RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 EIF3JO75822 258 aaKnown RBP15.36■□□□□ 0.05
ITSN1-208ENST00000399349 URI1O94763 535 aaPredicted RBP15.36■□□□□ 0.05
ITSN1-208ENST00000399349 HAND2P61296 217 aa15.36■□□□□ 0.05
ITSN1-208ENST00000399349 POLR3DP05423 398 aaPredicted RBP15.35■□□□□ 0.05
ITSN1-208ENST00000399349 SEPT7Q16181 437 aaKnown RBP15.35■□□□□ 0.05
ITSN1-208ENST00000399349 TRMT112Q9UI30 125 aaKnown RBP15.35■□□□□ 0.05
ITSN1-208ENST00000399349 SSR1P43307 286 aaKnown RBP15.35■□□□□ 0.05
ITSN1-208ENST00000399349 RRAGDQ9NQL2 400 aaPredicted RBP15.35■□□□□ 0.05
ITSN1-208ENST00000399349 RBM27Q9P2N5 1060 aaKnown RBP15.35■□□□□ 0.05
ITSN1-208ENST00000399349 CEBPAP49715 358 aaPredicted RBP15.35■□□□□ 0.05
ITSN1-208ENST00000399349 ISM2Q6H9L7 571 aa15.35■□□□□ 0.05
ITSN1-208ENST00000399349 ZNF213O14771 459 aa15.35■□□□□ 0.05
ITSN1-208ENST00000399349 KIAA0754O94854 1291 aa15.35■□□□□ 0.05
ITSN1-208ENST00000399349 GOLIM4O00461 696 aa15.34■□□□□ 0.05
ITSN1-208ENST00000399349 ANO10Q9NW15 660 aa15.34■□□□□ 0.05
ITSN1-208ENST00000399349 GOLGA8BA8MQT2 603 aa15.34■□□□□ 0.05
ITSN1-208ENST00000399349 C16orf45Q96MC5 204 aaPredicted RBP15.34■□□□□ 0.05
ITSN1-208ENST00000399349 DBF4Q9UBU7 674 aaPredicted RBP15.34■□□□□ 0.05
ITSN1-208ENST00000399349 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
ITSN1-208ENST00000399349 SH2B1Q9NRF2 756 aaPredicted RBP15.34■□□□□ 0.05
ITSN1-208ENST00000399349 PI4KAP2A4QPH2 592 aa15.34■□□□□ 0.05
ITSN1-208ENST00000399349 TRMT1LQ7Z2T5 733 aaKnown RBP15.34■□□□□ 0.05
ITSN1-208ENST00000399349 PI4KAP1Q8N8J0 262 aa15.34■□□□□ 0.05
ITSN1-208ENST00000399349 UBA5Q9GZZ9 404 aa15.33■□□□□ 0.05
ITSN1-208ENST00000399349 MBIPQ9NS73 344 aa15.33■□□□□ 0.05
ITSN1-208ENST00000399349 AMOTL2Q9Y2J4 779 aa15.33■□□□□ 0.05
ITSN1-208ENST00000399349 MATR3P43243 847 aaKnown RBP eCLIP15.33■□□□□ 0.04
ITSN1-208ENST00000399349 CAVIN4Q5BKX8 364 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 TCEANC2Q96MN5 208 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 CEP131Q9UPN4 1083 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 HECW1Q76N89 1606 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 CBX1P83916 185 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 ABCC11Q96J66 1382 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 PHF8Q9UPP1 1060 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 WASLO00401 505 aaPredicted RBP15.33■□□□□ 0.04
ITSN1-208ENST00000399349 IFIT3O14879 490 aaKnown RBP15.33■□□□□ 0.04
ITSN1-208ENST00000399349 ADAMTS2O95450 1211 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 GJB2P29033 226 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 SLC4A8Q2Y0W8 1093 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 UBE3BQ7Z3V4 1068 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 PPP1R42Q7Z4L9 355 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 FSIP1Q8NA03 581 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 CTCFLQ8NI51 663 aaPredicted RBP15.33■□□□□ 0.04
ITSN1-208ENST00000399349 ECHDC1Q9NTX5 307 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 MAP3K2Q9Y2U5 619 aa15.33■□□□□ 0.04
ITSN1-208ENST00000399349 TOP1P11387 765 aaKnown RBP15.32■□□□□ 0.04
ITSN1-208ENST00000399349 SLC12A7Q9Y666 1083 aa15.32■□□□□ 0.04
ITSN1-208ENST00000399349 TAF4BQ92750 862 aa15.32■□□□□ 0.04
ITSN1-208ENST00000399349 ANKIB1Q9P2G1 1089 aa15.32■□□□□ 0.04
ITSN1-208ENST00000399349 MAP3K12Q12852 859 aa15.32■□□□□ 0.04
ITSN1-208ENST00000399349 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
ITSN1-208ENST00000399349 SUPT6HQ7KZ85 1726 aaKnown RBP15.32■□□□□ 0.04
ITSN1-208ENST00000399349 DZIP1Q86YF9 867 aaKnown RBP15.31■□□□□ 0.04
ITSN1-208ENST00000399349 TMCO3Q6UWJ1 677 aa15.31■□□□□ 0.04
ITSN1-208ENST00000399349 SEC63Q9UGP8 760 aaKnown RBP15.31■□□□□ 0.04
ITSN1-208ENST00000399349 CRACR2BQ8N4Y2 399 aaPredicted RBP15.31■□□□□ 0.04
ITSN1-208ENST00000399349 CNNM3Q8NE01 707 aa15.31■□□□□ 0.04
ITSN1-208ENST00000399349 ABCC5O15440 1437 aa15.31■□□□□ 0.04
ITSN1-208ENST00000399349 STX6O43752 255 aa15.31■□□□□ 0.04
ITSN1-208ENST00000399349 PDIA4P13667 645 aaKnown RBP15.31■□□□□ 0.04
ITSN1-208ENST00000399349 TXLNBQ8N3L3 684 aa15.31■□□□□ 0.04
ITSN1-208ENST00000399349 GOLGA8AA7E2F4 631 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 BAG4O95429 457 aaKnown RBP15.3■□□□□ 0.04
ITSN1-208ENST00000399349 AMOTQ4VCS5 1084 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 BMP2KLQ5H9B9 411 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 MICU3Q86XE3 530 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 KIF18AQ8NI77 898 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 SF3B2Q13435 895 aaKnown RBP15.3■□□□□ 0.04
ITSN1-208ENST00000399349 IQCA1Q86XH1 822 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
ITSN1-208ENST00000399349 CCDC196A0A1B0GTZ2 297 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 CHMP4BP1P59074 171 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 CCDC141Q6ZP82 1450 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 DISP3Q9P2K9 1392 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 PCDHB15Q9Y5E8 787 aa15.3■□□□□ 0.04
ITSN1-208ENST00000399349 IFT140Q96RY7 1462 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 TNNT1P13805 278 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 LDHAL6AQ6ZMR3 332 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 CACNA2D4Q7Z3S7 1137 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 NECAB1Q8N987 351 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 CRACR2AQ9BSW2 395 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 USP16Q9Y5T5 823 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 PLB1Q6P1J6 1458 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 ZPR1O75312 459 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 MEIS3Q99687 375 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 LRRC2Q9BYS8 371 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 SPA17Q15506 151 aa15.29■□□□□ 0.04
ITSN1-208ENST00000399349 ZNF397Q8NF99 534 aaPredicted RBP15.29■□□□□ 0.04
ITSN1-208ENST00000399349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.29■□□□□ 0.04
ITSN1-208ENST00000399349 IQCEQ6IPM2 695 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 HYPKQ9NX55 129 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 HCLS1P14317 486 aaPredicted RBP15.28■□□□□ 0.04
ITSN1-208ENST00000399349 CCDC96Q2M329 555 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 DDX46Q7L014 1031 aaKnown RBP15.28■□□□□ 0.04
ITSN1-208ENST00000399349 ZNF444Q8N0Y2 327 aaPredicted RBP15.28■□□□□ 0.04
ITSN1-208ENST00000399349 CCDC148Q8NFR7 591 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 EVI5LQ96CN4 794 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 TBC1D32Q96NH3 1257 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms