RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 MYBBP1AQ9BQG0 1328 aaKnown RBP28.49■■■□□ 2.15
RUNX1-204ENST00000399237 KDM3BQ7LBC6 1761 aa28.47■■■□□ 2.15
RUNX1-204ENST00000399237 N4BP2Q86UW6 1770 aaPredicted RBP28.47■■■□□ 2.15
RUNX1-204ENST00000399237 BTBD11A6QL63 1104 aa28.47■■■□□ 2.15
RUNX1-204ENST00000399237 FKBP8Q14318 412 aa28.47■■■□□ 2.15
RUNX1-204ENST00000399237 COL15A1P39059 1388 aa28.47■■■□□ 2.15
RUNX1-204ENST00000399237 C10orf71Q711Q0 1435 aa28.46■■■□□ 2.15
RUNX1-204ENST00000399237 SENP3-EIF4A1A0A087X0R7 540 aa28.46■■■□□ 2.15
RUNX1-204ENST00000399237 NLGN1Q8N2Q7 840 aa28.46■■■□□ 2.15
RUNX1-204ENST00000399237 ATP10DQ9P241 1426 aa28.45■■■□□ 2.15
RUNX1-204ENST00000399237 RTF1Q92541 710 aaKnown RBP28.45■■■□□ 2.14
RUNX1-204ENST00000399237 PRAMEF22A3QJZ6 481 aa28.44■■■□□ 2.14
RUNX1-204ENST00000399237 HTATSF1O43719 755 aaKnown RBP28.44■■■□□ 2.14
RUNX1-204ENST00000399237 PXDNLA1KZ92 1463 aa28.44■■■□□ 2.14
RUNX1-204ENST00000399237 SCN7AQ01118 1682 aa28.43■■■□□ 2.14
RUNX1-204ENST00000399237 DDR1Q08345 913 aa28.43■■■□□ 2.14
RUNX1-204ENST00000399237 CANXP27824 592 aaKnown RBP28.42■■■□□ 2.14
RUNX1-204ENST00000399237 NFE2L2Q16236 605 aa28.42■■■□□ 2.14
RUNX1-204ENST00000399237 USPL1Q5W0Q7 1092 aa28.42■■■□□ 2.14
RUNX1-204ENST00000399237 FMNL2Q96PY5 1086 aa28.42■■■□□ 2.14
RUNX1-204ENST00000399237 THUMPD2Q9BTF0 503 aaKnown RBP28.42■■■□□ 2.14
RUNX1-204ENST00000399237 PRKRIP1Q9H875 184 aaPredicted RBP28.42■■■□□ 2.14
RUNX1-204ENST00000399237 BCL2L12Q9HB09 334 aa28.42■■■□□ 2.14
RUNX1-204ENST00000399237 AFDNP55196 1824 aaKnown RBP28.41■■■□□ 2.14
RUNX1-204ENST00000399237 ZEB1P37275 1124 aaPredicted RBP28.41■■■□□ 2.14
RUNX1-204ENST00000399237 BRCA1P38398 1863 aaKnown RBP28.4■■■□□ 2.14
RUNX1-204ENST00000399237 ADCY9O60503 1353 aa28.39■■■□□ 2.14
RUNX1-204ENST00000399237 EIF5P55010 431 aaKnown RBP28.39■■■□□ 2.14
RUNX1-204ENST00000399237 MIS18AQ9NYP9 233 aa28.39■■■□□ 2.14
RUNX1-204ENST00000399237 NRXN2Q9P2S2 1712 aa28.39■■■□□ 2.14
RUNX1-204ENST00000399237 LAMB4A4D0S4 1761 aa28.39■■■□□ 2.13
RUNX1-204ENST00000399237 A1BGP04217 495 aa28.38■■■□□ 2.13
RUNX1-204ENST00000399237 NARFQ9UHQ1 456 aa28.38■■■□□ 2.13
RUNX1-204ENST00000399237 USP16Q9Y5T5 823 aa28.38■■■□□ 2.13
RUNX1-204ENST00000399237 BCORQ6W2J9 1755 aa28.37■■■□□ 2.13
RUNX1-204ENST00000399237 STARD3NLO95772 234 aa28.37■■■□□ 2.13
RUNX1-204ENST00000399237 TM4SF1P30408 202 aa28.37■■■□□ 2.13
RUNX1-204ENST00000399237 PARP3Q9Y6F1 533 aa28.37■■■□□ 2.13
RUNX1-204ENST00000399237 TGFB2P61812 414 aa28.36■■■□□ 2.13
RUNX1-204ENST00000399237 A0A0G2JLW4 131 aa28.35■■■□□ 2.13
RUNX1-204ENST00000399237 POLRMTO00411 1230 aaKnown RBP28.35■■■□□ 2.13
RUNX1-204ENST00000399237 PIP4K2AP48426 406 aaPredicted RBP28.35■■■□□ 2.13
RUNX1-204ENST00000399237 TAF7Q15545 349 aaPredicted RBP28.35■■■□□ 2.13
RUNX1-204ENST00000399237 ZNF526Q8TF50 670 aaPredicted RBP28.35■■■□□ 2.13
RUNX1-204ENST00000399237 GPBP1L1Q9HC44 474 aaPredicted RBP28.35■■■□□ 2.13
RUNX1-204ENST00000399237 MAPK8IP3Q9UPT6 1336 aa28.35■■■□□ 2.13
RUNX1-204ENST00000399237 ZPR1O75312 459 aa28.34■■■□□ 2.13
RUNX1-204ENST00000399237 TEX13AQ9BXU3 409 aaPredicted RBP28.34■■■□□ 2.13
RUNX1-204ENST00000399237 NEFMP07197 916 aa28.33■■■□□ 2.13
RUNX1-204ENST00000399237 CCDC146Q8IYE0 955 aa28.33■■■□□ 2.13
RUNX1-204ENST00000399237 BCS1LQ9Y276 419 aa28.33■■■□□ 2.13
RUNX1-204ENST00000399237 DPEP1P16444 411 aa28.32■■■□□ 2.12
RUNX1-204ENST00000399237 NFIXQ14938 502 aa28.32■■■□□ 2.12
RUNX1-204ENST00000399237 IL6STP40189 918 aaPredicted RBP28.3■■■□□ 2.12
RUNX1-204ENST00000399237 PNNQ9H307 717 aaKnown RBP28.3■■■□□ 2.12
RUNX1-204ENST00000399237 SNRPA1P09661 255 aaKnown RBP28.29■■■□□ 2.12
RUNX1-204ENST00000399237 TMPOP42166 694 aaKnown RBP28.29■■■□□ 2.12
RUNX1-204ENST00000399237 TBC1D2BQ9UPU7 963 aa28.29■■■□□ 2.12
RUNX1-204ENST00000399237 RRP7AQ9Y3A4 280 aaKnown RBP28.29■■■□□ 2.12
RUNX1-204ENST00000399237 ZNF330Q9Y3S2 320 aaPredicted RBP28.29■■■□□ 2.12
RUNX1-204ENST00000399237 KCNA3P22001 575 aa28.28■■■□□ 2.12
RUNX1-204ENST00000399237 RIPK4P57078 832 aa28.28■■■□□ 2.12
RUNX1-204ENST00000399237 ADAMTS8Q9UP79 889 aa28.28■■■□□ 2.12
RUNX1-204ENST00000399237 NBPF26B4DH59 902 aa28.27■■■□□ 2.12
RUNX1-204ENST00000399237 NBPF10Q6P3W6 841 aaKnown RBP28.27■■■□□ 2.12
RUNX1-204ENST00000399237 NBPF15Q8N660 670 aa28.27■■■□□ 2.12
RUNX1-204ENST00000399237 ANKRD31Q8N7Z5 1873 aa28.27■■■□□ 2.12
RUNX1-204ENST00000399237 CARMIL3Q8ND23 1372 aa28.26■■■□□ 2.12
RUNX1-204ENST00000399237 CAMTA2O94983 1202 aa28.25■■■□□ 2.11
RUNX1-204ENST00000399237 EIF4A1P60842 406 aaKnown RBP28.25■■■□□ 2.11
RUNX1-204ENST00000399237 CCDC184Q52MB2 194 aa28.25■■■□□ 2.11
RUNX1-204ENST00000399237 TBC1D9BQ66K14 1250 aa28.25■■■□□ 2.11
RUNX1-204ENST00000399237 DLEC1Q9Y238 1755 aa28.24■■■□□ 2.11
RUNX1-204ENST00000399237 A0A087WZG4 1122 aa28.24■■■□□ 2.11
RUNX1-204ENST00000399237 ARFGEF1Q9Y6D6 1849 aa28.24■■■□□ 2.11
RUNX1-204ENST00000399237 WDR43Q15061 677 aaKnown RBP eCLIP28.23■■■□□ 2.11
RUNX1-204ENST00000399237 BICDL1Q6ZP65 573 aa28.23■■■□□ 2.11
RUNX1-204ENST00000399237 ZNF316A6NFI3 1004 aaPredicted RBP28.22■■■□□ 2.11
RUNX1-204ENST00000399237 SERPINB2P05120 415 aa28.22■■■□□ 2.11
RUNX1-204ENST00000399237 ARHGAP27Q6ZUM4 889 aa28.22■■■□□ 2.11
RUNX1-204ENST00000399237 PNISRQ8TF01 805 aaKnown RBP28.22■■■□□ 2.11
RUNX1-204ENST00000399237 RUNDC1Q96C34 613 aa28.22■■■□□ 2.11
RUNX1-204ENST00000399237 TRIM35Q9UPQ4 493 aa28.22■■■□□ 2.11
RUNX1-204ENST00000399237 CHRNA5P30532 468 aa28.21■■■□□ 2.11
RUNX1-204ENST00000399237 COL11A2P13942 1736 aaPredicted RBP28.21■■■□□ 2.11
RUNX1-204ENST00000399237 NEUROD2Q15784 382 aa28.2■■■□□ 2.1
RUNX1-204ENST00000399237 DZIP3Q86Y13 1208 aaKnown RBP28.2■■■□□ 2.1
RUNX1-204ENST00000399237 PIM2Q9P1W9 311 aa28.19■■■□□ 2.1
RUNX1-204ENST00000399237 DALRD3Q5D0E6 543 aaKnown RBP28.16■■■□□ 2.1
RUNX1-204ENST00000399237 TSPYL4Q9UJ04 414 aa28.16■■■□□ 2.1
RUNX1-204ENST00000399237 KIF3CO14782 793 aa28.15■■■□□ 2.1
RUNX1-204ENST00000399237 CCDC24Q8N4L8 307 aa28.15■■■□□ 2.1
RUNX1-204ENST00000399237 CEP350Q5VT06 3117 aa28.14■■■□□ 2.1
RUNX1-204ENST00000399237 LMOD3Q0VAK6 560 aa28.13■■■□□ 2.09
RUNX1-204ENST00000399237 PRR5LQ6MZQ0 368 aa28.13■■■□□ 2.09
RUNX1-204ENST00000399237 NUP98P52948 1817 aa28.13■■■□□ 2.09
RUNX1-204ENST00000399237 KRT24Q2M2I5 525 aa28.11■■■□□ 2.09
RUNX1-204ENST00000399237 HLFQ16534 295 aa28.1■■■□□ 2.09
RUNX1-204ENST00000399237 C9orf131Q5VYM1 1079 aa28.1■■■□□ 2.09
RUNX1-204ENST00000399237 HSPA6P17066 643 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms