3 1261 aa12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 NOP9Q86U38 636 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
CACNA1C-217ENST00000399641 SPA17Q15506 151 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 FSD2A1L4K1 749 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 GTF2A1P52655 376 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 HSPA2P54652 639 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 CENPQQ7L2Z9 268 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 WDR66Q8TBY9 1149 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 DIXDC1Q155Q3 683 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 MTERF4Q7Z6M4 381 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 PDCD7Q8N8D1 485 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 MIPOL1Q8TD10 442 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
CACNA1C-217ENST00000399641 SETDB2Q96T68 719 aa12.83□□□□□ -0.35
CACNA1C-217ENST00000399641 C11orf95C9JLR9 678 aaPredicted RBP12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 GPTP24298 496 aa12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 KIF22Q14807 665 aa12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 CFAP70Q5T0N1 1121 aa12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 TMEM110-MUSTN1A8MSY1 372 aa12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 F8W031 263 aaPredicted RBP12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 SLC5A1P13866 664 aa12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 MNAT1P51948 309 aa12.83□□□□□ -0.36
CACNA1C-217ENST00000399641 PPP1R42Q7Z4L9 355 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms