RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 ZNF76P36508 570 aa18.67■□□□□ 0.58
ITSN1-209ENST00000399352 CDK19Q9BWU1 502 aa18.67■□□□□ 0.58
ITSN1-209ENST00000399352 SRRTQ9BXP5 876 aaKnown RBP18.67■□□□□ 0.58
ITSN1-209ENST00000399352 CCT2P78371 535 aaKnown RBP18.67■□□□□ 0.58
ITSN1-209ENST00000399352 LRP2BPQ9P2M1 347 aa18.67■□□□□ 0.58
ITSN1-209ENST00000399352 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
ITSN1-209ENST00000399352 ATF3P18847 181 aa18.67■□□□□ 0.58
ITSN1-209ENST00000399352 CABP4P57796 275 aa18.67■□□□□ 0.58
ITSN1-209ENST00000399352 IGSF3O75054 1194 aa18.66■□□□□ 0.58
ITSN1-209ENST00000399352 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
ITSN1-209ENST00000399352 UVSSAQ2YD98 709 aa18.66■□□□□ 0.58
ITSN1-209ENST00000399352 PPP1R12BO60237 982 aaPredicted RBP18.66■□□□□ 0.58
ITSN1-209ENST00000399352 LRSAM1Q6UWE0 723 aa18.66■□□□□ 0.58
ITSN1-209ENST00000399352 TBC1D9Q6ZT07 1266 aa18.66■□□□□ 0.58
ITSN1-209ENST00000399352 VPS36Q86VN1 386 aa18.66■□□□□ 0.58
ITSN1-209ENST00000399352 NFE2L2Q16236 605 aa18.66■□□□□ 0.58
ITSN1-209ENST00000399352 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.66■□□□□ 0.58
ITSN1-209ENST00000399352 V9GYY5 206 aaPredicted RBP18.66■□□□□ 0.58
ITSN1-209ENST00000399352 CEP63Q96MT8 703 aa18.66■□□□□ 0.58
ITSN1-209ENST00000399352 UBA5Q9GZZ9 404 aa18.65■□□□□ 0.58
ITSN1-209ENST00000399352 FCHSD2O94868 740 aa18.65■□□□□ 0.58
ITSN1-209ENST00000399352 TMCO5BA8MYB1 307 aa18.65■□□□□ 0.58
ITSN1-209ENST00000399352 TXNDC2Q86VQ3 553 aa18.65■□□□□ 0.58
ITSN1-209ENST00000399352 NAA15Q9BXJ9 866 aaKnown RBP18.65■□□□□ 0.58
ITSN1-209ENST00000399352 JADE2Q9NQC1 790 aa18.65■□□□□ 0.58
ITSN1-209ENST00000399352 SPG7Q9UQ90 795 aa18.65■□□□□ 0.58
ITSN1-209ENST00000399352 ESCO1Q5FWF5 840 aa18.65■□□□□ 0.58
ITSN1-209ENST00000399352 TBC1D32Q96NH3 1257 aa18.65■□□□□ 0.58
ITSN1-209ENST00000399352 MCM6Q14566 821 aa18.64■□□□□ 0.58
ITSN1-209ENST00000399352 TSG101Q99816 390 aa18.64■□□□□ 0.58
ITSN1-209ENST00000399352 GPRASP1Q5JY77 1395 aa18.64■□□□□ 0.58
ITSN1-209ENST00000399352 PPFIA3O75145 1194 aa18.64■□□□□ 0.57
ITSN1-209ENST00000399352 UBE2HP62256 183 aa18.64■□□□□ 0.57
ITSN1-209ENST00000399352 GOLGA6L9A6NEM1 432 aa18.64■□□□□ 0.57
ITSN1-209ENST00000399352 NEBLO76041 1014 aa18.64■□□□□ 0.57
ITSN1-209ENST00000399352 BTBD11A6QL63 1104 aa18.64■□□□□ 0.57
ITSN1-209ENST00000399352 ALS2CR12Q96Q35 445 aa18.64■□□□□ 0.57
ITSN1-209ENST00000399352 SPECC1LQ69YQ0 1117 aa18.64■□□□□ 0.57
ITSN1-209ENST00000399352 ABCF2Q9UG63 623 aa18.64■□□□□ 0.57
ITSN1-209ENST00000399352 ZBTB9Q96C00 473 aa18.63■□□□□ 0.57
ITSN1-209ENST00000399352 DUSP27Q5VZP5 1158 aa18.63■□□□□ 0.57
ITSN1-209ENST00000399352 CCDC186Q7Z3E2 898 aa18.63■□□□□ 0.57
ITSN1-209ENST00000399352 POTEJP0CG39 1038 aa18.63■□□□□ 0.57
ITSN1-209ENST00000399352 PRPF4BQ13523 1007 aaKnown RBP18.63■□□□□ 0.57
ITSN1-209ENST00000399352 CCDC150Q8NCX0 1101 aa18.63■□□□□ 0.57
ITSN1-209ENST00000399352 MINDY4BA8MYZ0 360 aa18.62■□□□□ 0.57
ITSN1-209ENST00000399352 MTIF2P46199 727 aaKnown RBP18.62■□□□□ 0.57
ITSN1-209ENST00000399352 MCM10Q7L590 875 aa18.62■□□□□ 0.57
ITSN1-209ENST00000399352 CCDC8Q9H0W5 538 aaPredicted RBP18.62■□□□□ 0.57
ITSN1-209ENST00000399352 ARFGAP3Q9NP61 516 aa18.62■□□□□ 0.57
ITSN1-209ENST00000399352 DNAI1Q9UI46 699 aa18.62■□□□□ 0.57
ITSN1-209ENST00000399352 CCDC171Q6TFL3 1326 aa18.62■□□□□ 0.57
ITSN1-209ENST00000399352 DESP17661 470 aa18.62■□□□□ 0.57
ITSN1-209ENST00000399352 LARP1Q6PKG0 1096 aaKnown RBP18.62■□□□□ 0.57
ITSN1-209ENST00000399352 TTC12Q9H892 705 aaPredicted RBP18.62■□□□□ 0.57
ITSN1-209ENST00000399352 SKILP12757 684 aa18.62■□□□□ 0.57
ITSN1-209ENST00000399352 ANAPC15P60006 121 aa18.62■□□□□ 0.57
ITSN1-209ENST00000399352 GIGYF2Q6Y7W6 1299 aaKnown RBP18.62■□□□□ 0.57
ITSN1-209ENST00000399352 STRN4Q9NRL3 753 aa18.62■□□□□ 0.57
ITSN1-209ENST00000399352 F6X3S4 739 aa18.61■□□□□ 0.57
ITSN1-209ENST00000399352 IGF1RP08069 1367 aa18.61■□□□□ 0.57
ITSN1-209ENST00000399352 GOLGA8BA8MQT2 603 aa18.61■□□□□ 0.57
ITSN1-209ENST00000399352 CEP112Q8N8E3 955 aa18.61■□□□□ 0.57
ITSN1-209ENST00000399352 NKTRP30414 1462 aaKnown RBP18.61■□□□□ 0.57
ITSN1-209ENST00000399352 IGHDP01880 384 aa18.61■□□□□ 0.57
ITSN1-209ENST00000399352 KIAA1107Q9UPP5 1409 aa18.61■□□□□ 0.57
ITSN1-209ENST00000399352 HOOK3Q86VS8 718 aa18.6■□□□□ 0.57
ITSN1-209ENST00000399352 POLR3DP05423 398 aaPredicted RBP18.6■□□□□ 0.57
ITSN1-209ENST00000399352 ZKSCAN5Q9Y2L8 839 aa18.6■□□□□ 0.57
ITSN1-209ENST00000399352 STAMBPO95630 424 aa18.6■□□□□ 0.57
ITSN1-209ENST00000399352 HSPA4P34932 840 aa18.6■□□□□ 0.57
ITSN1-209ENST00000399352 AFAP1Q8N556 730 aa18.6■□□□□ 0.57
ITSN1-209ENST00000399352 ZSCAN29Q8IWY8 852 aaPredicted RBP18.6■□□□□ 0.57
ITSN1-209ENST00000399352 SERPINA10Q9UK55 444 aa18.6■□□□□ 0.57
ITSN1-209ENST00000399352 LRPPRCP42704 1394 aaKnown RBP18.59■□□□□ 0.57
ITSN1-209ENST00000399352 HSF2BPO75031 334 aa18.59■□□□□ 0.57
ITSN1-209ENST00000399352 RBM5P52756 815 aaKnown RBP eCLIP18.59■□□□□ 0.57
ITSN1-209ENST00000399352 NOP2P46087 812 aaKnown RBP18.59■□□□□ 0.57
ITSN1-209ENST00000399352 MYO1BO43795 1136 aa18.59■□□□□ 0.57
ITSN1-209ENST00000399352 IVLP07476 585 aa18.59■□□□□ 0.57
ITSN1-209ENST00000399352 CFTRP13569 1480 aa18.59■□□□□ 0.57
ITSN1-209ENST00000399352 TRIM27P14373 513 aa18.59■□□□□ 0.57
ITSN1-209ENST00000399352 HSP90AA4PQ58FG1 418 aa18.59■□□□□ 0.57
ITSN1-209ENST00000399352 MICALL1Q8N3F8 863 aa18.59■□□□□ 0.57
ITSN1-209ENST00000399352 HMGB1P09429 215 aaKnown RBP18.58■□□□□ 0.57
ITSN1-209ENST00000399352 IFIT1P09914 478 aaKnown RBP18.58■□□□□ 0.57
ITSN1-209ENST00000399352 TAOK3Q9H2K8 898 aa18.58■□□□□ 0.57
ITSN1-209ENST00000399352 CCDC196A0A1B0GTZ2 297 aa18.58■□□□□ 0.57
ITSN1-209ENST00000399352 CCDC96Q2M329 555 aa18.58■□□□□ 0.57
ITSN1-209ENST00000399352 ALDH1L2Q3SY69 923 aa18.58■□□□□ 0.57
ITSN1-209ENST00000399352 ANO6Q4KMQ2 910 aa18.58■□□□□ 0.57
ITSN1-209ENST00000399352 BMP2KLQ5H9B9 411 aa18.58■□□□□ 0.57
ITSN1-209ENST00000399352 NAPBQ9H115 298 aa18.58■□□□□ 0.57
ITSN1-209ENST00000399352 METTL24Q5JXM2 366 aa18.58■□□□□ 0.56
ITSN1-209ENST00000399352 TSHZ3Q63HK5 1081 aa18.58■□□□□ 0.56
ITSN1-209ENST00000399352 FBF1Q8TES7 1133 aa18.58■□□□□ 0.56
ITSN1-209ENST00000399352 PHAXQ9H814 394 aaKnown RBP18.58■□□□□ 0.56
ITSN1-209ENST00000399352 SLC12A7Q9Y666 1083 aa18.58■□□□□ 0.56
ITSN1-209ENST00000399352 HFM1A2PYH4 1435 aa18.58■□□□□ 0.56
ITSN1-209ENST00000399352 FGFR1OPO95684 399 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms