RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 RFC1P35251 1148 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 TXLNBQ8N3L3 684 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 AIDAQ96BJ3 306 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 GTF2F1P35269 517 aaKnown RBP eCLIP12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 TAF12Q16514 161 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 KRT28Q7Z3Y7 464 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 CADPS2Q86UW7 1296 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 SIRT1Q96EB6 747 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 TNMDQ9H2S6 317 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 MYBBP1AQ9BQG0 1328 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 SYNJ2O15056 1496 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 BAG6P46379 1132 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 KIF20AO95235 890 aa12.89□□□□□ -0.35
CACNA1C-208ENST00000399601 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 LPXNO60711 386 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 EAPPQ56P03 285 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 DPH6Q7L8W6 267 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 PFDN4Q9NQP4 134 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 ODF2LQ9ULJ1 636 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 RAB3GAP2Q9H2M9 1393 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 PLS1Q14651 629 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 KIF3CO14782 793 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 HIP1O00291 1037 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 CAMK4Q16566 473 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 SPECC1Q5M775 1068 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 NBPF5PQ86XG9 351 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 PPME1Q9Y570 386 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 ZNF396Q96N95 335 aaPredicted RBP12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 SLC52A1Q9NWF4 448 aa12.88□□□□□ -0.35
CACNA1C-208ENST00000399601 CETN2P41208 172 aa12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 VEZTQ9HBM0 779 aa12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 MROH2BQ7Z745 1585 aa12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 GJC1P36383 396 aa12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 ZNF444Q8N0Y2 327 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 HLTFQ14527 1009 aaKnown RBP eCLIP12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 MAP7D1Q3KQU3 841 aa12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 ZHX1Q9UKY1 873 aaPredicted RBP12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 FAM114A2Q9NRY5 505 aa12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 NOD1Q9Y239 953 aa12.87□□□□□ -0.35
CACNA1C-208ENST00000399601 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 MAFGO15525 162 aa12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 SLU7O95391 586 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 KLHL10Q6JEL2 608 aa12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 ATP2B3Q16720 1220 aa12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 CPLX3Q8WVH0 158 aa12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 CWC25Q9NXE8 425 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 NOL7Q9UMY1 257 aaKnown RBP12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 FYCO1Q9BQS8 1478 aa12.86□□□□□ -0.35
CACNA1C-208ENST00000399601 CEP57L1Q8IYX8 460 aa12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 SLC4A8Q2Y0W8 1093 aa12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 DACH1Q9UI36 760 aa12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 ZNF397Q8NF99 534 aaPredicted RBP12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 CCER2I3L3R5 266 aa12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 FRMD4BQ9Y2L6 1034 aa12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 ARHGAP29Q52LW3 1261 aa12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 NOP9Q86U38 636 aaKnown RBP12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
CACNA1C-208ENST00000399601 SPA17Q15506 151 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 FSD2A1L4K1 749 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 GTF2A1P52655 376 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 HSPA2P54652 639 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 CENPQQ7L2Z9 268 aaPredicted RBP12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 WDR66Q8TBY9 1149 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 DIXDC1Q155Q3 683 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 MTERF4Q7Z6M4 381 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 CCDC144CPQ8IYA2 1237 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 PDCD7Q8N8D1 485 aaKnown RBP12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 MIPOL1Q8TD10 442 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
CACNA1C-208ENST00000399601 SETDB2Q96T68 719 aa12.83□□□□□ -0.35
CACNA1C-208ENST00000399601 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 C11orf95C9JLR9 678 aaPredicted RBP12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 GPTP24298 496 aa12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 KIF22Q14807 665 aa12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 CFAP70Q5T0N1 1121 aa12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 TMEM110-MUSTN1A8MSY1 372 aa12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 F8W031 263 aaPredicted RBP12.83□□□□□ -0.36
CACNA1C-208ENST00000399601 SLC5A1P13866 664 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms